CX069740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069740 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.424e-36 Identity = 67/135 (49.63%), Postives = 101/135 (74.81%), Query Frame = 3 Query: 3 QVVDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDA 407 + +++DGK++K QIWDTAGQERFR +T+AYYRGA+G ++VYDIT SF+++K W+ + H + V RM++GNKCD++ R VS E G+ LA + G+ F+ETSA STNVE AF + R+I + ++RK+ +S++ Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNS 182
BLAST of CX069740 vs. ExPASy Swiss-Prot
Match: RAB8B_MOUSE (Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.424e-36 Identity = 67/135 (49.63%), Postives = 101/135 (74.81%), Query Frame = 3 Query: 3 QVVDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDA 407 + +++DGK++K QIWDTAGQERFR +T+AYYRGA+G ++VYDIT SF+++K W+ + H + V RM++GNKCD++ R VS E G+ LA + G+ F+ETSA STNVE AF + R+I + ++RK+ +S++ Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNS 182
BLAST of CX069740 vs. ExPASy Swiss-Prot
Match: YPT31_YEAST (GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae GN=YPT31 PE=1 SV=3) HSP 1 Score: 150.984 bits (380), Expect = 4.472e-36 Identity = 73/128 (57.03%), Postives = 94/128 (73.44%), Query Frame = 3 Query: 3 QVVDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISR 386 + ++IDGK +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI++ SS+ + WL EL + D V L+GNK DL +R V TEE K+ A+E L F ETSAL+S NV+ AFE +I IY +S+ Sbjct: 53 RTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSK 180
BLAST of CX069740 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 7.628e-36 Identity = 76/167 (45.51%), Postives = 106/167 (63.47%), Query Frame = 3 Query: 3 QVVDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKV--LNSDAYKAELSVNRVTLVKDGANSSKGSMMDFSCC 497 ++++IDGK++K QIWDTAGQE FR++T +YYRGA GAL+VYDITRR +FN + WLE+ H + + ML+GNKCDL R V+TEEG+ A+E GL F+ETSA + NVE AF +EIY I V +++++Y ++ A +G S C Sbjct: 46 RMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYGIKVGYGAGNAGPQAAKPGEGDARKSSSC 212
BLAST of CX069740 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 9.963e-36 Identity = 78/171 (45.61%), Postives = 111/171 (64.91%), Query Frame = 3 Query: 3 QVVDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKV--LNSDAYKAELSVNRVTLVKDGANSSKGSMMDF----SCC 497 ++V+IDGK++K QIWDTAGQE FR++T +YYRGA GAL+VYDITRR +FN + WLE+ H + + ML+GNK DL+S RDV EEG++ A E GL FMETSA + NVE AF +EIY I + + ++++A ++ + G ++S+ + D CC Sbjct: 46 RMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 216
BLAST of CX069740 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.301e-35 Identity = 66/135 (48.89%), Postives = 100/135 (74.07%), Query Frame = 3 Query: 3 QVVDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDA 407 + +++DGK++K QIWDTAGQERFR +T+AYYRGA+G ++VYDIT SF+++K W+ + H + V RM++GNKCD++ R VS E G+ LA + G+ F+ETSA S NVE AF + R+I + ++RK+ +S++ Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNS 182
BLAST of CX069740 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.899e-35 Identity = 71/132 (53.79%), Postives = 94/132 (71.21%), Query Frame = 3 Query: 3 QVVDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLN 398 ++++IDGK++K QIWDTAGQE FR++T +YYRGA GAL+VYDITRR +FN + WLE+ H + + ML+GNKCDL R V+TEEG+ A+E GL F+ETSA + NVE AF +EIY I V + Sbjct: 46 RMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFD 177
BLAST of CX069740 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.786e-35 Identity = 71/128 (55.47%), Postives = 93/128 (72.66%), Query Frame = 3 Query: 3 QVVDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISR 386 ++V+IDGK++K QIWDTAGQE FR++T +YYRGA GAL+VYDITRR +FN + WLE+ H + + ML+GNK DL+S RDV EEG++ A E GL FMETSA + NVE A+ +EIY I + Sbjct: 46 RMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIYRKIQQ 173
BLAST of CX069740 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.458e-35 Identity = 65/135 (48.15%), Postives = 99/135 (73.33%), Query Frame = 3 Query: 3 QVVDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKVLNSDA 407 + +++DGK++K QIWDTAGQERFR +T+AYYRGA+G ++VYDIT SF+++K W+ + H + V RM++GNKCD++ R VS E G+ LA + G+ F+E SA S NVE AF + R+I + ++RK+ +S++ Sbjct: 48 RTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIMTKLNRKMNDSNS 182
BLAST of CX069740 vs. ExPASy Swiss-Prot
Match: RAB2_LYMST (Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.458e-35 Identity = 75/167 (44.91%), Postives = 105/167 (62.87%), Query Frame = 3 Query: 3 QVVDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRSSFNSVKRWLEELTTHCDTAVGRMLVGNKCDLDSIRDVSTEEGKSLAEEEGLFFMETSALDSTNVEAAFEVVIREIYSNISRKV--LNSDAYKAELSVNRVTLVKDGANSSKGSMMDFSCC 497 +++ IDGK++K QIWDTAGQE FR++T +YYRGA GAL+VYDITRR +FN + WLE+ H ++ + ML+GNK DL++ R+V EEG++ A E GL FMETSA + NVE AF +EIY I V +N++A ++ + G +CC Sbjct: 46 RMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGVFDINNEANGIKIGPQHSPASQSLNVGGSGGNQGGNCC 212 The following BLAST results are available for this feature:
BLAST of CX069740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069740 ID=CX069740; Name=CX069740; organism=Citrus sinensis; type=EST; length=615bpback to top |