DR403951

Overview
NameDR403951
Unique NameDR403951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 58/225 (25.78%), Postives = 111/225 (49.33%), Query Frame = 1
Query:   37 LKKLXXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIE--------KYAQAIQELAVDLAHKLAESMGLMDSVFQDWPCQFRI----NKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 675
            ++K+   +E+WG F+V+NH +   ++ +M       +D   E   ++T+V  G     P  K        L+   ++        +    P + E +         +Y++ + +L   L   L+E++GL  +  +D  C   +    + Y   P+   + G+  H+D+ FLTIL  D ++GGL+V+     +V V P+PG L+VN+GD+  + +N + ++V+HRV
Sbjct:   81 VEKIGDAAEKWGFFQVINHGIPMDVLEKM-------IDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSPAANWRDTLGCYTAPDPPRPEDLPATCGEMMIEYSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQD-HIGGLQVLHDQ-YWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRV 296          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14
Identity = 58/221 (26.24%), Postives = 107/221 (48.42%), Query Frame = 1
Query:   34 QLKKLXXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIK---RRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQ-RETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQDWPCQFRINKYNFAPESVGSPGVQL----HTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHR 672
            +L K      +WG F+++NH V   ++ +MK    +   LP + K   R+  + + G G    T +    +   ++ + +             SP   RET+EKY+  +Q++A+ L   +A+++GL   +    P +   N+ +    S+ S G  L    H+D+  LT+L     V GL +  +   +VP+ P+ G  +VN+GD+  + SNG   +++HR
Sbjct:   68 ELAKFHSACLDWGFFQLINHGVREEVIEKMKVDTEDFFRLPFKEKNAYRQLPNGMEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTK-PLRTVFNREDELLPSMSSCGEGLGLSPHSDATGLTLLIQVNEVNGLHIK-KDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHR 286          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.127e-13
Identity = 59/228 (25.88%), Postives = 112/228 (49.12%), Query Frame = 1
Query:   37 LKKLXXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAV----ADFCSHLDASPHQ-------RETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQDWPCQFRI----NKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 675
            ++++   + +WG F+V+NH VS  L+ +MK+ V +  +   E+++          Y     +  LY  L  +D+ SS A        C+    +P         R+ + +Y++ +  L   L   L+E++GL  +   D  C   +    + Y   PE   + G   H+D+ FLT+L  D+ + GL+V  R G +  V  + G L++N+GD+  + +N + ++++HRV
Sbjct:   84 IEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRK--------EFYSRDFSRRFLY--LSNFDLFSSPAANWRDTFSCTMAPDTPKPQDLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLPDQ-IEGLQVR-REGHWFDVPHVSGALIINIGDLLQLITNDKFISLEHRV 299          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.085e-13
Identity = 59/225 (26.22%), Postives = 112/225 (49.78%), Query Frame = 1
Query:   37 LKKLXXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGY-MAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQ---FRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRVQCKE 687
            L ++    E WG F +VNH +S  LM +++++  E     +E  +R  +++A  G     T+ N        +       V++     D     ++ ++++A  +++LA ++   L E++GL    +  VF          +++ Y   P+     G++ HTD+G L +L  D+ V GL V+ + G +V V P+  ++++NLGD   V +NG+  +V HRV  +E
Sbjct:   22 LNQINDACENWGFFELVNHGISHELMDKVEKLTKEHYRKCME--QRFKEMVASKGLDSVETEINDTDWESTFF--LRHLPVSNMSEIGDLDEEYKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVL-KDGKWVDVPPMHHSIVINLGDQLEVITNGKYKSVMHRVIAQE 241          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.335e-13
Identity = 56/222 (25.23%), Postives = 108/222 (48.65%), Query Frame = 1
Query:   37 LKKLXXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQF-----RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 675
            +K +    E WG F +VNH +   LM E++++  E     +E  +R  +++A     A    N +      +       V++     D +   R+ ++++A+ +++LA  +   L E++GL    +   F            +++ Y   P      G++ HTD+G L +L  D+ V GL+++ + G +V V P+  ++++NLGD   V +NG+  +V HRV
Sbjct:   21 MKLINDACENWGFFELVNHSIPVELMDEVERLTKEHYKKCME--QRFKELMASKVEGAVVDANDMDWESTFF--IRHLPVSNLSEIPDLTDEHRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLL-KDGEWVDVPPMNHSIVINLGDQVEVITNGKYKSVMHRV 237          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.335e-13
Identity = 55/225 (24.44%), Postives = 110/225 (48.89%), Query Frame = 1
Query:   37 LKKLXXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASS-----QAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQDW-------PCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 675
            ++K+    E WG F +VNH +S  LM  ++++  E  +  +E  +R  +++A  G  A      +   +   D  S+       V++     D     R+ ++++A+ +++LA  L   L E++GL     +             +++ Y   P      G++ HTD+G + +L  D  V GL+++ + G ++ V P+  ++++N+GD   V +NG+  +V HRV
Sbjct:   21 MEKIKDACENWGFFELVNHGISHELMDTVERLTKEHYNKCME--QRFKEMVATKGLEA------VQSEINDLDWESTFFLRHLPVSNISEIPDLEQDHRKAMKEFAEKLEKLAEQLLDLLCENVGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLL-KDGEWIDVPPMKHSIVINIGDQLEVITNGKYKSVMHRV 236          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13
Identity = 60/229 (26.20%), Postives = 104/229 (45.41%), Query Frame = 1
Query:   37 LKKLXXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLE-------IKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQ-------DWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 675
            + ++    EEWG F++VNH +   L+  +K+V  E   L  E       ++  +T V  G G           + L   D      + D        P   ET+++Y + I++LA  +   + E++G      +         P  F  +++ Y   P      G++ HTD+G + +L  D+ VGGL+++ + G ++ V PL   +++N GD   V SNGR  +  HRV
Sbjct:   20 MARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECYKLREERFEGSKPVQLLDTLVKEGDG-----------QRLDNVDWEDVFVLQDDNEWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQML-KDGRWIDVQPLADAIVINTGDQIEVLSNGRYKSAWHRV 236          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13
Identity = 58/221 (26.24%), Postives = 110/221 (49.77%), Query Frame = 1
Query:   37 LKKLXXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYM-APTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQDW-------PCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 675
            L ++      WG F+VVNH +S  LM +++++  E      E K +  D++   G + A +Q N +      Y     +  ++     D     R+ ++++A  I+ L+  L   L E++GL  +  ++            +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G +V V P+  +++VNLGD   V +NG+  +V HRV
Sbjct:   27 LDQIKDACHNWGFFQVVNHSLSHELMDKVERMTKEHYKKFREQKFK--DMVQTKGLVSAESQVNDIDWESTFY--LRHRPTSNISEVPDLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGHWVDVPPMKHSIVVNLGDQLEVITNGKYKSVMHRV 242          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12
Identity = 62/234 (26.50%), Postives = 114/234 (48.72%), Query Frame = 1
Query:   37 LKKLXXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVAD-----FCSHL---------DASPHQRETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQ---FRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 675
            L+K+    E WG F +VNH +S+ L+  ++++  +     +E  +R  +++A               A GL D+ S     D     F  HL         D     R+T++++A  +++LA  L   L E++GL    +  VF          +++ Y   P+     G++ H+D+G + +L  D+ V GL+++ + G +V V P+  ++++NLGD   V +NG+  +V HRV
Sbjct:   21 LEKINDACENWGFFELVNHGMSTELLDTVEKMTKDHYKKTME--QRFKEMVA---------------AKGLDDVQSEIHDLDWESTFFLRHLPSSNISEIPDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLL-KDGEWVDVPPMHHSIVINLGDQIEVITNGKYKSVMHRV 236          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12
Identity = 67/240 (27.92%), Postives = 100/240 (41.67%), Query Frame = 1
Query:   37 LKKLXXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGS-GYMAP-----TQKNPLYEALGLY-----DMASSQAVADFCSHLDASPHQR---ETIEKYAQAIQELAVDLAHKLAESMGLMDS-------VFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRVQCKESA 693
            ++++    E  G F VVNH + + L+ E  + +     LPL  K+R       S GY +        K P  E L        D    + V ++      + H R   E   +Y   +  L+++L   L ES+G++          FQ      R+N Y      + + G   H D   LTIL  D +VGGLEV    G +  + P PG L+VN+GD     SN R  +  HR     +A
Sbjct:   61 VRQVGEACERHGFFLVVNHGIEAALLEEAHRCMDAFFTLPLGEKQRAQRRAGESCGYASSFTGRFASKLPWKETLSFRYSSAGDEEGEEGVGEYLVRKLGAEHGRRLGEVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQD-HVGGLEVWAE-GRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNSTA 298          
The following BLAST results are available for this feature:
BLAST of DR403951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
ACCH1_ARATH3.694e-1425.781-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
NCS1_COPJA4.825e-1426.24S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
ACCH3_ARATH3.127e-1325.881-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCO3_CUCME4.085e-1326.221-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCO_PERAE5.335e-1325.231-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO_ACTDE5.335e-1324.441-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCO_MUSAC6.967e-1326.201-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
ACCO_DIACA6.967e-1326.24Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO1_MALDO1.552e-1226.501-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
GAOX1_ORYSJ2.027e-1227.92Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246M20 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246M20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403951 ID=DR403951; Name=DR403951; organism=Citrus sinensis; type=EST; length=704bp
GGGGGACGATAGATCTGGCCGTAATTCCCGAAGCAGCTGAAGAAACTGAN
NNNNNNNAGCGAGGAATGGGGATGCTTCAGGGTGGTGAACCACAAGGTCT
CGTCAACGCTGATGGCGGAAATGAAGCAAGTGGTGGGGGAGCTTTTGGAT
CTTCCTCTCGAGATCAAACGACGCAACACCGATGTGATCGCCGGCAGCGG
CTACATGGCTCCCACCCAGAAGAATCCTCTGTATGAAGCTTTGGGTCTCT
ACGACATGGCTTCTTCTCAAGCTGTTGCTGACTTTTGTTCTCACCTGGAT
GCCTCTCCTCATCAGAGAGAGACAATAGAGAAATATGCTCAAGCAATACA
AGAGTTGGCCGTGGATTTGGCGCATAAATTGGCCGAGAGTATGGGGTTGA
TGGACAGTGTGTTCCAGGATTGGCCTTGCCAGTTTAGGATAAACAAGTAC
AACTTCGCTCCAGAAAGCGTAGGCTCCCCTGGAGTGCAATTACACACAGA
TTCAGGGTTCCTTACTATTCTTCAAGATGATGAAAATGTTGGTGGCCTCG
AAGTGATGGACAGAGCTGGTGCATTTGTACCTGTTGATCCCTTGCCCGGC
ACCCTCCTTGTCAATCTTGGAGACATTGCCACGGTATGGAGTAACGGAAG
GTTGCTCAATGTGAAGCATAGAGTGCAGTGCAAGGAATCAGCAATAANAG
TATC
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