CX069560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 144.821 bits (364), Expect = 5.538e-34 Identity = 69/136 (50.74%), Postives = 99/136 (72.79%), Query Frame = 3 Query: 423 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+ E I LP+ H E FE LGI PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F++A+E +P I Sbjct: 131 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCI 266
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PS6AA_ARATH (26S protease regulatory subunit 6A homolog A OS=Arabidopsis thaliana GN=RPT5A PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.538e-34 Identity = 80/236 (33.90%), Postives = 130/236 (55.08%), Query Frame = 3 Query: 186 LQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNK---------------------VLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 L ++R + R + + +++ +E+++L ++ VG +V+++ N V++K + P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+ E I LP+ H E FE LG+ PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E AP I Sbjct: 32 LDNEIRILKEDAQRTNLECDSYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCI 267
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.234e-33 Identity = 79/236 (33.47%), Postives = 129/236 (54.66%), Query Frame = 3 Query: 186 LQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNK---------------------VLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 L ++R L R + + +++ +E+++L ++ VG +V+++ N V++K + P V + DSY++ LPS+ D V M+V++ P Y IGGL++QI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P I Sbjct: 31 LDNEIRIIKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEEEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYHDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 266
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 4.689e-33 Identity = 79/236 (33.47%), Postives = 128/236 (54.24%), Query Frame = 3 Query: 186 LQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNK---------------------VLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 L + R L R + +++ +E+++L ++ VG +V+++ N V++K + P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+ E I LP+ H + F+ LGI PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P I Sbjct: 37 LDNETRVLKDELQRTNLEVESYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCI 272
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.388e-31 Identity = 62/103 (60.19%), Postives = 83/103 (80.58%), Query Frame = 3 Query: 522 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 VPD TY+ IGGL ++++ ++E+IELP+KHPELF+ LGI PKGVLLYGPPGTGKTL+A+AVA+ D FI +SG E++ KY GE + +RE+F A+E+APSI Sbjct: 176 VPDVTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSI 278 HSP 2 Score: 111.694 bits (278), Expect = 5.196e-24 Identity = 51/115 (44.35%), Postives = 80/115 (69.57%), Query Frame = 3 Query: 486 VDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 ++P + +VP+ ++ IGGL+ +E+ E +E P+K+PE+F + I P+G+LL+GPPGTGKTLLA+AVA+ ++ FI V G EL+ K++GE + VRE+F AR+ AP + Sbjct: 437 IEPSAMREVLVEVPNVKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCV 551
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.844e-30 Identity = 62/111 (55.86%), Postives = 85/111 (76.58%), Query Frame = 3 Query: 498 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 V+ +K KVPD TY+ IGGL +++K+++E+IELP++HPELFE LGI PKGVLL GPPGTGKTLLA+AVA+ F ++G E++ KY+GE +R++F A E+APSI Sbjct: 165 VSEIKETKVPDVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSI 275 HSP 2 Score: 114.005 bits (284), Expect = 1.047e-24 Identity = 53/115 (46.09%), Postives = 80/115 (69.57%), Query Frame = 3 Query: 486 VDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 V+P + +VP+ ++ IGGL++ +E++E +E P+K E+FE +G+ PKGVLL+GPPGTGKTLLA+AVA+ + FI V G E+ K++GE + +RE+F AR+ AP I Sbjct: 434 VEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCI 548
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS6A_SCHPO (26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe GN=tbp1 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.408e-29 Identity = 60/136 (44.12%), Postives = 94/136 (69.12%), Query Frame = 3 Query: 423 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 P + + DSY++ LPS+ D V M+V++ P Y IGGL +QI+E+ E I LP++ + F LG+ PKG L++GPPGTGKTLLARA A ++ TF++++ +LVQ +IG+G+++VR+ F +A+E +P+I Sbjct: 146 PGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAI 281
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: VAT_THEAC (VCP-like ATPase OS=Thermoplasma acidophilum GN=vat PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.107e-29 Identity = 59/106 (55.66%), Postives = 82/106 (77.36%), Query Frame = 3 Query: 513 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 +E+V +Y+ IGGL +Q+ +I+E+IELP+KHPELFE LGI PKGV+LYGPPGTGKTL+ARAVA+ + F+ ++G E++ KY G+ + +RE+F A E APSI Sbjct: 181 LEEVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSI 286 HSP 2 Score: 110.538 bits (275), Expect = 1.158e-23 Identity = 51/104 (49.04%), Postives = 75/104 (72.12%), Query Frame = 3 Query: 519 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 +VP+ +D IGGL+ +EIKE +ELP+ P++F+ LGI KG LLYGPPG GKTLLA+AVA ++ FI + G E++ K++GE + +RE+F A++ AP+I Sbjct: 460 EVPNVHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAI 563
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: CDCH_HALSA (Protein cdcH OS=Halobacterium salinarium GN=cdcH PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.254e-27 Identity = 52/99 (52.53%), Postives = 79/99 (79.80%), Query Frame = 3 Query: 534 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 TY+ IGGL+ +I+ ++E++ELP+KHP++F+ LGI P+GVLL+GPPGTGKTLLA+AVA+ T +F ++G E++ KY GE + +RE+F A++ +PSI Sbjct: 187 TYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSI 285 HSP 2 Score: 111.309 bits (277), Expect = 6.786e-24 Identity = 51/117 (43.59%), Postives = 78/117 (66.67%), Query Frame = 3 Query: 480 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 S+V+P + ++P T+D +GGL + +KE +E P+ PE F +G+ P GVLLYGPPGTGKTL+A+AVA+ T+ FI V G +L+ K++GE + +R+ F AR+ AP++ Sbjct: 442 SEVEPSAMREVLVELPKITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTV 558
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 2.109e-25 Identity = 53/102 (51.96%), Postives = 77/102 (75.49%), Query Frame = 3 Query: 525 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 P +++ IG L++ ++I+E++E P++HPELF+ LGI PKG+LLYGPPGTGKTLLARA+A+ FI V+G E++ K+ GE + +RE+F A E+APSI Sbjct: 207 PKVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSI 308 HSP 2 Score: 110.153 bits (274), Expect = 1.512e-23 Identity = 48/104 (46.15%), Postives = 74/104 (71.15%), Query Frame = 3 Query: 519 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 +VP ++ IGGLD ++++E +E P++ PELF G+ PKG+LL+GPPGTGKT+LA+AVA + FI V G E++ K++GE + +RE+F AR+ AP++ Sbjct: 480 EVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTV 583 The following BLAST results are available for this feature:
BLAST of CX069560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 366
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069560 ID=CX069560; Name=CX069560; organism=Citrus sinensis; type=EST; length=832bpback to top |