CX069623
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069623 vs. ExPASy Swiss-Prot
Match: NQO4_PARDE (NADH-quinone oxidoreductase subunit 4 OS=Paracoccus denitrificans GN=nqo4 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.202e-13 Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = 2 Query: 422 TRNGQIKNFTSNFGPQHPAAHGVSRSVLEMNGEVVERAEPHIGLLQCGTKPLTPSR 589 T I+NF NFGPQHPAAHG+ R VLE++GE+VERA+PHIGLL GT+ L SR Sbjct: 19 TGEQSIRNFNINFGPQHPAAHGLLRMVLELDGEIVERADPHIGLLHRGTEKLMESR 74
BLAST of CX069623 vs. ExPASy Swiss-Prot
Match: NUOD_SILST (NADH-quinone oxidoreductase subunit D OS=Silicibacter sp. (strain TM1040) GN=nuoD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.570e-13 Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = 2 Query: 422 TRNGQIKNFTSNFGPQHPAAHGVSRSVLEMNGEVVERAEPHIGLLQCGTKPLTPSR 589 T +I+NF NFGPQHPAAHGV R VLE++GE+VER +PHIGLL GT+ L SR Sbjct: 11 TGEQKIRNFNINFGPQHPAAHGVLRLVLELDGEIVERCDPHIGLLHRGTEKLMESR 66
BLAST of CX069623 vs. ExPASy Swiss-Prot
Match: NUOD_ROSDO (NADH-quinone oxidoreductase subunit D OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=nuoD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.570e-13 Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = 2 Query: 422 TRNGQIKNFTSNFGPQHPAAHGVSRSVLEMNGEVVERAEPHIGLLQCGTKPLTPSR 589 T +I+NF NFGPQHPAAHGV R VLE++GE+VER +PHIGLL GT+ L SR Sbjct: 13 TGEQKIRNFNINFGPQHPAAHGVLRLVLELDGEIVERCDPHIGLLHRGTEKLMESR 68
BLAST of CX069623 vs. ExPASy Swiss-Prot
Match: NUOD_RHOPB (NADH-quinone oxidoreductase subunit D OS=Rhodopseudomonas palustris (strain BisB18) GN=nuoD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.570e-13 Identity = 34/53 (64.15%), Postives = 43/53 (81.13%), Query Frame = 2 Query: 431 GQIKNFTSNFGPQHPAAHGVSRSVLEMNGEVVERAEPHIGLLQCGTKPLTPSR 589 G ++NFT NFGPQHPAAHGV R VLE++GE+VER +PHIGLL GT+ L ++ Sbjct: 4 GALRNFTINFGPQHPAAHGVLRLVLELDGEIVERVDPHIGLLHRGTEKLIEAK 56
BLAST of CX069623 vs. ExPASy Swiss-Prot
Match: NUOD_RHOP5 (NADH-quinone oxidoreductase subunit D OS=Rhodopseudomonas palustris (strain BisA53) GN=nuoD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.570e-13 Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = 2 Query: 431 GQIKNFTSNFGPQHPAAHGVSRSVLEMNGEVVERAEPHIGLLQCGTKPL 577 G ++NFT NFGPQHPAAHGV R VLE++GEVVER +PHIGLL GT+ L Sbjct: 4 GALRNFTINFGPQHPAAHGVLRLVLELDGEVVERVDPHIGLLHRGTEKL 52
BLAST of CX069623 vs. ExPASy Swiss-Prot
Match: NUOD_DINSH (NADH-quinone oxidoreductase subunit D OS=Dinoroseobacter shibae (strain DFL 12) GN=nuoD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.570e-13 Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = 2 Query: 422 TRNGQIKNFTSNFGPQHPAAHGVSRSVLEMNGEVVERAEPHIGLLQCGTKPLTPSR 589 T +I+NF NFGPQHPAAHGV R VLE++GE+VER +PHIGLL GT+ L SR Sbjct: 12 TGEQKIRNFNINFGPQHPAAHGVLRLVLELDGEIVERCDPHIGLLHRGTEKLMESR 67
BLAST of CX069623 vs. ExPASy Swiss-Prot
Match: NUOD_ANAMM (NADH-quinone oxidoreductase subunit D OS=Anaplasma marginale (strain St. Maries) GN=nuoD PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.570e-13 Identity = 37/56 (66.07%), Postives = 45/56 (80.36%), Query Frame = 2 Query: 413 PMT-TRNGQIKNFTSNFGPQHPAAHGVSRSVLEMNGEVVERAEPHIGLLQCGTKPL 577 PM+ TR+ +IK T NFGPQHPAAHGV R +LEM+GEV+ER +PHIGLL GT+ L Sbjct: 3 PMSDTRSSRIKPMTLNFGPQHPAAHGVMRLILEMSGEVIERIDPHIGLLHRGTEKL 58
BLAST of CX069623 vs. ExPASy Swiss-Prot
Match: NUOD_NITOC (NADH-quinone oxidoreductase subunit D OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=nuoD PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13 Identity = 33/52 (63.46%), Postives = 43/52 (82.69%), Query Frame = 2 Query: 434 QIKNFTSNFGPQHPAAHGVSRSVLEMNGEVVERAEPHIGLLQCGTKPLTPSR 589 +I+NFT NFGPQHPAAHGV R VLEM+GE+++RA+PH+GLL T+ L S+ Sbjct: 3 EIRNFTLNFGPQHPAAHGVLRLVLEMDGEIIQRADPHVGLLHRATEKLAESK 54
BLAST of CX069623 vs. ExPASy Swiss-Prot
Match: NUOD_BRASO (NADH-quinone oxidoreductase subunit D OS=Bradyrhizobium sp. (strain ORS278) GN=nuoD PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13 Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 2 Query: 416 MTTRNGQIKNFTSNFGPQHPAAHGVSRSVLEMNGEVVERAEPHIGLLQCGTKPLTPSR 589 M ++ ++NFT NFGPQHPAAHGV R VLE++GEVVER +PHIGLL GT+ L ++ Sbjct: 1 MNEQSPALRNFTINFGPQHPAAHGVLRLVLELDGEVVERVDPHIGLLHRGTEKLIETK 58
BLAST of CX069623 vs. ExPASy Swiss-Prot
Match: NUOD_BRASB (NADH-quinone oxidoreductase subunit D OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=nuoD PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13 Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 2 Query: 416 MTTRNGQIKNFTSNFGPQHPAAHGVSRSVLEMNGEVVERAEPHIGLLQCGTKPLTPSR 589 M ++ ++NFT NFGPQHPAAHGV R VLE++GEVVER +PHIGLL GT+ L ++ Sbjct: 1 MNEQSPALRNFTINFGPQHPAAHGVLRLVLELDGEVVERVDPHIGLLHRGTEKLIETK 58 The following BLAST results are available for this feature:
BLAST of CX069623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069623 ID=CX069623; Name=CX069623; organism=Citrus sinensis; type=EST; length=888bpback to top |