CX069693

Overview
NameCX069693
Unique NameCX069693
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069693 vs. ExPASy Swiss-Prot
Match: SUS1_MAIZE (Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 6.360e-61
Identity = 103/140 (73.57%), Postives = 122/140 (87.14%), Query Frame = 1
Query:    4 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVD 423
            FVQPAFYEAFGLTV+E+MTCGLPT ATCHGGPAEII  GVSG HIDPYH D+ A++++ FF+KC  DPS+W++IS GGL+RIYE+YTWK+YSERL+TL GVYGFWKYVS L+RRETRRY+EMFY LK+R LA  V L+ D
Sbjct:  663 FVQPAFYEAFGLTVIESMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFDKCKADPSYWDEISQGGLQRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASQVPLSFD 802          
BLAST of CX069693 vs. ExPASy Swiss-Prot
Match: SUSY_SOYBN (Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 8.306e-61
Identity = 107/140 (76.43%), Postives = 124/140 (88.57%), Query Frame = 1
Query:    4 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVD 423
            FVQPA YEAFGLTVVEAMTCGLPTFATC+GGPAEII HG SGFHIDPYH D+ A+L+++FFEKC  DP+HW+KIS  GL+RI E+YTW+IYS+RLLTL GVYGFWK+VS LDRRE+RRYLEMFY LK+R LA+SV LA +
Sbjct:  666 FVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVDFFEKCKLDPTHWDKISKAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAAE 805          
BLAST of CX069693 vs. ExPASy Swiss-Prot
Match: SUS1_ORYSJ (Sucrose synthase 1 OS=Oryza sativa subsp. japonica GN=SUS1 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.850e-60
Identity = 106/140 (75.71%), Postives = 122/140 (87.14%), Query Frame = 1
Query:    4 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVD 423
            FVQPAFYEAFGLTVVE+MTCGLPTFAT +GGPAEII +GVSGFHIDPY  D+ + L++EFFEKC  DPSHW KIS GGL+RI E+YTWK+YSERL+TL GVYGFWKYVS L+RRETRRYLEM Y LK+R +A +V LAV+
Sbjct:  671 FVQPAFYEAFGLTVVESMTCGLPTFATAYGGPAEIIVNGVSGFHIDPYQGDKASALLVEFFEKCQEDPSHWTKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVE 810          
BLAST of CX069693 vs. ExPASy Swiss-Prot
Match: SUSY_SOLLC (Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.417e-60
Identity = 108/140 (77.14%), Postives = 121/140 (86.43%), Query Frame = 1
Query:    4 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVD 423
            FVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEII HG SGFHIDPYH +Q A+L+ +FFEKC  +PSHW  IS GGLKRI E+YTW+IYSERLLTLA VYGFWK+VSKLDR E RRYLEMFY LK+R +A++V LA +
Sbjct:  666 FVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAADLLADFFEKCKKEPSHWETISTGGLKRIQEKYTWQIYSERLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805          
BLAST of CX069693 vs. ExPASy Swiss-Prot
Match: SUS2_MAIZE (Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.384e-60
Identity = 104/140 (74.29%), Postives = 123/140 (87.86%), Query Frame = 1
Query:    4 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVD 423
            FVQPAFYEAFGLTVVEAMTCGLPTFAT +GGPAEII HGVSG+HIDPY  D+ + L+++FF+KC  +PSHW+KIS GGL+RI E+YTWK+YSERL+TL GVYGFWKYVS L+RRETRRYLEM Y LK+R +A +V LAV+
Sbjct:  671 FVQPAFYEAFGLTVVEAMTCGLPTFATAYGGPAEIIVHGVSGYHIDPYQGDKASALLVDFFDKCQAEPSHWSKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVE 810          
BLAST of CX069693 vs. ExPASy Swiss-Prot
Match: SUS2_HORVU (Sucrose synthase 2 OS=Hordeum vulgare GN=SS2 PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.032e-60
Identity = 105/140 (75.00%), Postives = 122/140 (87.14%), Query Frame = 1
Query:    4 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVD 423
            FVQPAFYEAFGLTV+EAMTCGLPTFAT +GGPAEII +GVSG+HIDPY  D+ + L++ FF KC  DPSHWNKIS GGL+RI E+YTWK+YSERL+TL+GVYGFWKYVS LDRRETRRYLEM Y LK+R +A +V LAV+
Sbjct:  671 FVQPAFYEAFGLTVIEAMTCGLPTFATAYGGPAEIIVNGVSGYHIDPYQNDKASALLVGFFGKCQEDPSHWNKISQGGLQRIEEKYTWKLYSERLMTLSGVYGFWKYVSNLDRRETRRYLEMLYALKYRKMAATVPLAVE 810          
BLAST of CX069693 vs. ExPASy Swiss-Prot
Match: SUS3_ORYSJ (Sucrose synthase 3 OS=Oryza sativa subsp. japonica GN=SUS3 PE=1 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 9.184e-60
Identity = 103/140 (73.57%), Postives = 122/140 (87.14%), Query Frame = 1
Query:    4 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVD 423
            FVQPA YEAFGLTV+EAMTCGLPTFAT +GGPAEII HGVSG+HIDPY  D+ + L++EFFEKC  DP+HW KIS GGL+RI E+YTWK+YSERL+TL+GVYGFWKYV+ LDRRETRRYLEM Y LK+R +A +V LA++
Sbjct:  671 FVQPALYEAFGLTVIEAMTCGLPTFATAYGGPAEIIVHGVSGYHIDPYQNDKASALLVEFFEKCQEDPNHWIKISQGGLQRIEEKYTWKLYSERLMTLSGVYGFWKYVTNLDRRETRRYLEMLYALKYRKMATTVPLAIE 810          
BLAST of CX069693 vs. ExPASy Swiss-Prot
Match: SUS1_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 9.184e-60
Identity = 108/140 (77.14%), Postives = 120/140 (85.71%), Query Frame = 1
Query:    4 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVD 423
            FVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEII HG SGFHIDPYH +Q A+L+ +FFEKC  DPSHW  IS GGLKRI E+YTW+IYSE LLTLA VYGFWK+VSKLDR E RRYLEMFY LK+R +A++V LA +
Sbjct:  666 FVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAADLLADFFEKCKKDPSHWETISMGGLKRIEEKYTWQIYSESLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805          
BLAST of CX069693 vs. ExPASy Swiss-Prot
Match: SUS1_ARATH (Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1 PE=2 SV=3)

HSP 1 Score: 229.18 bits (583), Expect = 1.566e-59
Identity = 106/141 (75.18%), Postives = 120/141 (85.11%), Query Frame = 1
Query:    4 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVDE 426
            FVQPA YEAFGLTVVEAMTCGLPTFATC GGPAEII HG SGFHIDPYH DQ A+ + +FF KC  DPSHW++IS GGL+RI E+YTW+IYS+RLLTL GVYGFWK+VS LDR E RRYLEMFY LK+R LA++V LA D+
Sbjct:  668 FVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQAVPLAQDD 808          
BLAST of CX069693 vs. ExPASy Swiss-Prot
Match: SUS2_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 7.774e-59
Identity = 108/140 (77.14%), Postives = 120/140 (85.71%), Query Frame = 1
Query:    4 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVD 423
            FVQPAFYEAFGLTVVEAM+CGLPTFAT  GGPAEII HG SGF IDPYH +Q A+L+ +FFEKC  DPSHW  IS+GGLKRI E+YTW+IYS+RLLTLA VYGFWK+VSKLDR E RRYLEMFY LKFR LA+ V LAV+
Sbjct:  666 FVQPAFYEAFGLTVVEAMSCGLPTFATNQGGPAEIIVHGKSGFQIDPYHGEQAADLLADFFEKCKVDPSHWEAISEGGLKRIQEKYTWQIYSDRLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKFRKLAQLVPLAVE 805          
The following BLAST results are available for this feature:
BLAST of CX069693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
SUS1_MAIZE6.360e-6173.57Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1[more]
SUSY_SOYBN8.306e-6176.43Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2[more]
SUS1_ORYSJ1.850e-6075.71Sucrose synthase 1 OS=Oryza sativa subsp. japonica... [more]
SUSY_SOLLC2.417e-6077.14Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1[more]
SUS2_MAIZE5.384e-6074.29Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1[more]
SUS2_HORVU7.032e-6075.00Sucrose synthase 2 OS=Hordeum vulgare GN=SS2 PE=1 ... [more]
SUS3_ORYSJ9.184e-6073.57Sucrose synthase 3 OS=Oryza sativa subsp. japonica... [more]
SUS1_SOLTU9.184e-6077.14Sucrose synthase OS=Solanum tuberosum PE=2 SV=1[more]
SUS1_ARATH1.566e-5975.18Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1... [more]
SUS2_SOLTU7.774e-5977.14Sucrose synthase OS=Solanum tuberosum PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12C02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12C02-F4-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069693 ID=CX069693; Name=CX069693; organism=Citrus sinensis; type=EST; length=677bp
GTTTTTGTGCAGCCTGCTTTCTATGAAGCTTTTGGCCTCACAGTTGTAGA
AGCCATGACTTGCGGGCTTCCTACATTTGCCACTTGTCATGGTGGCCCTG
CAGAGATCATTGAGCATGGTGTTTCAGGATTCCATATTGATCCCTATCAC
CCTGATCAGGTGGCTGAACTTATGATTGAATTCTTTGAAAAATGCTACAA
CGATCCGAGTCACTGGAACAAGATTTCTGATGGAGGGCTGAAACGAATTT
ATGAAAGGTACACATGGAAGATATATTCGGAGAGGCTCCTAACATTAGCT
GGGGTTTATGGCTTCTGGAAATATGTGTCTAAGCTTGACAGAAGAGAGAC
TCGTCGTTATCTTGAGATGTTTTACATTCTCAAGTTCCGTGATCTGGCAA
AGTCCGTCCGGCTAGCTGTTGATGAGCAGAACTGAGCTTCGTCTGCTAAA
GCAGCTTTCTACTTGTTACTCTTTATATGCTTATATATGAAGTTGTTTCT
GTTGTTTTGAACTGTTTTTCATTATGTATTAAATAATGTGTAAACTCCCT
GTCGACGAGTATCAAGCTAAAAGCAGCAGCTTAGACGGGCGTTGCTGTTC
TAACATTCAGCGTGAATTATTATAACGGAAAAATTATAAAATCACAAACT
CTGGTATTTATAAAAAAAAAAAAAAAA
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