DR403997

Overview
NameDR403997
Unique NameDR403997
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403997 vs. ExPASy Swiss-Prot
Match: GUN21_ARATH (Endoglucanase 21 OS=Arabidopsis thaliana GN=KOR3 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.512e-28
Identity = 81/203 (39.90%), Postives = 110/203 (54.19%), Query Frame = 3
Query:  156 NDYHRALHMSILFFEGQRSGRLPPD-QRVKWRRDSALHDGATSG----VDLTGGYYDAGDNVKFGFPMAFTTTMLSWSIIDFGK--NMGPELKYAIKAVKWGTDYLLKA-TAKPGVVYV---QVGDAFS--------DHNCWERPEDMDTLRTAYKIDVSHPGSDVAGETXXXXXXXSIVFRSRDPRYSRLLLSRAIEVFEFA 707
            ++Y  AL  ++ FF  Q+SG+LP +   V WR DS L DG         DL GGYYDAGD++KF FPM++  TMLSWS+I++        EL++  + +KWGTDY LK   +    +YV   QVG   S        DH CW RPED+   RT  +   S   SD+A E        SIVF+  +  YS+ L+  A  ++ FA
Sbjct:  107 DNYTIALRTALKFFNAQQSGKLPKNIYNVSWRHDSCLQDGKGDPGQCYKDLVGGYYDAGDSIKFNFPMSYAMTMLSWSVIEYSAKYQAAGELEHVKELIKWGTDYFLKTFNSSADNIYVMVEQVGSGVSGRGSELHNDHYCWMRPEDIHYKRTVSQCYSS--CSDLAAEMAAALASASIVFKD-NRLYSKNLVHGAKTLYRFA 306          
BLAST of DR403997 vs. ExPASy Swiss-Prot
Match: GUN7_ARATH (Endoglucanase 7 OS=Arabidopsis thaliana GN=KOR2 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.991e-28
Identity = 75/196 (38.27%), Postives = 101/196 (51.53%), Query Frame = 3
Query:  156 NDYHRALHMSILFFEGQRSGRLPPDQRVKWRRDSALHDGATSGVD-LTGGYYDAGDNVKFGFPMAFTTTMLSWSIIDFGKNMG--PELKYAIKAVKWGTDYLL----KATAKPGVVYVQVGDAFSDHN------CWERPEDMDTLRTAYKIDVSHPGSDVAGETXXXXXXXSIVFRSRDPRYSRLLLSRAIEVFEF 704
            ++Y  ALH ++ FF+ Q+SG+LP   +V WR DS   DG    V  L GGYYD G NVKF FPMAF+ TMLSWS+I++        E  +    +KWGTDYLL     +  +   +Y QVG    D        CW++PEDM   R       S   +D+  E        SIVF  + P Y++ L   A  ++ F
Sbjct:  115 DNYTLALHKALQFFDAQKSGKLPKKNKVSWRGDSGTKDGLPDVVGGLVGGYYDGGSNVKFHFPMAFSMTMLSWSLIEYSHKYKAIDEYDHMRDVLKWGTDYLLLTFNNSATRLDHIYTQVGGGLRDSESPDDIYCWQKPEDMSYDRPVLS---STSAADLGAEVSAALAAASIVFTDK-PDYAKKLKKGAETLYPF 306          
BLAST of DR403997 vs. ExPASy Swiss-Prot
Match: GUNX_PRUPE (Endoglucanase CX (Fragment) OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.027e-11
Identity = 34/62 (54.84%), Postives = 41/62 (66.13%), Query Frame = 3
Query:  531 PEDMDTLRTAYKIDVSHPGSDVAGETXXXXXXXSIVFRSRDPRYSRLLLSRAIEVFEFADRH 716
            PEDMDT R  YK+   +PGSDVA ET       SIVF+  DP YS  LL  A++VF+FADR+
Sbjct:    1 PEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASIVFKDSDPSYSGKLLHTAMKVFDFADRY 62          
The following BLAST results are available for this feature:
BLAST of DR403997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
GUN21_ARATH3.512e-2839.90Endoglucanase 21 OS=Arabidopsis thaliana GN=KOR3 P... [more]
GUN7_ARATH5.991e-2838.27Endoglucanase 7 OS=Arabidopsis thaliana GN=KOR2 PE... [more]
GUNX_PRUPE1.027e-1154.84Endoglucanase CX (Fragment) OS=Prunus persica PE=2... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246P07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246P07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403997 ID=DR403997; Name=DR403997; organism=Citrus sinensis; type=EST; length=717bp
GGGGATTGCTCCCCCCACCATTCCCACGCTCTAAACTCCCCCGAGAAACC
AAAANNNCGCGAAACTTACATTCATTCCCGGAAAATGCTCCCCTGCTTNN
NGCTGTTTTCTTCCTGTTCCTGCTTTTCCCTCTCCGTCCAATCAGCGCCA
GCCAGAACGACTACCACAGAGCCCTCCACATGAGCATTCTCTTCTTCGAA
GGCCAACGGTCAGGCCGTCTCCCTCCAGATCAACGCGTAAAATGGCGCCG
CGACTCCGCATTGCACGACGGAGCTACCTCCGGGGTAGACTTAACGGGAG
GTTATTACGACGCCGGAGACAATGTGAAGTTCGGTTTTCCGATGGCGTTC
ACGACGACGATGCTCTCTTGGAGCATTATCGATTTCGGCAAAAACATGGG
GCCAGAGTTAAAGTACGCCATCAAGGCCGTTAAGTGGGGGACAGATTACT
TACTAAAAGCAACGGCGAAGCCTGGCGTCGTTTACGTTCAGGTCGGTGAC
GCTTTCAGTGATCATAACTGCTGGGAGCGCCCTGAGGACATGGATACGCT
GCGAACGGCGTACAAGATCGACGTCTCTCACCCGGGCTCTGACGTGGCAG
GCGAAACGGCCGCAGCACTGGCCGCTGCCTCAATCGTTTTCAGATCACGT
GACCCTAGGTACTCAAGACTTCTGCTCAGTCGCGCCATTGAGGTCTTCGA
GTTTGCTGACAGGCACC
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