CX069693

Overview
NameCX069693
Unique NameCX069693
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069693 vs. ExPASy Swiss-Prot
Match: SUSY_VICFA (Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.858e-58
Identity = 107/141 (75.89%), Postives = 122/141 (86.52%), Query Frame = 1
Query:    4 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVDE 426
            FVQPA YEAFGLTVVEAM  GLPTFAT +GGPAEII HG SGFHIDPYH D+ A+L++EFFEK   DPSHW+KIS GGL+RI E+YTW+IYS+RLLTL GVYGFWK+VS LDR E+RRYLEMFY LK+R LA+SV LAV+E
Sbjct:  666 FVQPAVYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKADPSHWDKISLGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 806          
BLAST of CX069693 vs. ExPASy Swiss-Prot
Match: SUSY_MEDSA (Sucrose synthase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 8.596e-58
Identity = 106/140 (75.71%), Postives = 120/140 (85.71%), Query Frame = 1
Query:    4 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVD 423
            FVQPA YEAFGLTVVEAM  GLPTFAT +GGPAEII HG SGFHIDPYH D+ A+L++EFFEK   DPSHW+KIS GGL+RI E+YTW IYS+RLLTL GVYGFWK+VS LDR E+RRYLEMFY LK+R LA+SV LAV+
Sbjct:  666 FVQPAVYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKADPSHWDKISQGGLQRIEEKYTWTIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805          
BLAST of CX069693 vs. ExPASy Swiss-Prot
Match: SUSY_ALNGL (Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 7.277e-57
Identity = 103/137 (75.18%), Postives = 118/137 (86.13%), Query Frame = 1
Query:   13 PAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVD 423
            PA YEAFGLTVVE+MTCGLPTFATC GGPAEII HG SGFHIDPYH +Q A+L+++FFEK   DPSHW KIS GGL+RI+E+YTWKIYSERLLTL GV  FWK+VS LDR E+RRY+EMFY LK+R LA+SV LAV+
Sbjct:  667 PAIYEAFGLTVVESMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGEQAAQLLVDFFEKTKADPSHWAKISLGGLQRIHEKYTWKIYSERLLTLTGVTAFWKHVSNLDRLESRRYIEMFYALKYRKLAESVPLAVE 803          
BLAST of CX069693 vs. ExPASy Swiss-Prot
Match: SUSY_SACOF (Sucrose synthase (Fragment) OS=Saccharum officinarum GN=SUS1 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.130e-33
Identity = 71/128 (55.47%), Postives = 90/128 (70.31%), Query Frame = 1
Query:    4 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKF 387
            FVQPA YEAF L                   P EII  GVSG HIDPYH D+ A++++ FF+KC  DPS+W++IS GG +RIYE+YTWK+YSERL+TL G YGFW YVSKL+R +T RY++MFY L++
Sbjct:   93 FVQPA-YEAFRLDCDRVHEVRSAKDRDLPWRPCEIIADGVSGLHIDPYHSDKDADILVNFFDKCNADPSYWDEISQGG-QRIYEKYTWKLYSERLMTLTGAYGFWNYVSKLERGDT-RYIDMFYALEY 217          
BLAST of CX069693 vs. ExPASy Swiss-Prot
Match: SPS2_CRAPL (Sucrose-phosphate synthase 2 OS=Craterostigma plantagineum GN=SPS2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.883e-11
Identity = 40/117 (34.19%), Postives = 62/117 (52.99%), Query Frame = 1
Query:    1 VFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTW----KIYSERLLTLAGVYGFWKYVSKLD 339
            VF+ PAF E FGLT++EA   GLP  AT +GGP +I     +G  +DP+  D +A  ++    K  ++ + WN+    GLK I+  ++W    + Y  R+      +  WK  + LD
Sbjct:  591 VFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQDAIANALL----KLVSEKNLWNECRKNGLKNIH-LFSWPEHCRTYLTRVAACRMRHPQWKTDTPLD 702          
The following BLAST results are available for this feature:
BLAST of CX069693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
SUSY_VICFA3.858e-5875.89Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1[more]
SUSY_MEDSA8.596e-5875.71Sucrose synthase OS=Medicago sativa PE=2 SV=1[more]
SUSY_ALNGL7.277e-5775.18Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 S... [more]
SUSY_SACOF1.130e-3355.47Sucrose synthase (Fragment) OS=Saccharum officinar... [more]
SPS2_CRAPL7.883e-1134.19Sucrose-phosphate synthase 2 OS=Craterostigma plan... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12C02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12C02-F4-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069693 ID=CX069693; Name=CX069693; organism=Citrus sinensis; type=EST; length=677bp
GTTTTTGTGCAGCCTGCTTTCTATGAAGCTTTTGGCCTCACAGTTGTAGA
AGCCATGACTTGCGGGCTTCCTACATTTGCCACTTGTCATGGTGGCCCTG
CAGAGATCATTGAGCATGGTGTTTCAGGATTCCATATTGATCCCTATCAC
CCTGATCAGGTGGCTGAACTTATGATTGAATTCTTTGAAAAATGCTACAA
CGATCCGAGTCACTGGAACAAGATTTCTGATGGAGGGCTGAAACGAATTT
ATGAAAGGTACACATGGAAGATATATTCGGAGAGGCTCCTAACATTAGCT
GGGGTTTATGGCTTCTGGAAATATGTGTCTAAGCTTGACAGAAGAGAGAC
TCGTCGTTATCTTGAGATGTTTTACATTCTCAAGTTCCGTGATCTGGCAA
AGTCCGTCCGGCTAGCTGTTGATGAGCAGAACTGAGCTTCGTCTGCTAAA
GCAGCTTTCTACTTGTTACTCTTTATATGCTTATATATGAAGTTGTTTCT
GTTGTTTTGAACTGTTTTTCATTATGTATTAAATAATGTGTAAACTCCCT
GTCGACGAGTATCAAGCTAAAAGCAGCAGCTTAGACGGGCGTTGCTGTTC
TAACATTCAGCGTGAATTATTATAACGGAAAAATTATAAAATCACAAACT
CTGGTATTTATAAAAAAAAAAAAAAAA
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