CX069560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.742e-41 Identity = 90/216 (41.67%), Postives = 129/216 (59.72%), Query Frame = 3 Query: 183 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 E+QL VR + L+ + L + K E++ + P V+ V+ +VLV+ VV P VAL + +LP K DP+V M++ + P+ TY IGGL++QI+E++EV+ELP+K+PE+F +G+ PKGVLLYGPPGTGKT+LA+AVA ++ FI V SE QK++GEG+R+VRELF MA+ APSI Sbjct: 16 EVQL-VRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNIASHIDQKLIKPGISVALNQRGSTILEVLPQKEDPIVKTMEIIERPNVTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSI 230
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.742e-41 Identity = 93/233 (39.91%), Postives = 137/233 (58.80%), Query Frame = 3 Query: 132 ASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 A ++ + Y + +H +L+ R +T N L A + E N +++L+ LQ G +GEV++ + +++VK +YVV TRV L + + LP +VDP+V M E + +Y +GGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AREH P I Sbjct: 8 ARRRTAAVTDYRKKLLHHKELESRVRTAREN-LRAAKKEFNKT----EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCI 235
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3) HSP 1 Score: 168.703 bits (426), Expect = 3.582e-41 Identity = 96/225 (42.67%), Postives = 133/225 (59.11%), Query Frame = 3 Query: 165 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 812 Y + I +++ ++Q +N L E+ + L + Q LQ E V K++ + K ++ V K+VV RV + + Y +H+ LP K+DP V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGTGKTL ARAVA+ TD FI V GSELVQKY+GEG+RMVRELF MAR Sbjct: 41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMAR 265
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.678e-41 Identity = 89/223 (39.91%), Postives = 133/223 (59.64%), Query Frame = 3 Query: 183 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 +L +++ L +E Q + ++ L+ EE++ +Q +G+ ++++ +N +V Y V PS V L S L +LP + D ++L+ + PD TY+ IGG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGKT+LA+AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+I Sbjct: 34 DLYARLKSLQRQLEFIEIQEEYVKDELKNLRREHLRAQEEVKRIQSVPLVIGQFMEMIDQNNAIVGSTTGSNYYVRILSTINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 256
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.109e-41 Identity = 99/249 (39.76%), Postives = 142/249 (57.03%), Query Frame = 3 Query: 84 KQPESAAPEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 K PE+AA K LR L+ I + L + N RL+ Q + + ++ L+ VG + +++ +N +V +Y V P + + N + IL +VDP+V++MKVEK P +Y IGGL+ QI+EIKE +ELP+ HPEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A + +PSI Sbjct: 44 KGPEAAARLPTVTPSTKCK----LRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEED----RSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSI 284
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.109e-41 Identity = 99/249 (39.76%), Postives = 142/249 (57.03%), Query Frame = 3 Query: 84 KQPESAAPEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 K PE+AA K LR L+ I + L + N RL+ Q + + ++ L+ VG + +++ +N +V +Y V P + + N + IL +VDP+V++MKVEK P +Y IGGL+ QI+EIKE +ELP+ HPEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A + +PSI Sbjct: 44 KGPEAAARLPTVTPSTKCK----LRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEED----RSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSI 284
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 7.979e-41 Identity = 93/225 (41.33%), Postives = 134/225 (59.56%), Query Frame = 3 Query: 156 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 R+ LQH EL+ +VR NL + + N+ +++L+ LQ G +GEV++ + +++VK +YVV TRV L + + LP +VDP+V M E + +Y +GGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AREH P I Sbjct: 19 RKKLLQH-KELESRVRTARENLRGAKKEFNKT-------EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCI 235
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 7.979e-41 Identity = 84/158 (53.16%), Postives = 106/158 (67.09%), Query Frame = 3 Query: 339 KNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 812 KN ++ + K+VV RV + Y + L LP K+DP V +M+VE+ PD TY +GG +QI+ ++EV+ELP+ PE F LGI PKG++LYGPPGTGKTL ARAVA+ TD TFIRV GSELVQKY+GEG+RMVRELF MAR Sbjct: 112 KNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMAR 269
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.322e-40 Identity = 93/225 (41.33%), Postives = 135/225 (60.00%), Query Frame = 3 Query: 165 YLQHIHELQLQVRQKTHNLNRLEAQRNELN-----SRVRMLKEELQLLQEPGSYVGEVVKVM--GKN--KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 812 Y + I L+ +++ T +N L + S+ ++ ++ +EP V K++ GK K ++ V K+VV RV + + Y + + LP K+D V +M+VE+ PD TY +GG +QI++++EV+E+P+ HPE F +LGI PKGVL+YGPPGTGKTL ARAVA+ TD F+RV GSELVQKY+GEG+RMVR+LF MAR Sbjct: 36 YSKSIRILEEDIKKMTSKVNELCGIKESDTGIGPPSQWDLVVDKTSAHEEPPLQVARCTKIIDVGKPNAKYIITVKQIAKFVVALGDKLSPTDVEEGIRVGVDRNKYQIQIPLPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMAR 260
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.032e-40 Identity = 88/223 (39.46%), Postives = 130/223 (58.30%), Query Frame = 3 Query: 183 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 +L + ++ L LE Q + R LK EE++ +Q +G+ ++ + +N +V Y V PS VAL S L +LP + D +++++ ++ PD Y IGG+D Q +EI+E +ELP+ H EL+ +GI P+GVL+YGPPG GKT+LA AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E++P+I Sbjct: 36 DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAI 258 The following BLAST results are available for this feature:
BLAST of CX069560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 366
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069560 ID=CX069560; Name=CX069560; organism=Citrus sinensis; type=EST; length=832bpback to top |