CX069711

Overview
NameCX069711
Unique NameCX069711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: P2C70_ORYSJ (Probable protein phosphatase 2C 70 OS=Oryza sativa subsp. japonica GN=Os09g0558000 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.972e-12
Identity = 71/260 (27.31%), Postives = 108/260 (41.54%), Query Frame = 3
Query:   39 TVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSEETASLSMDEEGFETLDTEGDK-------LPEIYXXXXXXXXXXXXXXDKELKLHPAIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISV--------PDIYYRRLTEKDEFVILATDGVWDVISNKEAVEIV 773
            T F G++DGHG  G  V+K     L + +      S+   +          +E   +   + G+  L   GDK       L  I                 E   H       SG+TA   + +  ++++ N GDSR VL+ + +     A  L+ D KPDL  E  RI    G + A        RV      +  L +ARA GD  LK    +          P++   +L+E DEF++LA DG+WD +S++E V+ V
Sbjct:   50 TSFFGVYDGHG--GKAVSKFCAKHLHLQVLKNEAYSSGDLATSVLKSFFRMDE---MMKGQRGWRELAELGDKGQKFTGMLEGIIWSPKPGESDKPEDTWTEEGPHSHFPGPTSGSTACVAIIRNDELIVANAGDSRCVLSRKGR-----AYDLSKDHKPDLDAEKERILNAGGFIVA-------GRV------NGSLNLARAIGDMELKQNEFLPAERQIVTAEPELNTVKLSEDDEFIVLACDGIWDCMSSQEVVDFV 286          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: P2C43_ARATH (Probable protein phosphatase 2C 43 OS=Arabidopsis thaliana GN=At3g17250 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.972e-12
Identity = 54/146 (36.99%), Postives = 74/146 (50.68%), Query Frame = 3
Query:  360 GTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFG--------LISVPDIYYRRLTEKDEFVILATDGVWDVISNKEAVEIV 773
            GTTA+T +  G  +++ NVGD RAVL  + K     AV ++ D K     E  R++   G       E E             LA+ RA GD+ +K F         LIS PDI    LTE+DEF+I+  DGVWDV++++ AV  V
Sbjct:  229 GTTALTALVIGRHLMVANVGDCRAVLCRKGK-----AVDMSFDHKSTFEPERRRVEDLGGYF-----EGEYLY--------GDLAVTRALGDWSIKRFSPLGESLSPLISDPDIQQMILTEEDEFLIMGCDGVWDVMTSQYAVTFV 356          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: P2C06_ORYSJ (Probable protein phosphatase 2C 6 OS=Oryza sativa subsp. japonica GN=Os01g0583100 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.972e-12
Identity = 70/242 (28.93%), Postives = 102/242 (42.15%), Query Frame = 3
Query:   45 FCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSEETASLSMDEEGFETLDTEGDKLPEIYXXXXXXXXXXXXXXDKELKLHPAIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFVILATDGVWDVISNKEAVEI 770
            F G++DGHG  G  VA   R+ L   L  +        S  N       ++     +D   F  +D E                              A+     G+TAV  V     I++ N GDSRAVL   ++      V L+VD KP+   E ARI+   G+V            W        LAM+R+ GD  LK + +I VP+I      + DE ++LA+DG+WDV+SN+E  ++
Sbjct:  200 FFGVYDGHG--GAQVANYCRERLHAALVEELSRIEGSVSGANLGSVEFKKKWEQAFVD--CFSRVDEE---------------------VGGNASRGEAVAPETVGSTAVVAVICSSHIIVANCGDSRAVLCRGKQP-----VPLSVDHKPNREDEYARIEAEGGKVIQ----------WNGYRVFGVLAMSRSIGDRYLKPW-IIPVPEITIVPRAKDDECLVLASDGLWDVMSNEEVCDV 400          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: PP2C3_SCHPO (Protein phosphatase 2C homolog 3 OS=Schizosaccharomyces pombe GN=ptc3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.575e-12
Identity = 49/146 (33.56%), Postives = 74/146 (50.68%), Query Frame = 3
Query:  357 SGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGL-------ISVPDIYYRRLTEKDEFVILATDGVWDVISNKEAVEIV 773
            SG TA  +++ G  +   N GDSR VL ++      +A  L+ D KP    E ARI    G V       +  RV      +  LA++RA GDF  K+  L        ++PD+    +T+ DEFV+LA DG+WD  ++++ +E V
Sbjct:  118 SGCTATVVLRVGNKLYCANAGDSRTVLGSKG-----IAKPLSADHKPSNEAEKARICAAGGFV-------DFGRV------NGNLALSRAIGDFEFKNSNLEPEKQIVTALPDVVVHEITDDDEFVVLACDGIWDCKTSQQVIEFV 245          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: P2C49_ARATH (Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.575e-12
Identity = 55/156 (35.26%), Postives = 81/156 (51.92%), Query Frame = 3
Query:  339 AIDCFCS---GTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNND---SPGLAMARAFGDFCLK-----DFGLISVPDIYYRRLTEKDEFVILATDGVWDVISNKEAVEIV 773
            A DC  S   GTTA+T +  G  +++ N GD RAVL  + +     A+ ++ D KP    E  R+++  G +                ND   +  LA+ RA GD+ LK        LIS P+I    LTE DEF+++  DG+WDV++++EAV IV
Sbjct:  177 AEDCSISDSCGTTALTALICGRLLMVANAGDCRAVLCRKGR-----AIDMSEDHKPINLLERRRVEESGGFI---------------TNDGYLNEVLAVTRALGDWDLKLPHGSQSPLISEPEIKQITLTEDDEFLVIGCDGIWDVLTSQEAVSIV 312          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: PPM1K_BOVIN (Protein phosphatase 1K, mitochondrial OS=Bos taurus GN=PPM1K PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.363e-12
Identity = 53/155 (34.19%), Postives = 85/155 (54.84%), Query Frame = 3
Query:  357 SGTTA-VTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRV-FALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDE-FVILATDGVWDVISNKEAVEIVASAPSQTTAARAL 812
            SGTTA V L++ G ++VI +VGDSRA+L  + K      ++LT+D  P+   E  RI++C G V +    +P V         +  LAM R+ GD  LK  G+I+ P+    +L   D+ F++L TDG+  +++++E  + V        AA A+
Sbjct:  186 SGTTATVALLRDGIELVIASVGDSRAILCRKGK-----PMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHV---------NGRLAMTRSLGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAV 326          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: PPM1B_HUMAN (Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.363e-12
Identity = 60/149 (40.27%), Postives = 77/149 (51.68%), Query Frame = 3
Query:  357 SGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDF---CLKDFG----LISV-PDIYYRRLTEKDEFVILATDGVWDVISNKEAVEIVAS 779
            SG+TAV ++     I   N GDSRAVL      N  V    T D KP  PRE  RIQ   G V        + RV      +  LA++RA GD+   C+   G    L+S  P++Y     E+DEF+ILA DG+WDV+SN+E  E V S
Sbjct:  130 SGSTAVGVMISPKHIYFINCGDSRAVLYR----NGQVCFS-TQDHKPCNPREKERIQNAGGSVM-------IQRV------NGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKS 260          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: P2C02_ORYSJ (Probable protein phosphatase 2C 2 OS=Oryza sativa subsp. japonica GN=Os01g0295700 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.363e-12
Identity = 50/144 (34.72%), Postives = 77/144 (53.47%), Query Frame = 3
Query:  357 SGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLK-----DFGLISVPDIYYRRLTEKDEFVILATDGVWDVISNKEAVEIV 773
            SGTTA+  +  G  +++ N GD RAVL  +      VAV+++ D +P    E  RI +C G +    ++  +  V         L++ RA GD+ +K        LI+ P+     LTE DEF+I+  DG+WDV+S++ AV IV
Sbjct:  177 SGTTALAALIFGRQLLVANAGDCRAVLCRKG-----VAVEMSRDHRPTYDAEHERITECGGYI----EDGYLNGV---------LSVTRALGDWDMKMPQGSRSPLIAEPEFQQTTLTEDDEFLIIGCDGIWDVMSSQHAVTIV 302          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: PPM1K_HUMAN (Protein phosphatase 1K, mitochondrial OS=Homo sapiens GN=PPM1K PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.392e-12
Identity = 52/155 (33.55%), Postives = 85/155 (54.84%), Query Frame = 3
Query:  357 SGTTA-VTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRV-FALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDE-FVILATDGVWDVISNKEAVEIVASAPSQTTAARAL 812
            SGTTA V L++ G ++V+ +VGDSRA+L  + K      ++LT+D  P+   E  RI++C G V +    +P V         +  LAM R+ GD  LK  G+I+ P+    +L   D+ F++L TDG+  +++++E  + V        AA A+
Sbjct:  186 SGTTATVALLRDGIELVVASVGDSRAILCRKGK-----PMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHV---------NGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAV 326          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: P2C42_ORYSJ (Probable protein phosphatase 2C 42 OS=Oryza sativa subsp. japonica GN=Os04g0500900 PE=2 SV=4)

HSP 1 Score: 72.0182 bits (175), Expect = 4.392e-12
Identity = 49/146 (33.56%), Postives = 75/146 (51.37%), Query Frame = 3
Query:  360 GTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFG--------LISVPDIYYRRLTEKDEFVILATDGVWDVISNKEAVEIV 773
            G TA  ++ +   IV+GN GD+R V++   +     A+ L+ D KP+ P E  RI    G V   +    V      NN   G+A++RA GD   K+          L   P+I   +LT+  EF+++A DGVWDV++N+  V+ V
Sbjct:  151 GCTACVVLIRNTQIVVGNAGDARCVISRNGQ-----AIALSNDHKPNFPEETQRIVAAGGSVSFSRGSHRV------NN---GIAVSRAIGDLSYKNNKKLRPEQQLLTCSPEIRADQLTDDTEFLVIACDGVWDVLANQAVVDFV 282          
The following BLAST results are available for this feature:
BLAST of CX069711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
P2C70_ORYSJ1.972e-1227.31Probable protein phosphatase 2C 70 OS=Oryza sativa... [more]
P2C43_ARATH1.972e-1236.99Probable protein phosphatase 2C 43 OS=Arabidopsis ... [more]
P2C06_ORYSJ1.972e-1228.93Probable protein phosphatase 2C 6 OS=Oryza sativa ... [more]
PP2C3_SCHPO2.575e-1233.56Protein phosphatase 2C homolog 3 OS=Schizosaccharo... [more]
P2C49_ARATH2.575e-1235.26Probable protein phosphatase 2C 49 OS=Arabidopsis ... [more]
PPM1K_BOVIN3.363e-1234.19Protein phosphatase 1K, mitochondrial OS=Bos tauru... [more]
PPM1B_HUMAN3.363e-1240.27Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE... [more]
P2C02_ORYSJ3.363e-1234.72Probable protein phosphatase 2C 2 OS=Oryza sativa ... [more]
PPM1K_HUMAN4.392e-1233.55Protein phosphatase 1K, mitochondrial OS=Homo sapi... [more]
P2C42_ORYSJ4.392e-1233.56Probable protein phosphatase 2C 42 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12C11_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12C11-F22-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069711 ID=CX069711; Name=CX069711; organism=Citrus sinensis; type=EST; length=813bp
TTGGAATGTTTGTACAATAGAATTTCAGTTCAAGTGATACGGTATTTTGT
GGGATATTTGACGGTCACGGTCCTTATGGTCATATGGTTGCCAAGAAAGT
ACGGGATTCTCTTCCAGTTATATTGTGCTCCCAGTGGAAAGCTAGCAATG
ATCAGACCAGCTTTGAGAATGCTAATGGAAGTACACATTCTGAGGAAACT
GCATCATTAAGCATGGATGAGGAAGGGTTTGAGACACTGGATACTGAGGG
TGACAAACTCCCTGAGATTTATCTGCCACTTAAGAAATCCATGTTAAAAT
CTTTTAAGTTAATGGATAAGGAATTAAAGTTACATCCAGCAATTGATTGT
TTCTGCAGTGGAACGACTGCTGTTACACTAGTTAAGCAGGGTCCTGATAT
TGTAATTGGAAATGTTGGTGACTCAAGGGCAGTGCTGGCTACAAGAGAAA
AAGACAATTCTTTGGTTGCTGTACAATTGACTGTGGACTTGAAGCCTGAT
CTCCCAAGGGAGGCTGCAAGGATCCAACAATGCAAAGGAAGGGTCTTTGC
ATTGCAGGATGAGCCAGAGGTTGCACGTGTATGGTTGCCAAACAATGATT
CTCCTGGTTTGGCAATGGCTCGAGCATTTGGGGACTTCTGTTTGAAGGAT
TTTGGTTTAATTTCTGTCCCAGATATTTACTATCGTCGCCTTACTGAGAA
AGATGAATTTGTTATTCTTGCCACTGATGGGGTTTGGGATGTCATTTCCA
ATAAGGAAGCTGTGGAGATTGTAGCTTCAGCACCTAGTCAAACTACAGCA
GCCAGAGCTCTTG
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