DR403951

Overview
NameDR403951
Unique NameDR403951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: ISP7_SCHPO (Sexual differentiation process protein isp7 OS=Schizosaccharomyces pombe GN=isp7 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11
Identity = 47/130 (36.15%), Postives = 67/130 (51.54%), Query Frame = 1
Query:  316 RETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQDW----PCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDR-AGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRVQCKES 690
            R+ + KY   +   A  +   LAES+ L    F ++        R+ +Y   P S    GVQ HTD+  LT++  D NV GLE++D  +  F+ V P PG L+ NLGDI  + +N R  +  HRV C  S
Sbjct:  216 RKALVKYHDQMLAFANHVMSLLAESLELSPDAFDEFCSDPTTSIRLLRY---PSSPNRLGVQEHTDADALTLMSQD-NVKGLEILDPVSNCFLSVSPAPGALIANLGDIMAILTNNRYKSSMHRV-CNNS 340          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11
Identity = 64/217 (29.49%), Postives = 93/217 (42.86%), Query Frame = 1
Query:   61 EEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGS-GYMAP-----TQKNPLYEALGLYDMASSQA-VADFCSHLDASPHQR--ETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHR 672
            E  G F+VVNH + + L+A+  + V     +PL  K+R       S GY +        K P  E L      S  A V D+        H+R  E   +Y   +  L++++   L ES+G+        F+      R+N Y      + + G   H D   LTIL  D NVGGL+V    G +  + P     +VN+GD     SNGR  +  HR
Sbjct:   67 ERHGFFQVVNHGIDAELLADAHRCVDAFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQD-NVGGLQV-HTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHR 281          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11
Identity = 65/221 (29.41%), Postives = 104/221 (47.06%), Query Frame = 1
Query:   58 SEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIA-GSGYM-APTQKNPLYEALG--------LYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL------MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHR 672
            S EWG F+VVNH +    +A++++V  E  +LP + K    +VIA   GY         L + LG        L+ +   ++  ++    +  P  RE  E+YA A++ +   L   L+  +GL        S   D     +IN Y   P    + GV  HTD   +TIL  +E V GL+V  +   +  V  +P  L++++GD   + SNG+  +V HR
Sbjct:   66 SREWGIFQVVNHGIPDDAIAKLQKVGKEFFELPQQEK----EVIAKPEGYQGVEGYGTKLQKELGGKKGWVDHLFHIIWPKSAVNYNFWPNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEKHELKKASGGDDLIYMLKINYYPPCPRPDLALGVVAHTDMSAITILVPNE-VQGLQV-HKDDHWYDVKYIPNALIIHIGDQIEIMSNGKYKSVYHR 280          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11
Identity = 60/245 (24.49%), Postives = 109/245 (44.49%), Query Frame = 1
Query:   28 PKQLKKLXXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVAD------FCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL-----MDSVFQDWPCQ--FRINKYNFAPESVGSP-------GVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV--QCKESAI 696
            P+    L    E++G F+V+NH VS+ L++ ++    +   LP   K +    +AG  +     K      +G  +     A  D      F S L +    R  +E+Y  +++++  D+  K+ + +G+     +  +  D       R+N Y   P S           G   HTD   +++L+ + N  GL++    G+++ V P   +   N+GD   V +NGR  +V+HRV   CK+S +
Sbjct:   26 PESKHALVKACEDFGFFKVINHGVSAELVSVLEHETVDFFSLPKSEKTQ----VAGYPFGYGNSKIGRNGDVGWVEYLLMNANHDSGSGPLFPSLLKSPGTFRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISVLRSN-NTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCKKSRV 265          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11
Identity = 53/212 (25.00%), Postives = 105/212 (49.53%), Query Frame = 1
Query:   61 EEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 675
            E WG F +VNH +   +M  ++++        +E  +R  +++A  G  A   +    +    + +     V++     D     RE +  +A+ +++LA +L   L E++GL       + +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+  +++VNLGD   V +NG+  +V HRV
Sbjct:   29 ENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCME--QRFKELVASKGLEAVQAEVTDLDWESTFFLRHLP-VSNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRV 236          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11
Identity = 52/212 (24.53%), Postives = 104/212 (49.06%), Query Frame = 1
Query:   61 EEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 675
            E WG F  VNH +S  +M  ++++  E     +E  +R  +++A  G      +    +    + +     V+      D     R+ ++++A  ++ELA +L   L E++GL       + +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ +   ++ V P+  ++++NLGD   V +NG+  +V HRV
Sbjct:   29 ENWGFFECVNHGISIEMMDTVEKLTKEHYKKCME--QRFKEMVATKGLECVQSEIDDLDWESTFFLRHLP-VSSISEIPDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVMHRV 236          
BLAST of DR403951 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11
Identity = 50/227 (22.03%), Postives = 106/227 (46.70%), Query Frame = 1
Query:   31 KQLKKLXXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQDW-------PCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRVQCKES 690
            K L+++    + WG F +VNH +    +  ++++  +     +E + + T +  G         +  +E+           ++      D     ++ ++++A+ ++ LA +L   L E++GL     +             +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+   ++VNLGD   V +NGR  +V HRV  + S
Sbjct:   19 KILEQIEDACQNWGFFELVNHGIPHEFLDMVEKMTRDHYKKCMEERFKETVLSKGLEAAQAEVNDMDWESTFFLRHLPESNISQMS---DLDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGNWIDVPPMRHAIVVNLGDQLEVITNGRYKSVMHRVLTQTS 241          
The following BLAST results are available for this feature:
BLAST of DR403951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
ISP7_SCHPO2.241e-1136.15Sexual differentiation process protein isp7 OS=Sch... [more]
GAO1B_WHEAT2.241e-1129.49Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
FLS_PETCR2.927e-1129.41Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
G2OX1_ARATH3.823e-1124.49Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]
ACCO3_PETHY3.823e-1125.001-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO_PEA8.517e-1124.531-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO1_CUCME8.517e-1122.031-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246M20 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246M20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403951 ID=DR403951; Name=DR403951; organism=Citrus sinensis; type=EST; length=704bp
GGGGGACGATAGATCTGGCCGTAATTCCCGAAGCAGCTGAAGAAACTGAN
NNNNNNNAGCGAGGAATGGGGATGCTTCAGGGTGGTGAACCACAAGGTCT
CGTCAACGCTGATGGCGGAAATGAAGCAAGTGGTGGGGGAGCTTTTGGAT
CTTCCTCTCGAGATCAAACGACGCAACACCGATGTGATCGCCGGCAGCGG
CTACATGGCTCCCACCCAGAAGAATCCTCTGTATGAAGCTTTGGGTCTCT
ACGACATGGCTTCTTCTCAAGCTGTTGCTGACTTTTGTTCTCACCTGGAT
GCCTCTCCTCATCAGAGAGAGACAATAGAGAAATATGCTCAAGCAATACA
AGAGTTGGCCGTGGATTTGGCGCATAAATTGGCCGAGAGTATGGGGTTGA
TGGACAGTGTGTTCCAGGATTGGCCTTGCCAGTTTAGGATAAACAAGTAC
AACTTCGCTCCAGAAAGCGTAGGCTCCCCTGGAGTGCAATTACACACAGA
TTCAGGGTTCCTTACTATTCTTCAAGATGATGAAAATGTTGGTGGCCTCG
AAGTGATGGACAGAGCTGGTGCATTTGTACCTGTTGATCCCTTGCCCGGC
ACCCTCCTTGTCAATCTTGGAGACATTGCCACGGTATGGAGTAACGGAAG
GTTGCTCAATGTGAAGCATAGAGTGCAGTGCAAGGAATCAGCAATAANAG
TATC
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