CX069711

Overview
NameCX069711
Unique NameCX069711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: PPM1K_XENLA (Protein phosphatase 1K, mitochondrial OS=Xenopus laevis GN=ppm1k PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.737e-12
Identity = 49/155 (31.61%), Postives = 81/155 (52.26%), Query Frame = 3
Query:  354 CSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRV-FALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDE-FVILATDGVWDVISNKEAVEIVASAPSQTTAARAL 812
            C  T  V L++ G ++V+ +VGDSRA+L  R K       +LT+D  P+   E  RI++  G V +    +P V         +  LAM R+ GD  LK  G+I+ P+    +L   D+ F++L TDG+  +++++E  +I+        AA+ L
Sbjct:  187 CGTTATVALLRDGIELVVASVGDSRALLCRRGK-----PFKLTIDHTPERKEEKLRIKKSGGFVTWNSLGQPNV---------NGRLAMTRSIGDLDLKSMGVIAEPETKRVKLQHTDDGFLVLTTDGINFIVNSQEICDIINQCHDPKEAAQVL 327          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: PPM1B_BOVIN (Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.737e-12
Identity = 59/149 (39.60%), Postives = 76/149 (51.01%), Query Frame = 3
Query:  357 SGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDF---CLKDFG----LISV-PDIYYRRLTEKDEFVILATDGVWDVISNKEAVEIVAS 779
            SG+TAV ++     I   N GDSRAVL       S      T D KP  PRE  RIQ   G V        + RV      +  LA++RA GD+   C+   G    L+S  P++Y     E+DEF+ILA DG+WDV+SN+E  E V S
Sbjct:  130 SGSTAVGVMISPKHIYFINCGDSRAVLY-----RSGQVCFSTQDHKPCNPREKERIQNAGGSVM-------IQRV------NGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEFVKS 260          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: P2C53_ORYSJ (Probable protein phosphatase 2C 53 OS=Oryza sativa subsp. japonica GN=Os05g0592800 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.492e-12
Identity = 64/241 (26.56%), Postives = 103/241 (42.74%), Query Frame = 3
Query:   45 FCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGSTHSEETASLSMDEEGFETLDTEGDKLPEIYXXXXXXXXXXXXXXDKELKLHPAIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFVILATDGVWDVISNKEAVE 767
            F  ++DGHG  G  VA   R  +  +L  + + + D     + +G    +      +D   F  +D E                             P +     G+TAV  V     +++ N GDSRAVL   ++      + L++D KP+   E ARI+   G+V            W        LAM+R+ GD  LK + +I VP++      + D+ +ILA+DG+WDV+SN+E  +
Sbjct:  175 FFAVYDGHG--GVQVANYCRKRIHAVLTEELRRAEDDACGSDLSGLESKKLWEKAFVD--CFSRVDAE--------------------VGGNAASGAPPVAPDTVGSTAVVAVVCSSHVIVANCGDSRAVLCRGKQP-----LPLSLDHKPNREDEYARIEALGGKVIQ----------WNGYRVLGVLAMSRSIGDKYLKPY-IIPVPEVTVVARAKDDDCLILASDGLWDVMSNEEVCD 375          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: P2C17_ARATH (Probable protein phosphatase 2C 17 OS=Arabidopsis thaliana GN=At1g78200 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.492e-12
Identity = 58/165 (35.15%), Postives = 87/165 (52.73%), Query Frame = 3
Query:  315 DKELKLHPAIDCFCSGTTAVTLVK-QGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFVILATDGVWDVISNKEAVEIVASAPSQTTAAR 806
            D+++      D    G+TAVT +   G  + I NVGDSRA++++R K     A Q++VD  PD   E + I+   G  F      +V RV      +  LA++R FGD  LK + L S P+I    +    +F+ILA+DG+  V+SN+EAV++         AAR
Sbjct:  110 DQKILADNRTDLESGGSTAVTAILINGKALWIANVGDSRAIVSSRGK-----AKQMSVDHDPDDDTERSMIESKGG--FVTNRPGDVPRV------NGLLAVSRVFGDKNLKAY-LNSEPEIKDVTIDSHTDFLILASDGISKVMSNQEAVDVAKKLKDPKEAAR 260          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: PPM1B_RAT (Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.785e-12
Identity = 59/149 (39.60%), Postives = 76/149 (51.01%), Query Frame = 3
Query:  357 SGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDF---CLKDFG----LISV-PDIYYRRLTEKDEFVILATDGVWDVISNKEAVEIVAS 779
            SG+TAV ++     I   N GDSRAVL      N  V    T D KP  P E  RIQ   G V        + RV      +  LA++RA GD+   C+   G    L+S  P++Y     E+DEFV+LA DG+WDV+SN+E  E V S
Sbjct:  130 SGSTAVGVMISPTHIYFINCGDSRAVLCR----NGQVCFS-TQDHKPCNPMEKERIQNAGGSVM-------IQRV------NGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFVVLACDGIWDVMSNEELCEFVNS 260          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: P2C77_ARATH (Protein phosphatase 2C 77 OS=Arabidopsis thaliana GN=ABI2 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.785e-12
Identity = 51/137 (37.23%), Postives = 76/137 (55.47%), Query Frame = 3
Query:  360 GTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFVILATDGVWDVISNKEAVEI 770
            G+T+V  V     I + N GDSRAVL   +       + L+VD KPD   EAARI+   G+V         ARV+        LAM+R+ GD  LK   +I  P++   R  ++D+ +ILA+DG+WDV++N+E  ++
Sbjct:  231 GSTSVVAVVFPTHIFVANCGDSRAVLCRGK-----TPLALSVDHKPDRDDEAARIEAAGGKVIRWNG----ARVF------GVLAMSRSIGDRYLKP-SVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDL 351          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: P2C55_ORYSJ (Probable protein phosphatase 2C 55 OS=Oryza sativa subsp. japonica GN=Os06g0526700 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 9.785e-12
Identity = 52/151 (34.44%), Postives = 83/151 (54.97%), Query Frame = 3
Query:  360 GTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFVILATDGVWDVISNKEAVEIVASAPSQTTAARAL 812
            G+TAV  +  G  + + NVGDSRAV     K     AV L+ D KP+   E  RI+   G V  + D+     +W  +     LA++RAFG+  +K + + + P+I  + + E  E+++LATDG+WDV+ N++AV ++ +      AA  L
Sbjct:  215 GSTAVAAILIGNRLYVANVGDSRAVALKAGK-----AVPLSEDHKPNKKDERKRIEDAGGIV--VSDD-----IWRVDGI---LAVSRAFGNRLMKRY-VKAEPNIQEKVVDEGLEYLVLATDGLWDVMRNEDAVSLLKAQDGPKAAAMKL 349          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: P2C14_ARATH (Probable protein phosphatase 2C 14 OS=Arabidopsis thaliana GN=At1g67820 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 9.785e-12
Identity = 52/145 (35.86%), Postives = 76/145 (52.41%), Query Frame = 3
Query:  357 SGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFVILATDGVWDVISNKEAVEIVASAPSQ 791
            SG   VT V Q  ++++ N+GD RAVL       + VA  LT D KP    E  RI+   G V   Q    V  +         LA++R+ GD  LK + +++ P+     L +  EF++LA+DG+WDV+SN+EAV  V    +Q
Sbjct:  210 SGACCVTAVIQDQEMIVSNLGDCRAVLC-----RAGVAEALTDDHKPGRDDEKERIESQGGYVDNHQGAWRVQGI---------LAVSRSIGDAHLKKW-VVAEPETRVLELEQDMEFLVLASDGLWDVVSNQEAVYTVLHVLAQ 339          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.669e-11
Identity = 50/137 (36.50%), Postives = 71/137 (51.82%), Query Frame = 3
Query:  360 GTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFVILATDGVWDVISNKEAVEI 770
            G+  VT +    ++V+ N GD RAVL+         A  LT D +P    E  RI+   G V           VW        LA++R  GD  LK + +IS P+I   R+  + EF+ILA+DG+WD +SN+EAV+I
Sbjct:  214 GSCCVTALISDGNLVVANAGDCRAVLSVGG-----FAEALTSDHRPSRDDERNRIESSGGYVDTFNS------VWRIQGS---LAVSRGIGDAHLKQW-IISEPEINILRINPQHEFLILASDGLWDKVSNQEAVDI 335          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.847e-11
Identity = 58/149 (38.93%), Postives = 76/149 (51.01%), Query Frame = 3
Query:  357 SGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDF---CLKDFG----LISV-PDIYYRRLTEKDEFVILATDGVWDVISNKEAVEIVAS 779
            SG+TAV ++     +   N GDSRAVL      N  V    T D KP  P E  RIQ   G V        + RV      +  LA++RA GD+   C+   G    L+S  P++Y     E+DEFV+LA DG+WDV+SN+E  E V S
Sbjct:  130 SGSTAVGVMVSPTHMYFINCGDSRAVLCR----NGQVCFS-TQDHKPCNPVEKERIQNAGGSVM-------IQRV------NGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEIVRAEEDEFVVLACDGIWDVMSNEELCEFVKS 260          
The following BLAST results are available for this feature:
BLAST of CX069711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
PPM1K_XENLA5.737e-1231.61Protein phosphatase 1K, mitochondrial OS=Xenopus l... [more]
PPM1B_BOVIN5.737e-1239.60Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2... [more]
P2C53_ORYSJ7.492e-1226.56Probable protein phosphatase 2C 53 OS=Oryza sativa... [more]
P2C17_ARATH7.492e-1235.15Probable protein phosphatase 2C 17 OS=Arabidopsis ... [more]
PPM1B_RAT9.785e-1239.60Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm... [more]
P2C77_ARATH9.785e-1237.23Protein phosphatase 2C 77 OS=Arabidopsis thaliana ... [more]
P2C55_ORYSJ9.785e-1234.44Probable protein phosphatase 2C 55 OS=Oryza sativa... [more]
P2C14_ARATH9.785e-1235.86Probable protein phosphatase 2C 14 OS=Arabidopsis ... [more]
P2C02_ARATH1.669e-1136.50Probable protein phosphatase 2C 2 OS=Arabidopsis t... [more]
PPM1B_MOUSE2.847e-1138.93Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12C11_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12C11-F22-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069711 ID=CX069711; Name=CX069711; organism=Citrus sinensis; type=EST; length=813bp
TTGGAATGTTTGTACAATAGAATTTCAGTTCAAGTGATACGGTATTTTGT
GGGATATTTGACGGTCACGGTCCTTATGGTCATATGGTTGCCAAGAAAGT
ACGGGATTCTCTTCCAGTTATATTGTGCTCCCAGTGGAAAGCTAGCAATG
ATCAGACCAGCTTTGAGAATGCTAATGGAAGTACACATTCTGAGGAAACT
GCATCATTAAGCATGGATGAGGAAGGGTTTGAGACACTGGATACTGAGGG
TGACAAACTCCCTGAGATTTATCTGCCACTTAAGAAATCCATGTTAAAAT
CTTTTAAGTTAATGGATAAGGAATTAAAGTTACATCCAGCAATTGATTGT
TTCTGCAGTGGAACGACTGCTGTTACACTAGTTAAGCAGGGTCCTGATAT
TGTAATTGGAAATGTTGGTGACTCAAGGGCAGTGCTGGCTACAAGAGAAA
AAGACAATTCTTTGGTTGCTGTACAATTGACTGTGGACTTGAAGCCTGAT
CTCCCAAGGGAGGCTGCAAGGATCCAACAATGCAAAGGAAGGGTCTTTGC
ATTGCAGGATGAGCCAGAGGTTGCACGTGTATGGTTGCCAAACAATGATT
CTCCTGGTTTGGCAATGGCTCGAGCATTTGGGGACTTCTGTTTGAAGGAT
TTTGGTTTAATTTCTGTCCCAGATATTTACTATCGTCGCCTTACTGAGAA
AGATGAATTTGTTATTCTTGCCACTGATGGGGTTTGGGATGTCATTTCCA
ATAAGGAAGCTGTGGAGATTGTAGCTTCAGCACCTAGTCAAACTACAGCA
GCCAGAGCTCTTG
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