CX069706

Overview
NameCX069706
Unique NameCX069706
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.657e-33
Identity = 61/128 (47.66%), Postives = 80/128 (62.50%), Query Frame = -2
Query:  455 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIIDATEAANFTVSNFLSGDNWLPQTGVPY 838
            A GR DP ++TG  +  CTI    D  +  +  +TYLGRPWKEYSRT+ M TF+   + P GW  W G+F L+TL+Y+E  NTGPG+  T RVTWPG   +   E   FT + ++ GD W+P  GVPY
Sbjct:  431 AHGRKDPRESTGFVLQGCTIVGEPDYLAVKEQSKTYLGRPWKEYSRTIIMNTFIPDFVPPEGWQPWLGEFGLNTLFYSEVQNTGPGAAITKRVTWPGIKKLSDEEILKFTPAQYIQGDAWIPGKGVPY 558          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.238e-33
Identity = 64/130 (49.23%), Postives = 82/130 (63.08%), Query Frame = -2
Query:  449 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIIDATEAANFTVSNFLSGDNWLPQTGVPYNG 838
            AQGR+D  ++TG  + NC I             + YLGRPWKE+SRT+ M T +D +I+PAGW  W+GDFAL+TLYYAEY N GPGS+   RV WPG   +   +A  FT + FL G+ W+P   VPY G
Sbjct:  439 AQGRSDKRESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVIDPAGWLPWNGDFALNTLYYAEYENNGPGSNQAQRVKWPGIKKLSPKQALRFTPARFLRGNLWIPPNRVPYMG 568          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.815e-32
Identity = 64/131 (48.85%), Postives = 91/131 (69.47%), Query Frame = -2
Query:  455 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWS--GDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIID-ATEAANFTVSNFLSGDNWLPQTGVPY 838
            AQGRTD  QNTG SIHN  I  + DL    ++V+TY+GRPW  YSRTV ++T++DS+++P GW  W+    + L TL+YAEY N GP S T  RV W G+H++  A++A+ F+V  F++G  WLP +G+P+
Sbjct:  406 AQGRTDLFQNTGISIHNSIIIPAPDLKPVVRSVKTYMGRPWMMYSRTVVLKTYIDSVVSPVGWSPWTKGSTYGLDTLFYAEYKNIGPASSTRWRVRWKGFHVLSKASDASAFSVGKFIAGTAWLPGSGIPF 536          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.896e-32
Identity = 65/129 (50.39%), Postives = 85/129 (65.89%), Query Frame = -2
Query:  455 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIIDAT-EAANFTVSNFLSGDNWLPQTGVPY 838
            AQGR +  + TG SI +  I A+ DL       + YLGRPW+ YSRTV M++F+D L++PAGW  W  DFAL TLYY EY N GPGS+ TNRV WPG+  I+   EA+ F+V  F+ G+ WL  T +P+
Sbjct:  386 AQGRENSREPTGISIISSRILAAPDLIPVQANFKAYLGRPWQLYSRTVIMKSFIDDLVDPAGWLKWKDDFALETLYYGEYMNEGPGSNMTNRVQWPGFKRIETVEEASQFSVGPFIDGNKWLNSTRIPF 514          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.942e-30
Identity = 60/132 (45.45%), Postives = 85/132 (64.39%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHII-DATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQ R   +  +G SI NC I AS+DL +   TV+TYLGRPW+ +S    +Q+F+  L++PAGW  W G+  LSTL+Y EY N GPG+ T+ RV W G+ ++ D  +A  FTV+  L G+ WL ++ +PY  G
Sbjct:  394 AQSRETKDDKSGFSIQNCNITASSDLDTA--TVKTYLGRPWRIFSTVAVLQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKESRIPYKSG 523          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.455e-30
Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = -2
Query:  461 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDW-SGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYH-IIDATEAANFTVSNFLSGDNWLPQTGV 838
            AQG+ DPNQ++G SI  CTI A+     G+    TYLGRPWKE+S TV M+T + +++ P+GW  W SG    +++ Y EY NTGPGSD T RV W GY  ++   EAA FTV+  L G +W+P TGV
Sbjct:  459 AQGKKDPNQSSGMSIQRCTISAN-----GNVIAPTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATGV 581          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.101e-29
Identity = 59/132 (44.70%), Postives = 84/132 (63.64%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHII-DATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQ R   +  +G SI NC I  S+DL +   TV+TYLGRPW+ +S    +Q+F+  L++PAGW  W G+  LSTL+Y EY N GPG+ T+ RV W G+ ++ D  +A  FTV+  L G+ WL ++ +PY  G
Sbjct:  367 AQSRATKDVKSGFSIQNCNITTSSDLDTA--TVKTYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPWKGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKKATEFTVAKLLDGETWLKESRIPYESG 496          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.184e-29
Identity = 60/132 (45.45%), Postives = 84/132 (63.64%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHII-DATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQ R   +  +G +I  C I AS+DL   + TV+TYLGRPW+ +S    MQ+F+  L++PAGW  W G+  LSTL+Y EY N GPG+ T+ RV W G+ ++ D  +A  FTV+  L G+ WL +T +PY  G
Sbjct:  394 AQSRAFKDIYSGFTIQKCNITASSDL--DTTTVKTYLGRPWRIFSTVAVMQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKETRIPYESG 523          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.464e-29
Identity = 62/132 (46.97%), Postives = 80/132 (60.61%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDW-SGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIIDATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGR D  Q TG  IHNCT+  + DL       ++YLGRPWK +SRTV M++ ++ +I+P GW  W   DFA+ TL YAEY N GP   T  RV WPG+ +++  EA  FTV  FL G+ W+   G P   G
Sbjct:  475 AQGRVDKFQTTGFVIHNCTVAPNEDLKPVKAQFKSYLGRPWKPHSRTVVMESTIEDVIDPVGWLRWQETDFAIDTLSYAEYKNDGPSGATAARVKWPGFRVLNKEEAMKFTVGPFLQGE-WIQAIGSPVKLG 605          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.076e-28
Identity = 67/133 (50.38%), Postives = 85/133 (63.91%), Query Frame = -2
Query:  458 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSG--DFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIIDA-TEAANFTVSNFLSG-DNWLPQT--GVP 838
            A+G  + NQNTG SIH CTI  +     G+ T  TYLGRPWK +S+TV MQ+ + S +NPAGW  W+   D    T++Y EY N+GPGSD + RV W GY  I +  EAA FTV  FL G DNW+P+   G+P
Sbjct:  839 AEGTQEANQNTGISIHQCTISPN-----GNVTATTYLGRPWKLFSKTVIMQSVIGSFVNPAGWIAWNSTYDPPPRTIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTVKYFLRGDDNWIPKAVMGMP 966          
The following BLAST results are available for this feature:
BLAST of CX069706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PME28_ARATH3.657e-3347.66Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME58_ARATH6.238e-3349.23Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME60_ARATH1.815e-3248.85Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME40_ARATH6.896e-3250.39Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME42_ARATH4.942e-3045.45Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME1_ARATH6.455e-3050.00Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME30_ARATH1.101e-2944.70Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]
PME19_ARATH4.184e-2945.45Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME45_ARATH5.464e-2946.97Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME26_ARATH2.076e-2850.38Putative pectinesterase/pectinesterase inhibitor 2... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_12C09_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12C09-F18-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069706 ID=CX069706; Name=CX069706; organism=Citrus sinensis; type=EST; length=839bp
CTCGAGAGCCAAAAATTTCTTCTTCAAATGGGCTATTTGCGCATATGTGT
TAACAATAAAACGTTAACAGAATTAGGATTAATTGTTGACAAACTTTAAT
ATTTGTTACCAGAATGATAGAGTTGTGCAAAATTTAGGAAATAAGTAGCA
TAATAAAAAGCAGTAGGGACGATTCACTGTTGCGGATATTTCATCATCAA
TTTCGATAACAACATTATTTAAACATCTTAGTCATTGGAGTACTTCTACT
GCAAAAAAGTTAAAAATAAAAAAAATACAATAGCAGTTCAAATATTAAAT
TTATTGTCAATACAATTGTACATTTGAATAGCTTGTGTATCACACATGAT
TATTGAGTTTGCAAAGCAATTTCCCAAAAAAAAAAAACCGACGAACAGGA
AGCTTCACAAGATGAGTAGCTTAATTAAAAAAATTAACTAATGAAACCAC
CGTTGTAAGGCACTCCAGTTTGCGGTAACCAATTGTCCCCAGACAAGAAA
TTAGAAACGGTGAAATTAGCGGCTTCTGTGGCATCGATGATATGGTAACC
CGGCCAAGTCACCCTATTGGTGGTGTCTGACCCTGGGCCGGTATTATTGT
ACTCGGCATAATACAATGTAGATAGTGCAAAATCGCCGCTCCAATCGTGC
CAACCAGCAGGGTTTATCAAACTATCCATGAAAGTTTGCATGTAAACAGT
TCTAGAGTACTCCTTCCATGGCCTCCCCAGATATGTCTGCACCGTTTGAC
TGCCCGACGCCAGATCATTGGATGCTCTAATTGTGCAATTATGGATGGAC
GTGCCGGTATTCTGGTTAGGATCGGTCCTACCTTGTGCT
back to top