CX069711

Overview
NameCX069711
Unique NameCX069711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: P2C27_ARATH (Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.847e-11
Identity = 50/143 (34.97%), Postives = 75/143 (52.45%), Query Frame = 3
Query:  357 SGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKD-----FGLISVPDIYYRRLTEKDEFVILATDGVWDVISNKEAVEI 770
            SGTTA+T    G  ++I N GD RAVL  R +     A++L+ D KP+   E  RI++  G V+                 +  L++ARA GD+ +K        L   P++    L+E DEF+I+  DG+WDV+S++ AV I
Sbjct:  182 SGTTALTAFIFGRRLIIANAGDCRAVLGRRGR-----AIELSKDHKPNCTAEKVRIEKLGGVVY-------------DGYLNGQLSVARAIGDWHMKGPKGSACPLSPEPELQETDLSEDDEFLIMGCDGLWDVMSSQCAVTI 306          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: PPM1D_HUMAN (Protein phosphatase 1D OS=Homo sapiens GN=PPM1D PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11
Identity = 52/158 (32.91%), Postives = 83/158 (52.53%), Query Frame = 3
Query:  357 SGTTAVTLVKQGPDIVIGNVGDSRAVLATRE--KDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVA--RVWLPNN----------DSPGLAMARAFG-----DFCLKDFGLISVPDIYYRRL-TEKDEFVILATDGVWDVISNKEAVEI 770
            SGTTA  ++ +G  + + +VGDS  VL  ++  KD+ + AV++T D KP+LP+E  RI+   G V        V   R  L +N            P LA+ARA G     DF   +F +   PD     L  +K +++IL +DG+W++I  ++A+ +
Sbjct:  171 SGTTASVVIIRGMKMYVAHVGDSGVVLGIQDDPKDDFVRAVEVTQDHKPELPKERERIEGLGGSVMNKSGVNRVVWKRPRLTHNGPVRRSTVIDQIPFLAVARALGDLWSYDFFSGEFVVSPEPDTSVHTLDPQKHKYIILGSDGLWNMIPPQDAISM 328          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: P2C58_ORYSJ (Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica GN=Os06g0651600 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11
Identity = 70/269 (26.02%), Postives = 112/269 (41.64%), Query Frame = 3
Query:   33 SDTVFCGIFDGHGPYGHMVAKKVRDSLPVILCSQWKASNDQTSFENANGST-HSEETASLSMDE-----EGFETLDTEGDKLPEIYXXXXXXXXXXXXXXDK--------ELKLHPAIDCFCSGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISV--------PDIYYRRLTEKDEFVILATDGVWDVISNKEAVEIV 773
            +DT F G+FDGHG  G +VAK          C+++       S   + G   ++   A   MDE      G+  L   GDK+ +I                         E   H        G+TA   + +   +V+ N GDSR V++   +     A  L+ D KP+L  E  RI +  G +       ++ RV      +  + ++RA GD   K    +S         PDI    L + D+F++LA DG+WD +S+++ V+ +
Sbjct:   48 NDTSFFGVFDGHG--GRVVAK---------FCAKYLHREVLRSEAYSAGDLGNAAHKAFFRMDEMMRGQRGWRELQALGDKINQISGMIEGLIWSPRGSDSNDQHDDWAFEEGPHSDFAGPTCGSTACVAIVRNSQLVVANAGDSRCVISRNGQ-----AYNLSRDHKPELEAERERILKAGGYI-------QMGRV------NGTINLSRAIGDIEFKQNKFLSPDKQMLTANPDINTVELCDDDDFLVLACDGIWDCMSSQQLVDFI 287          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: P2C39_ARATH (Probable protein phosphatase 2C 39 OS=Arabidopsis thaliana GN=At3g15260 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11
Identity = 59/162 (36.42%), Postives = 84/162 (51.85%), Query Frame = 3
Query:  330 LHPAIDCFCSGTTAVTLVKQG-PDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDIYYRRLTEKDEFVILATDGVWDVISNKEAVEIVASAPSQTTAARAL 812
            L  A D    G+TAVT +      +V+ NVGDSRAV+         VA  L+VD +P++ ++   I+   G  F      +V RV         LA+ARAFGD  LK   L S P +    + +  EF+ILA+DG+W V+SN+EAV+ +        AA+ L
Sbjct:  123 LDKADDLGKGGSTAVTAILINCQKLVVANVGDSRAVICQNG-----VAKPLSVDHEPNMEKD--EIENRGG--FVSNFPGDVPRV------DGQLAVARAFGDKSLK-MHLSSEPYVTVEIIDDDAEFLILASDGLWKVMSNQEAVDSIKGIKDAKAAAKHL 268          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: PP2C2_YEAST (Protein phosphatase 2C homolog 2 OS=Saccharomyces cerevisiae GN=PTC2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.856e-11
Identity = 59/164 (35.98%), Postives = 82/164 (50.00%), Query Frame = 3
Query:  315 DKELKLHPAIDCFCSGTTAVTLV--KQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLIS--------VPDIYYRRLT-EKDEFVILATDGVWDVISNKEAVEIV 773
            D +L   P +    SG TA +++  K    +V GN GDSR VLAT        A  L+ D KP L  E +RI    G V       E+ RV      +  LA++RA GDF  K    +         VPDI    L  ++DEFVILA DG+WD +++++ V++V
Sbjct:  104 DVKLLQDPVMKEDHSGCTATSILVSKSQNLLVCGNAGDSRTVLATDGN-----AKALSYDHKPTLASEKSRIVAADGFV-------EMDRV------NGNLALSRAIGDFEFKSNPKLGPEEQIVTCVPDILEHSLDYDRDEFVILACDGIWDCLTSQDCVDLV 249          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: P2C47_ARATH (Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana GN=At3g51470 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.856e-11
Identity = 49/144 (34.03%), Postives = 78/144 (54.17%), Query Frame = 3
Query:  357 SGTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFG-----LISVPDIYYRRLTEKDEFVILATDGVWDVISNKEAVEIV 773
            SGTTA+T +     ++I N GDSRAVL  R +     A++L+ D KP+   E  RI++  G ++                 +  L++ARA GD+ +K        L   P++    LTE+DE++I+  DG+WDV+S++ AV +V
Sbjct:  165 SGTTALTALILDKTMLIANAGDSRAVLGKRGR-----AIELSKDHKPNCTSERLRIEKLGGVIY-------------DGYLNGQLSVARALGDWHIKGTKGSLCPLSCEPELEEIVLTEEDEYLIMGCDGLWDVMSSQCAVTMV 290          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: P2C13_ARATH (Probable protein phosphatase 2C 13 OS=Arabidopsis thaliana GN=At1g48040 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.856e-11
Identity = 54/145 (37.24%), Postives = 74/145 (51.03%), Query Frame = 3
Query:  360 GTTAVTLVKQGPDIVIGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSPG-LAMARAFGDFCLKD------FGLISVPDIYYRRLTEKDEFVILATDGVWDVISNKEAVEIV 773
            GTTA+T +  G  +++ N GD RAVL  R      VAV ++ D +     E  RI+   G              +  +    G LA+ RA GD+ LK+        LIS P+I    LTE DEF+ILA DG+WDV+S++ AV  V
Sbjct:  187 GTTALTALIIGRHLLVANAGDCRAVLCRRG-----VAVDMSFDHRSTYEPERRRIEDLGG--------------YFEDGYLNGVLAVTRAIGDWELKNPFTDSSSPLISDPEIGQIILTEDDEFLILACDGIWDVLSSQNAVSNV 312          
BLAST of CX069711 vs. ExPASy Swiss-Prot
Match: Y2105_DICDI (Probable protein phosphatase DDB_G0282105 OS=Dictyostelium discoideum GN=DDB_G0282105 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.284e-11
Identity = 49/143 (34.27%), Postives = 78/143 (54.55%), Query Frame = 3
Query:  405 IGNVGDSRAVLATREKDNSLVAVQLTVDLKPDLPREAARIQQCKGRVFALQDEPEVARVWLPNNDSP----GLAMARAFGDFCLKD--FGLISVPDIYYRRL-TEKDEFVILATDGVWDVISNKEAVEIVASAPSQTTAARAL 812
            +GNVGDS A L    +     +++LT D K + P E  RI+                   +P +D+     G+A++R+ G+  +K+   G+IS P I  R L T +D+FVI+A+DG+WDVI+ K+A+E V+S   Q   A ++
Sbjct:  812 VGNVGDSSAFLCRGNE-----SIELTFDHKANDPSEKQRIKD----------------QGIPVSDNQTRINGVAVSRSLGNHFIKEQNIGMISTPHISNRYLLTPQDKFVIIASDGLWDVINGKDAIEKVSSLYDQGATADSM 933          
The following BLAST results are available for this feature:
BLAST of CX069711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
P2C27_ARATH2.847e-1134.97Probable protein phosphatase 2C 27 OS=Arabidopsis ... [more]
PPM1D_HUMAN3.718e-1132.91Protein phosphatase 1D OS=Homo sapiens GN=PPM1D PE... [more]
P2C58_ORYSJ3.718e-1126.02Probable protein phosphatase 2C 58 OS=Oryza sativa... [more]
P2C39_ARATH3.718e-1136.42Probable protein phosphatase 2C 39 OS=Arabidopsis ... [more]
PP2C2_YEAST4.856e-1135.98Protein phosphatase 2C homolog 2 OS=Saccharomyces ... [more]
P2C47_ARATH4.856e-1134.03Probable protein phosphatase 2C 47 OS=Arabidopsis ... [more]
P2C13_ARATH4.856e-1137.24Probable protein phosphatase 2C 13 OS=Arabidopsis ... [more]
Y2105_DICDI8.284e-1134.27Probable protein phosphatase DDB_G0282105 OS=Dicty... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12C11_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12C11-F22-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069711 ID=CX069711; Name=CX069711; organism=Citrus sinensis; type=EST; length=813bp
TTGGAATGTTTGTACAATAGAATTTCAGTTCAAGTGATACGGTATTTTGT
GGGATATTTGACGGTCACGGTCCTTATGGTCATATGGTTGCCAAGAAAGT
ACGGGATTCTCTTCCAGTTATATTGTGCTCCCAGTGGAAAGCTAGCAATG
ATCAGACCAGCTTTGAGAATGCTAATGGAAGTACACATTCTGAGGAAACT
GCATCATTAAGCATGGATGAGGAAGGGTTTGAGACACTGGATACTGAGGG
TGACAAACTCCCTGAGATTTATCTGCCACTTAAGAAATCCATGTTAAAAT
CTTTTAAGTTAATGGATAAGGAATTAAAGTTACATCCAGCAATTGATTGT
TTCTGCAGTGGAACGACTGCTGTTACACTAGTTAAGCAGGGTCCTGATAT
TGTAATTGGAAATGTTGGTGACTCAAGGGCAGTGCTGGCTACAAGAGAAA
AAGACAATTCTTTGGTTGCTGTACAATTGACTGTGGACTTGAAGCCTGAT
CTCCCAAGGGAGGCTGCAAGGATCCAACAATGCAAAGGAAGGGTCTTTGC
ATTGCAGGATGAGCCAGAGGTTGCACGTGTATGGTTGCCAAACAATGATT
CTCCTGGTTTGGCAATGGCTCGAGCATTTGGGGACTTCTGTTTGAAGGAT
TTTGGTTTAATTTCTGTCCCAGATATTTACTATCGTCGCCTTACTGAGAA
AGATGAATTTGTTATTCTTGCCACTGATGGGGTTTGGGATGTCATTTCCA
ATAAGGAAGCTGTGGAGATTGTAGCTTCAGCACCTAGTCAAACTACAGCA
GCCAGAGCTCTTG
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