CX069560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.352e-39 Identity = 86/227 (37.89%), Postives = 132/227 (58.15%), Query Frame = 3 Query: 171 QHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 + + +L + ++ L LE Q + + LK EE++ +Q +G+ ++ + +N +V Y V P+ VAL S L +LP + D + ++ ++ PD Y IGG+D Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+LA+AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+I Sbjct: 35 EDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 261
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 4.378e-39 Identity = 92/226 (40.71%), Postives = 129/226 (57.08%), Query Frame = 3 Query: 153 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 L Y +H + VR + L + +L + K EL+ L P V+ ++ KV+V+ +V P + VAL + +LP + D V +V + P+ Y IGGL++QI EI+EVIELP+K+PELF+ +GI PKGVLLYGPPGTGKTLLA+AVA ++ TFI+V SE QK++GEG+R+VRE+F +AR APSI Sbjct: 5 LDSYRAKHYNSDDPIVRLLEEKIESLTKELEKLRQDLNWYKGELEKLLAPPYIEAIVLDILPDGKVIVRSSSGPNLIVNVSSNIDIKKLKPGSLVALTQRGSTIVEVLPEREDAYVKSFEVIEKPNVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKTLLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSI 230
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.378e-39 Identity = 87/218 (39.91%), Postives = 131/218 (60.09%), Query Frame = 3 Query: 177 IHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 + +L+ + T + ++ ++ L ++ +EE++ +Q +G+ ++ + +N +V YVV PS VAL S L ILP D +++M + PD TY +GGLD Q +EI+E +ELP+ +L+E +GI P+GVLLYGPPGTGKT+L +AVA+ T FIRV+GSE V KY+GEG RMVR++F +ARE+APSI Sbjct: 51 LKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQSVPLVIGQFLEPIDQNTGIVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSI 268
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.378e-39 Identity = 86/227 (37.89%), Postives = 131/227 (57.71%), Query Frame = 3 Query: 171 QHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 + + +L + ++ L LE Q + + LK EE++ +Q +G+ ++ + +N +V Y V P+ VAL S L +LP D + ++ ++ PD Y IGG+D Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+LA+AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+I Sbjct: 35 EDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVASTTGSNYYVRMVSTIDRELLKPNASVALHKHSNALVDVLPPAADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 261
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS6B_SCHPO (26S protease regulatory subunit 6B homolog OS=Schizosaccharomyces pombe GN=rpt3 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 9.754e-39 Identity = 90/225 (40.00%), Postives = 132/225 (58.67%), Query Frame = 3 Query: 183 ELQLQVRQKT--HNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 E+ L R K L L+ Q + + LK EE++ +Q +G+ ++ + +N +V YVV PS VAL+ S L ILP + D +++++ ++ PD +Y +GGLD Q +E++E +ELP+ +L+ +GI P+GVLLYGPPGTGKT+L +AVA+ T FIRV GSE VQKY+GEG RMVR++F MARE+AP+I Sbjct: 6 EIDLYNRWKALERQLEMLDLQEGFIKEDCKSLKRELIRAQEEVKRIQSVPLVIGQFLEAIDQNTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAI 230
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.664e-38 Identity = 86/223 (38.57%), Postives = 133/223 (59.64%), Query Frame = 3 Query: 168 LQHIHELQLQVRQKTHNLNR--LEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 L H+ ++ ++ +T NL + L AQ EE++ +Q +G+ ++ + +N +V Y V P VAL S L +LP + D + +++ ++ PD +Y IGGLD Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+LA+AVA +T +FIRV GSE VQKY+GEG RMVR++F +A+E++PSI Sbjct: 47 LAHLQVMEDYIKLETRNLEKELLHAQ------------EEVKRIQSVPLVIGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSI 257
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3) HSP 1 Score: 159.458 bits (402), Expect = 2.173e-38 Identity = 79/186 (42.47%), Postives = 120/186 (64.52%), Query Frame = 3 Query: 273 KEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 K++L+ ++ +G + +++ + +V Y V P V L + + + +L DP+V++MK++K P +Y IGGL+ QI+EIKE +ELP+ HPEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+R+ GSEL+QKY+G+G R+ R++F +A E+APSI Sbjct: 93 KKQLEEIRGNPLSIGTLEEIIDDDHAIVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSI 278
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PSMR2_HALSA (Proteasome-activating nucleotidase 2 OS=Halobacterium salinarium GN=pan2 PE=3 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 2.838e-38 Identity = 85/228 (37.28%), Postives = 139/228 (60.96%), Query Frame = 3 Query: 156 RQYYLQHIHELQLQVRQKTHNLNRL---EAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 +Q L+ + E + ++ +RL A+ N+ ++ L E + L++ ++ V ++ + V +K H + + P +RVA+ N V+ L + D +M+V+ PD Y+ IGGLD Q++E++E +ELP+K P LFE++GI P GVLL+GPPGTGKTL+A+AVA TD +FI+++GSELV K+IGEG+++VR+LF +AR+H P++ Sbjct: 20 QQDKLEALEEQLSTLEEENEERDRLLDANAENNKYQQKLERLSHENKKLKQSPLFIATVQELTDEGAV-IKQHGNNQEALTEVTDELRATLEPGSRVAVNNSLSVVRQ-LDDEADVRARVMEVDDSPDVGYEDIGGLDDQLREVRETVELPMKDPGLFETVGINPPSGVLLHGPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAV 245
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.841e-38 Identity = 73/120 (60.83%), Postives = 99/120 (82.50%), Query Frame = 3 Query: 471 ILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 +L ++DP+VN+MK+EK P TY IGGL++QI+EIKE +ELP+ +PEL++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV G+EL+Q+Y+GEG ++VRELF +A HAPSI Sbjct: 146 VLEGEMDPMVNVMKLEKAPSETYADIGGLEEQIQEIKESVELPLTNPELYQEMGIKPPKGVILYGLPGTGKTLLAKAVANQTSATFLRVVGTELIQEYLGEGPKLVRELFRVADMHAPSI 265
BLAST of CX069560 vs. ExPASy Swiss-Prot
Match: PRS10_DICDI (26S protease regulatory subunit S10B OS=Dictyostelium discoideum GN=psmC6 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.257e-38 Identity = 85/229 (37.12%), Postives = 132/229 (57.64%), Query Frame = 3 Query: 147 EGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXX-PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 830 E ++ LQ+ + ++ + LN+ +L + ++ ++ +Q G +GEV++ + + + +VK +YVV P RV L + + ILP +VDP++ M E +Y IGGL QI+E++EV+ELP+ PELF +GI PKGVLLYGPPGTGKTLLARA+A + + F++V S +V KYIGE +R++RE+F AR+H P + Sbjct: 5 ETKKEQALQNYRDRLIEHKNAELRLNKAHELIKKLKKDFQKTEDHIKTIQYIGEIIGEVLRSLDEERFIVKACNGPRYVVRCANYQDKAHLLVPGARVTLDLTTLTILKILPREVDPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCV 233 The following BLAST results are available for this feature:
BLAST of CX069560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 366
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069560 ID=CX069560; Name=CX069560; organism=Citrus sinensis; type=EST; length=832bpback to top |