CX069640
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL11_METJA (50S ribosomal protein L11P OS=Methanocaldococcus jannaschii GN=rpl11p PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.478e-20 Identity = 57/148 (38.51%), Postives = 88/148 (59.46%), Query Frame = -1 Query: 270 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 704 V VTGG A L P IGPLG++ ++ ++I ++T KD++G++V VK+ V K + +P AL+ K L + + GN+TL+ VI+IA + + ++ L VKE+LGTC S+G TV+GKDPK++Q+EI G Sbjct: 8 VLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKT-KDYEGMQVPVKVIVDTETRKFEIEVGIPPTTALIKKELGIETAAHEPRHEVV--GNLTLEQVIKIAKMKKDAMLSYTLKNAVKEVLGTCGSMGVTVEGKDPKEVQKEIDAG 152
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL11_PYRKO (50S ribosomal protein L11P OS=Pyrococcus kodakaraensis GN=rpl11p PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.945e-19 Identity = 55/151 (36.42%), Postives = 92/151 (60.93%), Query Frame = -1 Query: 270 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV----AVVPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 704 V V GG+ L P IGPLGL+ K++ ++I K T K+++G++V VK+ V++ + K +P + L+ K L P K + H GN+T++ VI+IA + + +A +L KE++GT +S+G TV+GKDP+++Q+EI +G Sbjct: 7 VLVEGGKASPGPPLGPAIGPLGLNVKQVVDEINKAT-KEFEGMQVPVKIIVEDPKKKTFRIEVGIPPTSQLIKKELGIP----KGSSEAGHTPAGNLTMEQVIKIAKMKIDQMLAPNLKAAAKEVIGTALSMGVTVEGKDPREVQREIDEG 152
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL11_PYRFU (50S ribosomal protein L11P OS=Pyrococcus furiosus GN=rpl11p PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.846e-19 Identity = 58/150 (38.67%), Postives = 91/150 (60.67%), Query Frame = -1 Query: 270 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ--NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 704 V V GG+ L P IGPLGL+ K++ + I E KD+ G++V VK+ V +Q ++ V VP + L+ K L K + KHN GN+T++ VI+IA + + + +A L KE++GT +S+G TV+GKDP+++Q+EI +G Sbjct: 8 VLVEGGKATPGPPLGPAIGPLGLNVKQVVDKI-NEATKDFAGMQVPVKIIVDPVTKQFEIEVGVPPTSQLIKKELGL----EKGSGEPKHNIVGNLTMEQVIKIAKMKKDQMLALTLKAAAKEVIGTALSMGVTVEGKDPREVQKEIDEG 152
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL11_PYRAB (50S ribosomal protein L11P OS=Pyrococcus abyssi GN=rpl11p PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.560e-19 Identity = 58/150 (38.67%), Postives = 91/150 (60.67%), Query Frame = -1 Query: 270 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ--NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 704 V V GG+ L P IGPLGL+ K++ + I E K++ G++V VK+ V +Q ++ V VP + L+ K L K + KHN GN+T++ VI+IA + R + +A L KE++GT +S+G TV+GKDP+++Q+EI +G Sbjct: 8 VLVEGGKATPGPPLGPAIGPLGLNVKQVVDKI-NEATKEFAGMQVPVKIIVDPVTKQFEIEVGVPPTSQLIKKELGL----EKGSGEPKHNIVGNLTMEQVIKIAKMKRNQMLALTLKAAAKEVIGTALSMGVTVEGKDPREVQREIDEG 152
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL11_THEGJ (50S ribosomal protein L11P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl11p PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18 Identity = 53/149 (35.57%), Postives = 91/149 (61.07%), Query Frame = -1 Query: 270 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV----AVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 704 V V GG+ L P IGPLGL+ K++ ++I K T K+++G++V VK+ V++ + K +P + L+ K L P+ + + GN+T++ VI+IA + + +A L KE++GT +S+G TV+GKDP+++Q+EI +G Sbjct: 7 VLVEGGKASPGPPLGPAIGPLGLNVKQVVDEINKAT-KEFEGMQVPVKIIVEDPKKKTFRIEVGIPPTSQLIKKELGIPKGSSEPVHSPV--GNLTMEQVIKIAKMKIDQMLAPTLKAASKEVIGTALSMGVTVEGKDPREVQREIDEG 152
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL11_THEVO (50S ribosomal protein L11P OS=Thermoplasma volcanium GN=rpl11p PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18 Identity = 54/151 (35.76%), Postives = 90/151 (59.60%), Query Frame = -1 Query: 258 VTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAK----VAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEI 698 V GG+ + P +GPLGL+ ++ ++I ++T K+++G++V V +TV + + K VP +AL+ K L + KK + + GN TL+ + +A P +AKDL V E+LGTCV++G V+GKDPK++Q+ I G ++I Sbjct: 9 VEGGKATTGPPIGPALGPLGLNVAQVVKEINEKT-KEFQGMQVPVTVTVIDPETKKYEITVGVPPTSALLKKELGLEKGASKKKEAVA--GNATLEQIKNVAIKKMPSMLAKDLKSAVLEVLGTCVAMGINVEGKDPKEVQKLIKSGQIKI 156
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL11_HYPBU (50S ribosomal protein L11P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl11p PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18 Identity = 60/150 (40.00%), Postives = 82/150 (54.67%), Query Frame = -1 Query: 270 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVV---PSAAALVIKAL--KEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 704 V+V GGE A LAP I LGL K+ EDI K T K +KG V VKL V + + P+ L++KA+ EP D K G++ + ++EIA + +P AK L VK ILG+ S+G TVDGKDPK + +E+ +G Sbjct: 8 VKVRGGEAKPAPPLAPAIEKLGLDVNKVVEDINKATEK-YKGFEVAVKLIVDENTKEYEIEVKPPTTTELLLKAVGASEPSGDPMHQKI----GDLPFEKIVEIAILKKPSLNAKTLKAAVKTILGSARSIGITVDGKDPKQVTKEVEEG 152
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL11_PYRHO (50S ribosomal protein L11P OS=Pyrococcus horikoshii GN=rpl11p PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-18 Identity = 58/150 (38.67%), Postives = 90/150 (60.00%), Query Frame = -1 Query: 270 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ--NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 704 V V GG+ L P IGPLGL+ K++ + I E K++ G++V VK+ V +Q ++ V VP + L+ K L K + KHN GN+T++ VI+IA + R + +A L KE++GT +S+G TV+GKDP+ +Q+EI +G Sbjct: 8 VLVEGGKATPGPPLGPAIGPLGLNVKQVVDKI-NEATKEFAGMQVPVKIIVDPVTKQFEIEVGVPPTSQLIKKELGL----EKGSGEPKHNIVGNLTMEQVIKIAKMKRSQMLALTLKAAAKEVIGTALSMGVTVEGKDPRIVQREIDEG 152
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL11_METVS (50S ribosomal protein L11P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl11p PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18 Identity = 52/151 (34.44%), Postives = 88/151 (58.28%), Query Frame = -1 Query: 261 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVE 704 + VTGG+ A L P IGPLG++ ++ + I +T KD++G+ V VK+ V+ + V +P A+AL+ K L ++ + GNIT++ +++IA + + +A L KE++GTCVSVG V+GK PK+ Q+ + G+ + Sbjct: 8 ILVTGGKATAGPPLGPAIGPLGVNIMQVVQMINTKT-KDYEGMSVPVKVIVETTKRTFEVEVGIPPASALIKKELGLESGSQEPKHKVA--GNITMEKIVKIAKMKQDAMLAYTLKSAAKEVIGTCVSVGVNVEGKTPKEAQKAVDAGEFD 155
BLAST of CX069640 vs. ExPASy Swiss-Prot
Match: RL11_METKA (50S ribosomal protein L11P OS=Methanopyrus kandleri GN=rpl11p PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18 Identity = 52/147 (35.37%), Postives = 93/147 (63.27%), Query Frame = -1 Query: 270 VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTV--QNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIANVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEITDG 704 V + GG+ L P +GPLG++ +++ E+I ++T KD+KG+ V VK+ V + R+ +V V + +IK+ ++ + ++ + G+++++ VI+IA + ++ DL KEILGTC S+G TV+GKDPK++Q+EI +G Sbjct: 8 VLIEGGKADPGPPLGPALGPLGVNIQEVVEEINRKT-KDFKGMEVPVKIIVDTETREFEVKVGSPPTSAIIKSELGIDKGAHEPRH-ETVGDLSMEQVIKIAKMKFDDLLSYDLKTAAKEILGTCGSMGVTVEGKDPKEVQKEIDEG 152 The following BLAST results are available for this feature:
BLAST of CX069640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069640 ID=CX069640; Name=CX069640; organism=Citrus sinensis; type=EST; length=707bpback to top |