CX069559
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.498e-59 Identity = 114/218 (52.29%), Postives = 166/218 (76.15%), Query Frame = -3 Query: 225 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAK-VMKKETEKN 875 P GVLL+GPPGTGKT+LA+AVA+ TD +FI+++GSELV+K+IGEGSR+VR+LF +A + P+IIF+DEID++ + R +S + +GD+EVQRTM++LL+++DGF+ I+++ ATNR D+LD A+LRPGR DR IE PNPN ++R IL+IH+ MN+ +D +A SGA+L ++ TEAGMFA+R+ R V ++DF+ A K V + +TE + Sbjct: 186 PSGVLLHGPPGTGKTMLAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKRTDSKT-SGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSAILRPGRFDRLIEVPNPNPDARERILEIHAGEMNVADSVDFSDLAADTAEFSGAQLASLATEAGMFAIRDDRDEVHRQDFDDAYEKLVAEGDTESS 402
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 2.555e-59 Identity = 118/224 (52.68%), Postives = 157/224 (70.09%), Query Frame = -3 Query: 207 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK-KETEKNMSLRKL 875 PKGVLLYGPPGTGKTLLARAVA F++V S +V KYIGE +R++RE+F A+EH P +IFMDEID+IG R G+ + D E+QRT++ELLNQ+DGF+ + K++MATNR D LD ALLRPGR+DRKIE P PNE R++ILKIH +++ ID + + + +G +GA+L+ V TEAG A++E R +V Q D A KV K+ E + +KL Sbjct: 166 PKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKVADLKKLEGTIDYQKL 388
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 6.293e-58 Identity = 112/215 (52.09%), Postives = 155/215 (72.09%), Query Frame = -3 Query: 231 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 875 PKGVLLYGPPGTGKTLLA+AVA ++ TFI+V SE QK++GEG+R+VRE+F +AR APSI+F+DEID+IG+ R++ G+ +G+ E+QRT+++LL ++DGF+ + +K++ ATNR+DILD ALLRPGR DR IE P PN E R +I +I+ ++M I +A G SGAE+K VCTEAG A+R R +V D A+ K+ K + Sbjct: 168 PKGVLLYGPPGTGKTLLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGT-SGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTDLITAIEKIKAKNNK 381
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4) HSP 1 Score: 223.016 bits (567), Expect = 1.831e-57 Identity = 113/224 (50.45%), Postives = 153/224 (68.30%), Query Frame = -3 Query: 207 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK-KETEKNMSLRKL 875 PKGVLLYGPPGTGKTLLA+AVA FI S +V KYIGE +R++RE+F A+EH P IIFMDE+D+IG R G+ + D E+QRT++ELL Q+DGF+ + K++MATNR D LD ALLRPGR+DRK+E P PNE RL+I KIH+ ++ D + + +G +GA+++ TEAG FA+R+ R H+ +D AV KV + K+ E + +KL Sbjct: 215 PKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGT-SADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRKVAEVKKLEGTIEYQKL 437
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 4.079e-57 Identity = 112/223 (50.22%), Postives = 162/223 (72.65%), Query Frame = -3 Query: 210 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNMSLRK 875 PKGVLLYGPPGTGKT+LA+AVA ++ FI V SE QK++GEG+R+VRELF MA+ APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF+ + +K++ ATNRIDILD ALLRPGR DR IE P P+ + R +I I+ ++M + I+L+ +++ G SGA++K VC EA A+R+ R VT D A+ K+ +K+ ++M R+ Sbjct: 168 PKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDLVEAINKINVKRNKMESMKERR 389
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 4.079e-57 Identity = 112/223 (50.22%), Postives = 161/223 (72.20%), Query Frame = -3 Query: 210 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNMSLRK 875 PKGVLLYGPPGTGKT+LA+AVA ++ FI V SE QK++GEG+R+VRELF MA+ APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF + +K++ ATNRIDILD ALLRPGR DR IE P P+ R +I I+ ++M + I+L+ +++ G SGA++K VC EA A+R+ R VT +D A+ K+ +K+ ++M R+ Sbjct: 168 PKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVNAITKINVKRNNMESMKERR 389
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 5.327e-57 Identity = 112/223 (50.22%), Postives = 161/223 (72.20%), Query Frame = -3 Query: 210 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNMSLRK 875 PKGVLLYGPPGTGKT+LA+AVA ++ FI V SE QK++GEG+R+VRELF MA+ APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF + +K++ ATNRIDILD ALLRPGR DR IE P P+ R +I I+ ++M + I+L+ +++ G SGA++K VC EA A+R+ R VT +D A+ K+ +K+ ++M R+ Sbjct: 168 PKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKRNNMESMKERR 389
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 5.327e-57 Identity = 112/223 (50.22%), Postives = 161/223 (72.20%), Query Frame = -3 Query: 210 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNMSLRK 875 PKGVLLYGPPGTGKT+LA+AVA ++ FI V SE QK++GEG+R+VRELF MA+ APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF + +K++ ATNRIDILD ALLRPGR DR IE P P+ R +I I+ ++M + I+L+ +++ G SGA++K VC EA A+R+ R VT +D A+ K+ +K+ ++M R+ Sbjct: 168 PKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKRNNMESMKERR 389
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 5.327e-57 Identity = 112/223 (50.22%), Postives = 161/223 (72.20%), Query Frame = -3 Query: 210 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNMSLRK 875 PKGVLLYGPPGTGKT+LA+AVA ++ FI V SE QK++GEG+R+VRELF MA+ APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF + +K++ ATNRIDILD ALLRPGR DR IE P P+ R +I I+ ++M + I+L+ +++ G SGA++K VC EA A+R+ R VT +D A+ K+ +K+ ++M R+ Sbjct: 168 PKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKRNNMESMKERR 389
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 5.327e-57 Identity = 112/223 (50.22%), Postives = 161/223 (72.20%), Query Frame = -3 Query: 210 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNMSLRK 875 PKGVLLYGPPGTGKT+LA+AVA ++ FI V SE QK++GEG+R+VRELF MA+ APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF + +K++ ATNRIDILD ALLRPGR DR IE P P+ R +I I+ ++M + I+L+ +++ G SGA++K VC EA A+R+ R VT +D A+ K+ +K+ ++M R+ Sbjct: 168 PKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKRNNMESMKERR 389 The following BLAST results are available for this feature:
BLAST of CX069559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069559 ID=CX069559; Name=CX069559; organism=Citrus sinensis; type=EST; length=907bpback to top |