CX069560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.316e-48 Identity = 95/215 (44.19%), Postives = 143/215 (66.51%), Query Frame = 3 Query: 186 LQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 L ++R+ + +E +R L+ V+ L+ E++ + P + V +V+ ++V VK +V+ P RVAL ++ + +LPS+ DP+V M+VE+ PD +Y+ IGGL++Q++E+KE +ELP+K PELFE +GI PKGVLLYGPPGTGKTLLA+AVAH T+ TFI++ SE V+KYIGEG+R+VR +F +A+E +PSI Sbjct: 33 LMWKIRKLEKDKLLIENERTRLDREVKSLRGEIERFRTPPLVIATVTEVLDDHRVAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSI 247
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.025e-48 Identity = 98/222 (44.14%), Postives = 147/222 (66.22%), Query Frame = 3 Query: 165 YLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 Y +I L+ ++RQ + LEA + L + L+ E+ L++P ++ G V++V+ ++ +V+ + ++VV P +RVAL + + +LP++ DP V +V + P TY IGGL++Q+ E++E +ELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+AVA+H + TFIRV GSELV+K+IGEG+R+V ELF MA+E AP+I Sbjct: 13 YEDYITFLKRRIRQLELQVRTLEADKERLERELSRLRTEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEVIEKPRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTI 234
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.025e-48 Identity = 98/222 (44.14%), Postives = 147/222 (66.22%), Query Frame = 3 Query: 165 YLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 Y ++ L+ ++RQ + LEA + L + L+ E+ L++P ++ G V++V+ + +V+ + ++VV P RVAL + + +LPS+ DP V +V + P TY+ IGGL++Q++E++E IELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+AVA+H + TFIRV GSELV+K+IGEG+R+V ELF +A+E AP+I Sbjct: 13 YDDYVTFLKRRIRQLELQVRTLEADKERLERELSRLRMEMSRLRQPPAFAGNVIEVLDDERAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTI 234
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.739e-48 Identity = 102/238 (42.86%), Postives = 147/238 (61.76%), Query Frame = 3 Query: 138 KQGEGLRQYYLQHIH-------ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 ++GE L +Y L+ + EL+ Q+RQ + LE Q+ VR K E++ ++ P +G V ++ +N+V+V+ +++V P R L S + ILP+ D + M+V + P Y+ IGGL++QI EI+E +ELP+K PE+F +GI PKGVLL+GPPGTGKTLLARAVAH T+ F+RV GSELVQKYIGEG+R+VRELF +A++ +PSI Sbjct: 12 QKGEDLYRYLLERVTNLEDRNTELREQLRQIEADKRYLETQKVRYEREVRKFKGEIEQMKSPPLVIGTVTDLIDENRVIVRSSAGPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEILPTNYDAQIYGMEVIEAPSERYEEIGGLEKQINEIREAVELPLKKPEVFRKMGIEPPKGVLLHGPPGTGKTLLARAVAHQTEAHFLRVVGSELVQKYIGEGARLVRELFELAKKKSPSI 249
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 8.801e-48 Identity = 106/236 (44.92%), Postives = 146/236 (61.86%), Query Frame = 3 Query: 144 GEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSR-------VRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 G+ QY L+ + +L+ + RLE ++ + S VR L+ E++ L+ P VG V ++ +V+VK K+VV P RVAL + + +LP+ DP+V +VE+ P+ +Y+ IGGLD QI+EI+E +ELP+ PELF +GI PKGVLLYGPPGTGKTLLA+AVA+ T TFIRV GSE VQKYIGEG+R+VRE+F +A+E APSI Sbjct: 2 GDSEIQYLLEKLKKLEEDYYKLRELYRRLEDEKKFIESERIRYEREVRRLRSEVERLRSPPLLVGVVSDILEDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSI 237
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.149e-47 Identity = 99/232 (42.67%), Postives = 152/232 (65.52%), Query Frame = 3 Query: 135 SKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 S++ + Y + I +L+LQVR LEA + L + L+ E+ L++P ++ G +++++ +++ +V+ + ++VV P RVAL + + +LPS+ DP V +V + P +Y+ IGGLD+Q++E++E IELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+A+AH + TFIRV GSELV+K+IGEG+R+V ELF +A+E AP+I Sbjct: 11 SEEYDDYIMYLKKRIRQLELQVRT-------LEADKERLERELSRLRMEMSRLRQPPAFAGTLIELLDEDRAIVQNYNGPRFVVRIAPWIERENLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGGLDKQLQELREAIELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPAI 235
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 5.705e-47 Identity = 100/216 (46.30%), Postives = 134/216 (62.04%), Query Frame = 3 Query: 183 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 EL+ Q+RQ + +E Q+ VR LK E + L+ P +G VV V+ N+V+V+ +++V P R L S + +LPS D V M++ P Y IGGL +QI E++E +ELP+K PELF +GI PKGVLLYGPPGTGKTLLA+AVAH T+ F+RV GSELVQKYIGEG+R+VRELF +A++ AP+I Sbjct: 59 ELREQIRQAEADKRYIETQKIRYEREVRKLKSESEQLRSPPLIIGTVVDVVDANRVIVRSSAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGGLKEQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNAHFMRVVGSELVQKYIGEGARLVRELFDLAKKKAPTI 274
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.451e-47 Identity = 101/231 (43.72%), Postives = 141/231 (61.04%), Query Frame = 3 Query: 159 QYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSR-------VRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 +Y L + +L+ + + ++E ++ + ++ +R L EL L+ P VG ++ VM K+++K K+VV P +VAL S + +LP+ DP V M+V P+ Y IGGL+ QI E+KE +ELP+ PELF+ +GI PKGVLLYGPPGTGKTLLA+AVA+ T TFIR+ GSELVQKYIGEG+RMVRELF +A+E +PSI Sbjct: 25 KYLLDRVKQLEERNVRLKEEYRKIELEKKSVENKKVQYEREIRKLTSELDRLKTPPLIVGTILDVMANGKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKDPSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSI 255
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.405e-45 Identity = 97/216 (44.91%), Postives = 132/216 (61.11%), Query Frame = 3 Query: 183 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 EL+ Q+RQ + +E Q+ VR LK E++ L+ P VG + ++ +V+V+ +++V R L S + +LPS D V M++ P TY+ IGGL++QI EI+E +ELP+ P+LFE +GI PKGVLLYGPPGTGKTLLA+AVAH T F+ GSELVQKYIGEG+R+VRELF +A+E APSI Sbjct: 34 ELKEQIRQLESDKRYIETQKIRYEREVRKLKSEIEHLKTPPLIVGTITDIIDSGRVVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYGPPGTGKTLLAKAVAHETHAIFLHTVGSELVQKYIGEGARLVRELFDLAKEKAPSI 249
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.405e-45 Identity = 100/225 (44.44%), Postives = 134/225 (59.56%), Query Frame = 3 Query: 156 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K + + K +VK +YVV P TRVAL + + LP +VDPLV M E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA DC F++V S +V KYIGE +R++RE+F AR+H P I Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCI 229 The following BLAST results are available for this feature:
BLAST of CX069560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 366
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069560 ID=CX069560; Name=CX069560; organism=Citrus sinensis; type=EST; length=832bpback to top |