CX069560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.425e-42 Identity = 91/216 (42.13%), Postives = 128/216 (59.26%), Query Frame = 3 Query: 183 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 E+QL VR + L+ + L + K E++ + P V+ V+ +VLV+ VV P VAL + +LP K DP+V M++ + P+ TY IGGL++QIKE++EV+ELP+K PE+F +G+ PKGVLLYGPPGTGKT+LA+AVA ++ FI V SE QK++GEG+R+VRELF MA+ APSI Sbjct: 16 EVQL-VRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSI 230
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.425e-42 Identity = 89/186 (47.85%), Postives = 119/186 (63.98%), Query Frame = 3 Query: 267 MLKEELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 812 ++ ++ + +E V K++ N K ++ V K+VV RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR Sbjct: 73 LVSDKQMMQEEQPLQVARCTKIINPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMAR 258
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS7_PONAB (26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2 SV=3) HSP 1 Score: 170.629 bits (431), Expect = 9.425e-42 Identity = 97/225 (43.11%), Postives = 134/225 (59.56%), Query Frame = 3 Query: 165 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 812 Y + I +++ ++Q +N L E+ + L + Q LQ E V K++ + K ++ V K+VV RV + + Y +H+ LP K+DP V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR Sbjct: 41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIITADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR 265
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.425e-42 Identity = 89/186 (47.85%), Postives = 119/186 (63.98%), Query Frame = 3 Query: 267 MLKEELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 812 ++ ++ + +E V K++ N K ++ V K+VV RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR Sbjct: 73 LVSDKQMMQEEQPLQVARCTKIISPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMAR 258
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.425e-42 Identity = 89/186 (47.85%), Postives = 119/186 (63.98%), Query Frame = 3 Query: 267 MLKEELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 812 ++ ++ + +E V K++ N K ++ V K+VV RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR Sbjct: 73 LVSDKQMMQEEQPLQVARCTKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMAR 258
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.425e-42 Identity = 94/227 (41.41%), Postives = 136/227 (59.91%), Query Frame = 3 Query: 153 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVH-PEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 LR +Q IH+ L + N RL+ Q + R + + + ++ VG + +++ + +V PE Y V P V L + + + +L DP++N+MK++K P +Y IGGL+ QI+EIKE +ELP+ HPEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G R+VR+LF A EH+PSI Sbjct: 67 LRLLKMQRIHDHLLMEEEYVQNQERLKPQ----DERTQEERNRVDEIRGTPMSVGTLEEIIDDDHAIVSTAGPE--YYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSI 287
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS10_CAEEL (Probable 26S protease regulatory subunit S10B OS=Caenorhabditis elegans GN=rpt-4 PE=1 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 9.425e-42 Identity = 90/212 (42.45%), Postives = 128/212 (60.38%), Query Frame = 3 Query: 195 QVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 + R L L + +E+ + + +++ LQ G VGEV+K + + K +VK +YVV TRV+L + + LP +VDPLV M E + +Y +GGL +QI+E++EV+ELP+ +PELF+ +GI PKG LL+GPPGTGKTLLARAVA DC F++V S +V KYIGE +RM+RE+F AR+H P I Sbjct: 35 ECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCI 246
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 1.231e-41 Identity = 96/193 (49.74%), Postives = 122/193 (63.21%), Query Frame = 3 Query: 246 ELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 812 +L S +M++EE LL V +++ N K +V + GKYVV RV + Y + + LP K+DP V +M VE+ PD+TY IGG +QI++I+EV+ELP+ HPE F LGI PKGVL YGPPG+GKTL+ARAVA+ T FIRV GSELVQKYIGEG+RMVRELF MAR Sbjct: 109 DLVSDKQMMQEEQPLL------VATCTQIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMAR 295
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.100e-41 Identity = 93/226 (41.15%), Postives = 141/226 (62.39%), Query Frame = 3 Query: 153 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 L+Q L+ I + L ++ N + + + +E NS+ + ++ ++ L+ VG + +++ N +V ++ V V L N + + ++ +VDP+VN+MKVEK P +Y IGGL+ Q++E+KE IELP+ HPEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A E APSI Sbjct: 56 LKQLKLERIKDYLLMEQEFLQNYDLNQPKVDE-NSKEQADEKIIEELRGDPLTVGNLEEIIDDNHAIVSSTVGPEHYVRIMSFVDKSKLYLGATVLLNNKTLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSI 280
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 2.100e-41 Identity = 93/228 (40.79%), Postives = 133/228 (58.33%), Query Frame = 3 Query: 147 EGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 E + Y LQH R+ L L +L + +++++ LQ G +GEV+K + + +VK +YVV RV+L + + ILP +VDPLV M +E D ++ +GGL++QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA F++V S +V KYIGE +R++RE+F A+EH P + Sbjct: 9 EKYKSYLLQH--------REWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVLKQLDSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCV 228 The following BLAST results are available for this feature:
BLAST of CX069560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 366
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069560 ID=CX069560; Name=CX069560; organism=Citrus sinensis; type=EST; length=832bpback to top |