CX069700 | Citrus Genome Database

Overview


Name	CX069700
Unique Name	CX069700
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	909

Libraries


Library Name	Type
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3)

HSP 1 Score: 258.84 bits (660), Expect = 1.454e-73
Identity = 125/218 (57.34%), Postives = 172/218 (78.90%), Query Frame = -1

Query:  187 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNM 840
            PKGV+LYG PGTGKTLLA+AVA+ T  TF+R+ GSEL+QKY+G+G R+ R++F +A E+APSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF+    +KV+MATN+I+ LD AL+RPGRIDRKI F NP+  ++  IL IH+ +MNL   ++L+ +    +  SGA+++A+CTEAG+ ALRERR+ VT EDF+ A  +VMK + E+N+
Sbjct:  216 PKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNKVEENL 432

HSP 2 Score: 39.6614 bits (91), Expect = 1.454e-73
Identity = 16/27 (59.26%), Postives = 21/27 (77.78%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            IKE +ELP+ HPEL+E +GI  P+G I
Sbjct:  194 IKESVELPLTHPELYEEMGIKPPKGVI 220

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 1.896e-73
Identity = 126/214 (58.88%), Postives = 171/214 (79.91%), Query Frame = -1

Query:  199 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKET 840
            PKGV+LYG PGTGKTLLA+AVA+ T  TF+RV GSEL+QKY+G+G ++VRELF +A E APSI+F+DEID++G+ R +S SG G+ E+QRTMLELLNQLDGF+A   +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+ +++  I +IH+ +MNL   ++L++     +  SGA++KA+CTE+G+ ALRERR+ VT  DF+ A  KV+ ++T
Sbjct:  218 PKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSG-GEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFKKAKEKVLYRKT 430

HSP 2 Score: 39.6614 bits (91), Expect = 1.896e-73
Identity = 16/27 (59.26%), Postives = 21/27 (77.78%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            +KE IELP+ HPEL+E +GI  P+G I
Sbjct:  196 MKEAIELPLTHPELYEEIGIKPPKGVI 222

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 2.473e-73
Identity = 136/211 (64.45%), Postives = 164/211 (77.73%), Query Frame = -1

Query:  208 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 840
            PKGVL YGPPGTGKTLLARAVA+ TD  FIRV GSELVQKY+GEG+RMVRELF MAR     I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A   IKVLMATNR D LD ALLRPGR+DRK+EF  P+ ESR  I KIH+R MN  R I  + +A     ++GA++++VCTEAGM+A+R RR  VT++DF  AV KV+K
Sbjct:  201 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 410

HSP 2 Score: 34.6538 bits (78), Expect = 2.473e-73
Identity = 14/27 (51.85%), Postives = 20/27 (74.07%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            ++EV+ELP+ HPE F  LGI  P+G +
Sbjct:  179 MREVVELPMLHPEKFVKLGIDPPKGVL 205

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 2.473e-73
Identity = 136/211 (64.45%), Postives = 164/211 (77.73%), Query Frame = -1

Query:  208 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 840
            PKGVL YGPPGTGKTLLARAVA+ TD  FIRV GSELVQKY+GEG+RMVRELF MAR     I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A   IKVLMATNR D LD ALLRPGR+DRK+EF  P+ ESR  I KIH+R MN  R I  + +A     ++GA++++VCTEAGM+A+R RR  VT++DF  AV KV+K
Sbjct:  202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 411

HSP 2 Score: 34.6538 bits (78), Expect = 2.473e-73
Identity = 14/27 (51.85%), Postives = 20/27 (74.07%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            ++EV+ELP+ HPE F  LGI  P+G +
Sbjct:  180 MREVVELPMLHPEKFVKLGIDPPKGVL 206

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 5.488e-73
Identity = 124/223 (55.61%), Postives = 177/223 (79.37%), Query Frame = -1

Query:  172 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKL 840
            PKGVLLYGPPGTGKTLLA+AVA+ T+ +F+RV GSELV+K+IGEG+++VR++F +A+E +P IIF+DEID++ S R ES +G GD EVQRT+++LL ++DGF++   +K++ ATNR DILD A+LRPGR DR IE   P+E+ RLDILKIH+ +MNL +G+DL+++A+      GA+LKAVCTEAGMFA+RE R  +  +DF+ A++K+  K+ + +  + +L
Sbjct:  182 PKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTG-GDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNL-KGVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKKEKCSYDMPQL 402

HSP 2 Score: 41.9726 bits (97), Expect = 5.488e-73
Identity = 17/27 (62.96%), Postives = 23/27 (85.19%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            IKEV+ELP+K+PELFE +GI  P+G +
Sbjct:  160 IKEVVELPLKNPELFEKVGIVPPKGVL 186

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 7.155e-73
Identity = 135/211 (63.98%), Postives = 163/211 (77.25%), Query Frame = -1

Query:  208 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 840
            PKGVL YGPPGTGKTLLARAVA+ TD  FIRV GSELVQKY+GEG+RMVRELF MAR     I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A   IKVLMATNR D LD ALLRPGR+DRK+EF  P+ E R  I KIH+R MN  R I  + +A     ++GA++++VCTEAGM+A+R RR  VT++DF  AV KV+K
Sbjct:  202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 411

HSP 2 Score: 34.6538 bits (78), Expect = 7.155e-73
Identity = 14/27 (51.85%), Postives = 20/27 (74.07%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            ++EV+ELP+ HPE F  LGI  P+G +
Sbjct:  180 MREVVELPMLHPEKFVKLGIDPPKGVL 206

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 7.155e-73
Identity = 135/211 (63.98%), Postives = 163/211 (77.25%), Query Frame = -1

Query:  208 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 840
            PKGVL YGPPGTGKTLLARAVA+ TD  FIRV GSELVQKY+GEG+RMVRELF MAR     I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A   IKVLMATNR D LD ALLRPGR+DRK+EF  P+ E R  I KIH+R MN  R I  + +A     ++GA++++VCTEAGM+A+R RR  VT++DF  AV KV+K
Sbjct:  202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 411

HSP 2 Score: 34.6538 bits (78), Expect = 7.155e-73
Identity = 14/27 (51.85%), Postives = 20/27 (74.07%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            ++EV+ELP+ HPE F  LGI  P+G +
Sbjct:  180 MREVVELPMLHPEKFVKLGIDPPKGVL 206

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.217e-72
Identity = 124/223 (55.61%), Postives = 175/223 (78.48%), Query Frame = -1

Query:  172 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKL 840
            PKGVLLYGPPGTGKTLLA+AVA+ T+ +F+RV GSELV+K+IGEG+++VR++F +A+E +P IIF+DEID++ S R ES +G GD EVQRT+++LL ++DGF++   +K++ ATNR DILD A+LRPGR DR IE   P+E+ RLDILKIH+ +MNL +G+DL+++A+      GA+LKAVCTEAGMFA+RE R  +  +DF  A+ K+  K+ + +  + +L
Sbjct:  182 PKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTG-GDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAITKITGKKEKCSYDMPQL 402

HSP 2 Score: 41.9726 bits (97), Expect = 1.217e-72
Identity = 17/27 (62.96%), Postives = 23/27 (85.19%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            IKEV+ELP+K+PELFE +GI  P+G +
Sbjct:  160 IKEVVELPLKNPELFEKVGIVPPKGVL 186

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS7_PONAB (26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 260.766 bits (665), Expect = 1.587e-72
Identity = 136/211 (64.45%), Postives = 164/211 (77.73%), Query Frame = -1

Query:  208 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 840
            PKGVLL+GPPGTGKTL ARAVA+ TD  FIRV GSELVQKY+GEG+RMVRELF MAR     +IF DEID+IG AR + G+G GD+EVQRTMLEL+NQLDGF+    IKVLMATNR D LD AL+RPGR+DRKIEF  P+ E R  ILKIH+R M++ R I  + +A     ++GAE+++VCTEAGMFA+R RR   T++DF  AV KV+K
Sbjct:  209 PKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418

HSP 2 Score: 34.2686 bits (77), Expect = 1.587e-72
Identity = 13/27 (48.15%), Postives = 20/27 (74.07%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            ++EV+E P+ HPE F +LGI  P+G +
Sbjct:  187 LREVVETPLLHPERFVNLGIEPPKGVL 213

[Close]

BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.700e-72
Identity = 123/223 (55.16%), Postives = 176/223 (78.92%), Query Frame = -1

Query:  172 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKL 840
            PKGVLLYGPPGTGKTLLA+AVA+ T+ +F+RV GSELV+K+IGEG+++VR++F +A+E +P IIF+DEID++ S R ES +G GD EVQRT+++LL ++DGF++   +K++ ATNR DILD A+LRPGR DR IE   P+E+ RL+ILKIH+ +MNL +G+DL+++A+      GA+LKAVCTEAGMFA+RE R  +  +DF  A++K+  K+ + +  + +L
Sbjct:  182 PKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTG-GDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAISKITGKKEKCSYDMPQL 402

HSP 2 Score: 41.9726 bits (97), Expect = 2.700e-72
Identity = 17/27 (62.96%), Postives = 23/27 (85.19%), Query Frame = -3

Query:  827 IKEVIELPIKHPELFESLGIAQPQGCI 907
            IKEV+ELP+K+PELFE +GI  P+G +
Sbjct:  160 IKEVVELPLKNPELFEKVGIVPPKGVL 186

The following BLAST results are available for this feature:

BLAST of CX069700 vs. ExPASy Swiss-Prot

BLAST of CX069700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 389


Match Name	E-value	Identity	Description
PRS4_YEAST	1.454e-73	57.34	26S protease regulatory subunit 4 homolog OS=Sacch...	[more]
PRS4_DICDI	1.896e-73	58.88	26S protease regulatory subunit 4 homolog OS=Dicty...	[more]
PRS7_PRUPE	2.473e-73	64.45	26S protease regulatory subunit 7 OS=Prunus persic...	[more]
PRS7A_ARATH	2.473e-73	64.45	26S protease regulatory subunit 7 homolog A OS=Ara...	[more]
PSMR_METM6	5.488e-73	55.61	Proteasome-activating nucleotidase OS=Methanococcu...	[more]
PRS7_SPIOL	7.155e-73	63.98	26S protease regulatory subunit 7 OS=Spinacia oler...	[more]
PRS7_ORYSJ	7.155e-73	63.98	26S protease regulatory subunit 7 OS=Oryza sativa ...	[more]
PSMR_METM5	1.217e-72	55.61	Proteasome-activating nucleotidase OS=Methanococcu...	[more]
PRS7_PONAB	1.587e-72	64.45	26S protease regulatory subunit 7 OS=Pongo abelii ...	[more]
PSMR_METMP	2.700e-72	55.16	Proteasome-activating nucleotidase OS=Methanococcu...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS08_12C06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12C06-F12-1-5.b, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX069700 ID=CX069700; Name=CX069700; organism=Citrus sinensis; type=EST; length=909bp
CCAAATTTGTTTATCATAAGAGGCTAGAGCGCAAGAAAAGACAACAGTCA
GGCTAAAAGGGCCTATCGTGCAAATGTCCCAGAACACGAGTGAGTGCCGT
TAAGGACTACTTGAATCTTGCTCAGAAAATAAGCAAATACACAGCACAGC
ACATGGAAATGATTACTTCCACAACTTCCGCAAGGACATGTTCTTCTCTG
TTTCTTTCTTCATGACCTTGGCCACTGCCATCTCAAAATCTTCCTGTGTT
ACATGGATCCTTCTCTCTCTTAGAGCAAACATACCGGCTTCTGTGCACAC
AGCCTTAAGCTCCGCACCAGATGCACCATTCATCTTCTCGGCAATCTTCT
TCAAATCAATGCCACGCATTAAATTCATTCTTCTTGAATGAATTTTTAGG
ATATCAAGACGAGACTCTTCATTAGGATTTGGAAATTCAATCTTTCTGTC
AATTCGTCCTGGCCTGAGAAGAGCTTGATCGAGAATATCAATTCGATTTG
TCGCCATGAGAACCTTAATTTTGTTTGATGCTTCAAATCCATCAAGCTGG
TTGAGCAGCTCCAGCATAGTCCTCTGCACCTCACTGTCACCATTTCCGCT
GCCAGATTCCATTCGGGCAGATCCGATACTGTCAATTTCATCCATAAAAA
TGATAGACGGAGCATGTTCCCTTGCCATAACAAAAAGTTCTCTAACCATT
CTGGAGCCTTCTCCAATGTATTTCTGGACTAATTCAGAACCAGAAACCCT
GATGAAAGTACAATCAGTATGATGAGCCACAGCTCTAGCCAACAGTGTTT
TGCCAGTACCAGGTGGTCCATATAGCAATACACCCTTGGGGTTGAGCTAT
TCCAAGAGACTCGAACAATTCGGGATGTTTGATAGGGAGCTCAATGACCT
CCTTGATCT