CX069559
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: SEC18_CANAL (Vesicular-fusion protein SEC18 OS=Candida albicans GN=SEC18 PE=3 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 4.399e-27 Identity = 73/233 (31.33%), Postives = 126/233 (54.08%), Query Frame = -3 Query: 258 KGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSELVQKYIGEGSRMVRELF--------VMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMN----LMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRER---------------RIHVTQEDFEMAV 872 KG+LLYGPPGTGKTL+AR ++ + + V+G E++ KY+G +R LF + + +I DE+DS+ R SG +G + +LL+++DG + N I V+ TNR+D++D ALLRPGR + +IE P+E+ R DI IH++++ L ++ +++ +GAE++ +C A +A+ ++ +T++DF +A+ Sbjct: 311 KGLLLYGPPGTGKTLIARKLSKMLNGKEPKIVNGPEMLSKYVGASEENIRNLFKDAEAEYKLKGEDSDLHVIIFDELDSVFKQR-GSGKSDGTGVGDNVVNQLLSKMDGVDQLNNILVIGMTNRLDLIDTALLRPGRFEIQIEISLPDEKGRKDIFLIHTKKLTENGILSSDVNFDELSTLTKNFTGAEIEGLCNSAKSYAISRHTKKGALAQIDPESIAKMKITRDDFLLAL 542
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: MPA_MYCTU (Proteasome-associated ATPase OS=Mycobacterium tuberculosis GN=mpa PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.503e-27 Identity = 79/202 (39.11%), Postives = 116/202 (57.43%), Query Frame = -3 Query: 333 PKGVLLYGPPGTGKTLLARAVA---------------HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSARMESGSGNG-DSEVQRTML-ELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAV 875 PKGVLLYGPPG GKTL+A+AVA H F+ + G EL+ K++GE R +R +F ARE A P I+F DE+DSI R G G S+V+ T++ +LL+++DG E + V+ A+NR D++D A+LRPGR+D KI+ P+ E+ D I+S+ + + +AE +G A +KA+ Sbjct: 286 PKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTR-----GTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQD---IYSKYLTEFLPVHADDLAE-FDGDRSACIKAM 478
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: MPA_MYCBO (Proteasome-associated ATPase OS=Mycobacterium bovis GN=mpa PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.503e-27 Identity = 79/202 (39.11%), Postives = 116/202 (57.43%), Query Frame = -3 Query: 333 PKGVLLYGPPGTGKTLLARAVA---------------HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSARMESGSGNG-DSEVQRTML-ELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAV 875 PKGVLLYGPPG GKTL+A+AVA H F+ + G EL+ K++GE R +R +F ARE A P I+F DE+DSI R G G S+V+ T++ +LL+++DG E + V+ A+NR D++D A+LRPGR+D KI+ P+ E+ D I+S+ + + +AE +G A +KA+ Sbjct: 286 PKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTR-----GTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQD---IYSKYLTEFLPVHADDLAE-FDGDRSACIKAM 478
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: VPS4_YEAST (Vacuolar protein sorting-associated protein 4 OS=Saccharomyces cerevisiae GN=VPS4 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.799e-27 Identity = 77/193 (39.90%), Postives = 116/193 (60.10%), Query Frame = -3 Query: 300 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTM-LELLNQLDGF-EASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIH-SRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 869 G+LLYGPPGTGK+ LA+AVA + TF VS S+LV K++GE ++V++LF MARE+ PSIIF+DE+D++ R G G+SE R + ELL Q++G S + VL ATN LD A+ R R +R+I P P+ +R + +I+ ++ D + + G SG+++ V +A M +R+ Sbjct: 168 GILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTR-----GEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRR--RFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRK 353
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: VPS4A_RAT (Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus GN=Vps4a PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26 Identity = 72/194 (37.11%), Postives = 116/194 (59.79%), Query Frame = -3 Query: 300 KGVLLYGPPGTGKTLLARAVAHHTD-CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK-IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIH-SRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 872 +G+LL+GPPGTGK+ LA+AVA + TF VS S+L+ K++GE ++V+ LF +AR+H PSIIF+DE+DS+ +R E N +R E L Q+ G +N VL ATN +LD A+ R R +++I P P E +R + ++H + + ++ ++A K G SGA++ + ++ M +R+ Sbjct: 161 RGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNE----NESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: VPS4A_MOUSE (Vacuolar protein sorting-associated protein 4A OS=Mus musculus GN=Vps4a PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26 Identity = 72/194 (37.11%), Postives = 116/194 (59.79%), Query Frame = -3 Query: 300 KGVLLYGPPGTGKTLLARAVAHHTD-CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK-IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIH-SRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 872 +G+LL+GPPGTGK+ LA+AVA + TF VS S+L+ K++GE ++V+ LF +AR+H PSIIF+DE+DS+ +R E N +R E L Q+ G +N VL ATN +LD A+ R R +++I P P E +R + ++H + + ++ ++A K G SGA++ + ++ M +R+ Sbjct: 161 RGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNE----NESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: VPS4A_HUMAN (Vacuolar protein sorting-associated protein 4A OS=Homo sapiens GN=VPS4A PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26 Identity = 72/194 (37.11%), Postives = 116/194 (59.79%), Query Frame = -3 Query: 300 KGVLLYGPPGTGKTLLARAVAHHTD-CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK-IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIH-SRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 872 +G+LL+GPPGTGK+ LA+AVA + TF VS S+L+ K++GE ++V+ LF +AR+H PSIIF+DE+DS+ +R E N +R E L Q+ G +N VL ATN +LD A+ R R +++I P P E +R + ++H + + ++ ++A K G SGA++ + ++ M +R+ Sbjct: 161 RGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNE----NESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: MPA_RHOER (Proteasome-associated ATPase OS=Rhodococcus erythropolis GN=mpa PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26 Identity = 73/167 (43.71%), Postives = 102/167 (61.08%), Query Frame = -3 Query: 435 PKGVLLYGPPGTGKTLLARAVAHH---------------TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSARMESGSGNGDSEVQRTML-ELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDI 875 PKGVLLYGPPG GKTL+A+AVA+ F+ + G EL+ K++GE R +R +F ARE A P I+F DE+DSI R GSG S+V+ T++ +LL+++DG E + V+ A+NR D++D A+LRPGR+D KI+ P+ ES DI Sbjct: 268 PKGVLLYGPPGCGKTLIAKAVANSLAKKIAEARGQDSKDAKSYFLNIKGPELLNKFVGETERHIRMIFQRAREKASEGTPVIVFFDEMDSIFRTR---GSGVS-SDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAESAQDI 430
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: YJNA_SCHPO (Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe GN=SPCC24B10.10c PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.851e-26 Identity = 71/193 (36.79%), Postives = 107/193 (55.44%), Query Frame = -3 Query: 300 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG-FEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 875 PKG+LLYGPPG GKT+LA+A+A + TFI VS L K+ GE +++V LF +AR+ P+IIF+DEID+ R + + + E ++ DG +++ VL ATNR +D+A+ R R+ + P PN E R IL+++ +++ L D + G SG+ +K VC A RE Sbjct: 125 PKGLLLYGPPGCGKTMLAKALAKQSQATFINVSVGLLTDKWFGESNKLVDALFTLARKLEPTIIFIDEIDTFLRQRQRT----DHEAMAQIKAEFMSMWDGLLSGQSRVLVLGATNRPADIDEAIRR--RMPKVFSIPLPNAEQRRKILELYLKKVPLEANFDWNGVVNATAGLSGSYIKEVCRSALSVPRRE 311
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: MSP1_YEAST (Protein MSP1 OS=Saccharomyces cerevisiae GN=MSP1 PE=1 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 2.851e-26 Identity = 72/194 (37.11%), Postives = 110/194 (56.70%), Query Frame = -3 Query: 300 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTM-LELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRG-IDLKKIAEKMNGASGAELKAVCTEAGMFALRE 875 P GVLLYGPPG GKT+LA+A+A + FI + S ++ K+ GE +++V +F +A + P IIF+DEIDS R + D EV T+ E + DG + ++ ++ ATNRI+ +D A LR R+ ++ P + R IL + + L DL+ IA+ G SG++LK +C EA + A +E Sbjct: 126 PSGVLLYGPPGCGKTMLAKALAKESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDSFLRERSST-----DHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLR--RLPKRFLVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAKE 312 The following BLAST results are available for this feature:
BLAST of CX069559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069559 ID=CX069559; Name=CX069559; organism=Citrus sinensis; type=EST; length=907bpback to top |