DR403951

Overview
NameDR403951
Unique NameDR403951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12
Identity = 53/220 (24.09%), Postives = 113/220 (51.36%), Query Frame = 1
Query:   37 LKKLXXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 675
            L+K+    E WG F +VNH +S+ L+  ++++  +     +E  +R  +++A  G  A   +    +    + +    + ++     D     R+T++++A  +++LA  L   L E++GL       + +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+  ++++NLGD   V +NG+  ++ HRV
Sbjct:   21 LEKINDACENWGFFELVNHGISTELLDTVEKMNKDHYKKTME--QRFKEMVAAKGLEAVQSEIHYLDWESTFFLRHLPS-SNISEIPDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGEWMDVPPVHHSIVINLGDQIEVITNGKYKSIMHRV 236          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12
Identity = 55/212 (25.94%), Postives = 101/212 (47.64%), Query Frame = 1
Query:   61 EEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQF---RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 675
            E WG F +VNH +   LM   +++  E   + +E K  +     G   +    ++  +E+           + D     D S   R  ++ + + ++ LA DL   L E++GL    +  VF          +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V PL  ++++NLGD   V +NGR  ++ HRV
Sbjct:   32 ENWGFFEIVNHGLPHDLMDNAEKMTKEHYKISMEQKFNDMLKSKGLENLEREVEDVDWESTFYLRHLPQSNLYDIP---DMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLL-KDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRV 239          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.458e-12
Identity = 54/212 (25.47%), Postives = 106/212 (50.00%), Query Frame = 1
Query:   61 EEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQ---FRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 675
            E WG F +VNH +   +M  ++++        +E  +R  +++A  G  A   +    +    + +     V++ C   D     RE +  +A+ +++LA +L   L E++GL    +  +F          +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+  +++VNLGD   V +NG+  +V HRV
Sbjct:   29 ENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCME--QRFKELVASKGLEAVQAEVTDLDWESTFFLRHLP-VSNICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLL-KDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRV 236          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.516e-12
Identity = 61/217 (28.11%), Postives = 100/217 (46.08%), Query Frame = 1
Query:   58 SEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKR---RNTDVIAGSGYMAPTQKNPLYEAL---GLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQDW------PCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHR 672
            SEEWG F+VVNH + + L+  ++ V  +  +LP   K    +  D     GY    QK+P  +      L+      +  ++       P  RE  E+YA  +++L+  L   L++ +GL     ++           +IN Y   P    + GV  HTD   +T+L  +E V GL+V  +   +   + +P  ++V++GD     SNGR  NV HR
Sbjct:   64 SEEWGLFQVVNHGIPTELIRRLQDVGRKFFELPSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNYRFWPKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRDALKEGLGGEMAEYMMKINYYPPCPRPDLALGVPAHTDLSGITLLVPNE-VPGLQVF-KDDHWFDAEYIPSAVIVHIGDQILRLSNGRYKNVLHR 278          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12
Identity = 55/221 (24.89%), Postives = 109/221 (49.32%), Query Frame = 1
Query:   37 LKKLXXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMA-PTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQ------DWPC-QFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 675
            ++K+    E WG F +V+H + +  +  ++++  E     LE  +R  +++A  G  A  T+ N +      Y        ++     D     R  ++++A  +++LA  L   L E++GL     +      + P    +++ Y   P      G++ HTD+G L +L  D+ V GL+++ + G ++ V P+  ++++NLGD   V +NG+  +V+HRV
Sbjct:   21 MEKIKDACENWGFFELVSHGIPTEFLDTVERLTKEHYRQCLE--QRFKELVASKGLEAVKTEVNDMDWESTFY--LRHLPKSNISEVPDLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVINLGDQLEVITNGKYRSVEHRV 236          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12
Identity = 63/234 (26.92%), Postives = 104/234 (44.44%), Query Frame = 1
Query:   28 PKQLKKLXXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKR---RNTDVIAGSGYMAPTQ-KNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMD------------SVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEV---MDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHR 672
            P++   L    EEWG F + +H VS +L+  +   +  L  LP+  K    R+ D   G G +  +   + L  + G   M SS          D        +E+Y +A+ +L+  L   L  S+GL              S         ++N Y   P+   + G+  HTDS  LTIL    N+ GLE+    +    ++ V+P+ G+L+V +GD++ + SNG+  +  HR
Sbjct:   55 PEEHGLLRQACEEWGVFHITDHGVSHSLLHNVDCQMKRLFSLPMHRKILAVRSPDESTGYGVVRISMFYDKLMWSEGFSVMGSSLRRHATLLWPDDHAEFCNVMEEYQKAMDDLSHRLISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQG-NIPGLEIESPQEEGSRWIGVEPIEGSLVVIMGDLSHIISNGQFRSTMHR 287          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12
Identity = 55/220 (25.00%), Postives = 107/220 (48.64%), Query Frame = 1
Query:   37 LKKLXXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQF---RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 675
            ++K+    E WG F  VNH +S  L+ +++++  E     +E + + +    G   +     +  +E+           ++D     D     R  ++ +A  I++L+ +L   L E++GL    +  VF          +++ Y   P      G++ HTD+G + +L  D+ V GL+++ + G +V V P+  +++VNLGD   V +NG+  +V+HRV
Sbjct:   21 MEKIKDACENWGFFECVNHGISLELLDKVEKMTKEHYKKCMEERFKESIKNRGLDSLRSEVNDVDWESTFYLKHLPVSNISDVP---DLDDDYRTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRV 236          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11
Identity = 64/217 (29.49%), Postives = 93/217 (42.86%), Query Frame = 1
Query:   61 EEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGS-GYMAP-----TQKNPLYEALGLYDMASSQA-VADFCSHLDASPHQR--ETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHR 672
            E  G F+VVNH + + L+A+  + V     +PL  K+R       S GY +        K P  E L      S  A V D+        H+R  E   +Y   +  L++++   L ES+G+        F+      R+N Y      + + G   H D   LTIL  D NVGGL+V    G +  + P     +VN+GD     SNGR  +  HR
Sbjct:   67 ERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRHPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQD-NVGGLQV-HTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHR 281          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11
Identity = 64/217 (29.49%), Postives = 93/217 (42.86%), Query Frame = 1
Query:   61 EEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGS-GYMAP-----TQKNPLYEALGLYDMASSQA-VADFCSHLDASPHQR--ETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHR 672
            E  G F+VVNH + + L+A+  + V     +PL  K+R       S GY +        K P  E L      S  A V D+        H+R  E   +Y   +  L++++   L ES+G+        F+      R+N Y      + + G   H D   LTIL  D NVGGL+V    G +  + P     +VN+GD     SNGR  +  HR
Sbjct:   67 ERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQD-NVGGLQV-HTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHR 281          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11
Identity = 63/228 (27.63%), Postives = 101/228 (44.30%), Query Frame = 1
Query:   37 LKKLXXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKR---RNTDVIAGSGYMAPTQKNPLYEALG-------LYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQ------DWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHR 672
            ++ +   S EWG F+V NH + S L+ +++ V  E  +LP E K    R  D     GY    QK    E  G       L+      +  ++       P  R   E+YA+ ++E+   L   L+  +G+   V +      D     +IN Y   P    + GV  HTD   LT+L  +E V GL+V  +   ++    +P  L++++GD   + SNG+   V HR
Sbjct:   57 VRSIAEASREWGIFQVTNHGIPSDLICKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQK----EVEGKKSWVDHLFHRVWPPSSINYRFWPKNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGVEGGVLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVF-KDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHR 278          
The following BLAST results are available for this feature:
BLAST of DR403951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
ACCO2_MALDO2.027e-1224.091-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO1_BRAJU2.027e-1225.941-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
ACCO_TOBAC3.458e-1225.471-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
FLS1_ARATH4.516e-1228.11Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
ACCO_PRUMU5.898e-1224.891-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
G3OX3_ARATH7.703e-1226.92Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis th... [more]
ACCO1_ARATH7.703e-1225.001-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
GAO1D_WHEAT1.716e-1129.49Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
GAO1A_WHEAT1.716e-1129.49Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
FLS_CITUN1.716e-1127.63Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246M20 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246M20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403951 ID=DR403951; Name=DR403951; organism=Citrus sinensis; type=EST; length=704bp
GGGGGACGATAGATCTGGCCGTAATTCCCGAAGCAGCTGAAGAAACTGAN
NNNNNNNAGCGAGGAATGGGGATGCTTCAGGGTGGTGAACCACAAGGTCT
CGTCAACGCTGATGGCGGAAATGAAGCAAGTGGTGGGGGAGCTTTTGGAT
CTTCCTCTCGAGATCAAACGACGCAACACCGATGTGATCGCCGGCAGCGG
CTACATGGCTCCCACCCAGAAGAATCCTCTGTATGAAGCTTTGGGTCTCT
ACGACATGGCTTCTTCTCAAGCTGTTGCTGACTTTTGTTCTCACCTGGAT
GCCTCTCCTCATCAGAGAGAGACAATAGAGAAATATGCTCAAGCAATACA
AGAGTTGGCCGTGGATTTGGCGCATAAATTGGCCGAGAGTATGGGGTTGA
TGGACAGTGTGTTCCAGGATTGGCCTTGCCAGTTTAGGATAAACAAGTAC
AACTTCGCTCCAGAAAGCGTAGGCTCCCCTGGAGTGCAATTACACACAGA
TTCAGGGTTCCTTACTATTCTTCAAGATGATGAAAATGTTGGTGGCCTCG
AAGTGATGGACAGAGCTGGTGCATTTGTACCTGTTGATCCCTTGCCCGGC
ACCCTCCTTGTCAATCTTGGAGACATTGCCACGGTATGGAGTAACGGAAG
GTTGCTCAATGTGAAGCATAGAGTGCAGTGCAAGGAATCAGCAATAANAG
TATC
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