CX069700 | Citrus Genome Database

Overview


Name	CX069700
Unique Name	CX069700
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	909

Libraries


Library Name	Type
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 7.174e-76
Identity = 135/213 (63.38%), Postives = 171/213 (80.28%), Query Frame = -1

Query:  202 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 840
            PKGVLLYGPPG GKTL+A+A+AH  + TFIRV GSELV+KYIGEG+R+V ELF +A+E AP+IIF+DEID+IG+ RM+  +G G+ EV RT+++LL ++DGF+    +KV+ ATNR DILD ALLRPGR DR IE P P+ E RL+ILK+H+RRM L + +DL+ IAE   GASGA+LKA+ TEAGMFA+RERR +VTQEDF  AV KV+  E
Sbjct:  174 PKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTG-GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNE 384

HSP 2 Score: 40.817 bits (94), Expect = 7.174e-76
Identity = 16/27 (59.26%), Postives = 22/27 (81.48%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            ++E IELP+KHPELFE +GI  P+G +
Sbjct:  152 LREAIELPLKHPELFEEVGIDPPKGVL 178

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 2.706e-75
Identity = 129/216 (59.72%), Postives = 174/216 (80.56%), Query Frame = -1

Query:  193 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEK 840
            PKG+LLYGPPGTGKTLLA+AVA  T+ TFIRV GSELV+K+IGEG+ +V+++F +A+E APSIIF+DEID+I + R ++ +G GD EVQRT+++LL ++DGF+A   +K++ ATNR DILD A+LRPGR DR IE P P+E+ RL+ILKIH+R+MNL   ++L++IA+   G  GAELKA+CTEAGM A+RE R +VT +DF  AV K+M+K+  K
Sbjct:  204 PKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTG-GDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVK 418

HSP 2 Score: 43.1282 bits (100), Expect = 2.706e-75
Identity = 17/27 (62.96%), Postives = 23/27 (85.19%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            I+EV+ELP+KHPELFE +GI  P+G +
Sbjct:  182 IREVVELPLKHPELFEKVGIEPPKGIL 208

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 3.529e-75
Identity = 128/215 (59.53%), Postives = 172/215 (80.00%), Query Frame = -1

Query:  196 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 840
            PKGV+LYGPPGTGKTLLA+AVA+ T  TF+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID++G+ R +S SG G+ E+QRTMLELLNQLDGF++   +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++  I  IH+ RM L   ++L ++    +  SGA++KA+CTEAG+ ALRERR+ VT EDF+ +   V+ ++ E
Sbjct:  218 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKE 431

HSP 2 Score: 37.7354 bits (86), Expect = 3.529e-75
Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            IKE +ELP+ HPE +E +GI  P+G I
Sbjct:  196 IKESVELPLTHPEYYEEMGIKPPKGVI 222

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 3.531e-75
Identity = 134/213 (62.91%), Postives = 171/213 (80.28%), Query Frame = -1

Query:  202 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 840
            PKGVLLYGPPG GKTL+A+AVA+H + TFIRV GSELV+K+IGEG+R+V ELF MA+E AP+IIF+DEID+IG+ RM+  +G G+ EV RT+++LL ++DGF+    +KV+ ATNR DILD ALLRPGR DR IE P P+   RL+ILK+H+R+MNL R +DL  IA+   GASGA+LKA+ TEAGMFA+R+RR +VTQEDF  AV KV+  E
Sbjct:  172 PKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMDETTG-GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEILKVHTRKMNL-RNVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQEDFLKAVDKVLGAE 382

HSP 2 Score: 40.817 bits (94), Expect = 3.531e-75
Identity = 15/27 (55.56%), Postives = 22/27 (81.48%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            ++E +ELP+KHPELFE +GI  P+G +
Sbjct:  150 LREAVELPLKHPELFEKVGIEPPKGVL 176

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 4.602e-75
Identity = 130/215 (60.47%), Postives = 171/215 (79.53%), Query Frame = -1

Query:  196 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 840
            PKGV+LYGPPGTGKTLLA+AVA+ T  TF+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++   +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++  I +IH+ RM L   + L  +    +  SGA++KA+CTEAG+ ALRERR+ VT EDF+ +   V+ K+ E
Sbjct:  219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 432

HSP 2 Score: 37.7354 bits (86), Expect = 4.602e-75
Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            IKE +ELP+ HPE +E +GI  P+G I
Sbjct:  197 IKESVELPLTHPEYYEEMGIKPPKGVI 223

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 4.602e-75
Identity = 130/215 (60.47%), Postives = 171/215 (79.53%), Query Frame = -1

Query:  196 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 840
            PKGV+LYGPPGTGKTLLA+AVA+ T  TF+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++   +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++  I +IH+ RM L   + L  +    +  SGA++KA+CTEAG+ ALRERR+ VT EDF+ +   V+ K+ E
Sbjct:  219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 432

HSP 2 Score: 37.7354 bits (86), Expect = 4.602e-75
Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            IKE +ELP+ HPE +E +GI  P+G I
Sbjct:  197 IKESVELPLTHPEYYEEMGIKPPKGVI 223

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 4.602e-75
Identity = 130/215 (60.47%), Postives = 171/215 (79.53%), Query Frame = -1

Query:  196 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 840
            PKGV+LYGPPGTGKTLLA+AVA+ T  TF+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++   +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++  I +IH+ RM L   + L  +    +  SGA++KA+CTEAG+ ALRERR+ VT EDF+ +   V+ K+ E
Sbjct:  219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 432

HSP 2 Score: 37.7354 bits (86), Expect = 4.602e-75
Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            IKE +ELP+ HPE +E +GI  P+G I
Sbjct:  197 IKESVELPLTHPEYYEEMGIKPPKGVI 223

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 6.002e-75
Identity = 129/215 (60.00%), Postives = 171/215 (79.53%), Query Frame = -1

Query:  196 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 840
            PKGV+LYGPPGTGKTLLA+AVA+ T  TF+RV GSEL+QKY+G+G ++VRELF +A EH PSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++   +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++  I +IH+ RM L   + L ++    +  SGA++KA+CTEAG+ ALRERR+ VT EDF+ +    + K+TE
Sbjct:  219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENFLYKKTE 432

HSP 2 Score: 37.7354 bits (86), Expect = 6.002e-75
Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            IKE +ELP+ HPE +E +GI  P+G I
Sbjct:  197 IKESVELPLTHPEYYEEMGIKPPKGVI 223

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 8.546e-74
Identity = 127/215 (59.07%), Postives = 173/215 (80.47%), Query Frame = -1

Query:  196 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 840
            PKGV+LYG PGTGKTLLA+AVA+ T  TF+R+ GSEL+QKY+G+G +MVRELF +A E+APSI+F+DEID++G+ R +S SG G+ E+QRTMLELLNQLDGF++   +KVLMATNRI+ LD AL+RPGRIDRKIEFP P+E+++  I +IH+ RM L + ++L++     +  SGA++KA+CTEAG+ ALRERR+ VT EDF+ +   V+ ++ E
Sbjct:  222 PKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVLYRKKE 435

HSP 2 Score: 38.5058 bits (88), Expect = 8.546e-74
Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            IKE +ELP+ HPE +E +GI  P+G I
Sbjct:  200 IKEAVELPLTHPEYYEEMGIRPPKGVI 226

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.115e-73
Identity = 134/214 (62.62%), Postives = 166/214 (77.57%), Query Frame = -1

Query:  199 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKET 840
            PKGVLLYGPPGTGKTLLA+AVA+ T  TFIRV GSE VQKYIGEG+R+VRE+F +A+E APSIIF+DE+D+I + R  S + +GD EVQRTM++LL +LDGF+    +KV+ ATNRIDILD A+LRPGR DR IE P P  E R+ I KIH+R+M L   +D K++A    GASGA++KA+CTEAGMFA+RE R  VT  DF  A+ KV+KK T
Sbjct:  175 PKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDT-SGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKVLKKTT 387

HSP 2 Score: 33.113 bits (74), Expect = 1.115e-73
Identity = 13/27 (48.15%), Postives = 19/27 (70.37%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            I+E +ELP+  PELF  +GI  P+G +
Sbjct:  153 IREAVELPLLKPELFAEVGIEPPKGVL 179

The following BLAST results are available for this feature:

BLAST of CX069700 vs. ExPASy Swiss-Prot

BLAST of CX069700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 389


Match Name	E-value	Identity	Description
PSMR_PYRAB	7.174e-76	63.38	Proteasome-activating nucleotidase OS=Pyrococcus a...	[more]
PSMR_METJA	2.706e-75	59.72	Proteasome-activating nucleotidase OS=Methanocaldo...	[more]
PRS4_DROME	3.529e-75	59.53	26S protease regulatory subunit 4 OS=Drosophila me...	[more]
PSMR_THEGJ	3.531e-75	62.91	Proteasome-activating nucleotidase OS=Thermococcus...	[more]
PRS4_RAT	4.602e-75	60.47	26S protease regulatory subunit 4 OS=Rattus norveg...	[more]
PRS4_MOUSE	4.602e-75	60.47	26S protease regulatory subunit 4 OS=Mus musculus ...	[more]
PRS4_HUMAN	4.602e-75	60.47	26S protease regulatory subunit 4 OS=Homo sapiens ...	[more]
PRS4_CHICK	6.002e-75	60.00	26S protease regulatory subunit 4 OS=Gallus gallus...	[more]
PRS4_CAEEL	8.546e-74	59.07	Probable 26S protease regulatory subunit 4 OS=Caen...	[more]
PSMR_ARCFU	1.115e-73	62.62	Proteasome-activating nucleotidase OS=Archaeoglobu...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS08_12C06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12C06-F12-1-5.b, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX069700 ID=CX069700; Name=CX069700; organism=Citrus sinensis; type=EST; length=909bp
CCAAATTTGTTTATCATAAGAGGCTAGAGCGCAAGAAAAGACAACAGTCA
GGCTAAAAGGGCCTATCGTGCAAATGTCCCAGAACACGAGTGAGTGCCGT
TAAGGACTACTTGAATCTTGCTCAGAAAATAAGCAAATACACAGCACAGC
ACATGGAAATGATTACTTCCACAACTTCCGCAAGGACATGTTCTTCTCTG
TTTCTTTCTTCATGACCTTGGCCACTGCCATCTCAAAATCTTCCTGTGTT
ACATGGATCCTTCTCTCTCTTAGAGCAAACATACCGGCTTCTGTGCACAC
AGCCTTAAGCTCCGCACCAGATGCACCATTCATCTTCTCGGCAATCTTCT
TCAAATCAATGCCACGCATTAAATTCATTCTTCTTGAATGAATTTTTAGG
ATATCAAGACGAGACTCTTCATTAGGATTTGGAAATTCAATCTTTCTGTC
AATTCGTCCTGGCCTGAGAAGAGCTTGATCGAGAATATCAATTCGATTTG
TCGCCATGAGAACCTTAATTTTGTTTGATGCTTCAAATCCATCAAGCTGG
TTGAGCAGCTCCAGCATAGTCCTCTGCACCTCACTGTCACCATTTCCGCT
GCCAGATTCCATTCGGGCAGATCCGATACTGTCAATTTCATCCATAAAAA
TGATAGACGGAGCATGTTCCCTTGCCATAACAAAAAGTTCTCTAACCATT
CTGGAGCCTTCTCCAATGTATTTCTGGACTAATTCAGAACCAGAAACCCT
GATGAAAGTACAATCAGTATGATGAGCCACAGCTCTAGCCAACAGTGTTT
TGCCAGTACCAGGTGGTCCATATAGCAATACACCCTTGGGGTTGAGCTAT
TCCAAGAGACTCGAACAATTCGGGATGTTTGATAGGGAGCTCAATGACCT
CCTTGATCT