CX069559
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3) HSP 1 Score: 258.84 bits (660), Expect = 3.011e-68 Identity = 125/218 (57.34%), Postives = 172/218 (78.90%), Query Frame = -3 Query: 222 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNM 875 PKGV+LYG PGTGKTLLA+AVA+ T TF+R+ GSEL+QKY+G+G R+ R++F +A E+APSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF+ +KV+MATN+I+ LD AL+RPGRIDRKI F NP+ ++ IL IH+ +MNL ++L+ + + SGA+++A+CTEAG+ ALRERR+ VT EDF+ A +VMK + E+N+ Sbjct: 216 PKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNKVEENL 432
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 3.933e-68 Identity = 126/214 (58.88%), Postives = 171/214 (79.91%), Query Frame = -3 Query: 234 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKET 875 PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A E APSI+F+DEID++G+ R +S SG G+ E+QRTMLELLNQLDGF+A +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+ +++ I +IH+ +MNL ++L++ + SGA++KA+CTE+G+ ALRERR+ VT DF+ A KV+ ++T Sbjct: 218 PKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSG-GEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFKKAKEKVLYRKT 430
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 6.708e-68 Identity = 133/210 (63.33%), Postives = 163/210 (77.62%), Query Frame = -3 Query: 246 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 875 PKG+LLYGPPGTGKTL ARAVA+ TD TFIRV GSELVQKY+GEG+RMVRELF MAR IIF DEID++G AR + G+G GD+EVQRTMLEL+ QLDGF+ IKV+ ATNR + LD ALLRPGRIDRK+EF P+ E R +I +IHS+ M++ RGI + I+ ++GAEL++VCTEAGMFA+R RR T++DF AV KV+ Sbjct: 243 PKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAG-GDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKVI 451
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS7_CAEEL (26S protease regulatory subunit 7 OS=Caenorhabditis elegans GN=rpt-1 PE=1 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 1.144e-67 Identity = 132/211 (62.56%), Postives = 162/211 (76.78%), Query Frame = -3 Query: 243 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 875 PKGVLLYGPPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID++G AR + G G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRK+EF P+ R ILKIH+++M++ R I +A ++GAE+++VCTEAGMFA+R RR T++DF A+ KV+K Sbjct: 211 PKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVK 420
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.494e-67 Identity = 135/220 (61.36%), Postives = 170/220 (77.27%), Query Frame = -3 Query: 216 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSL 875 PKGVLLYGPPGTGKTLLA+AVA+ T TFIR+ GSELVQKYIGEG+RMVRELF +A+E +PSIIF+DEIDSIG+ R++S + +GD EVQRT+++LL ++DGF+ +++L ATNR DILD ALLRPGR DR I+ P P E+R ILKIH+R+MNL +DL+KIA + +SGA+L A+ EAGMFA+R R V DF AVAKVM E+N S+ Sbjct: 193 PKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEIDSIGAKRLDSIT-SGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNNRDVVDSSDFNAAVAKVM---GERNRSM 408
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3) HSP 1 Score: 256.529 bits (654), Expect = 1.494e-67 Identity = 134/211 (63.51%), Postives = 162/211 (76.78%), Query Frame = -3 Query: 243 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 875 PKGVLL+GPPGTGKTL ARAVA+ TD FI V GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRKIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R RR T++DF AV KV+K Sbjct: 209 PKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 4.348e-67 Identity = 125/209 (59.81%), Postives = 167/209 (79.90%), Query Frame = -3 Query: 249 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 875 PKGVLLYGPPGTGKTLLA+AVAH T+ F+RV GSELVQKYIGEG+R+VRELF +A++ AP+IIF+DEID++G++R E+ + +GD EVQRT+++LL +DGFE +K++ ATNRIDILD+ALLRPGR DR IE P P+EE RL ILK+H+R + + ++L +IA G +GA+L+A+C EAGM+A+R R +T+EDF A+ KV Sbjct: 212 PKGVLLYGPPGTGKTLLAKAVAHETNAHFMRVVGSELVQKYIGEGARLVRELFDLAKKKAPTIIFIDEIDAVGASRTEANT-SGDREVQRTLMQLLAGMDGFETRGDVKIIGATNRIDILDKALLRPGRFDRIIEIPLPDEEGRLSILKVHTRTLTMEETVNLPEIAGLTEGKNGADLRAICMEAGMYAIRNERPAITREDFLSAIEKV 419
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 5.679e-67 Identity = 128/216 (59.26%), Postives = 168/216 (77.78%), Query Frame = -3 Query: 228 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEK 875 PKGVLLYGPPGTGKTLLA+AVAH T+ TFI++ SE V+KYIGEG+R+VR +F +A+E +PSIIF+DEID++ + R++S S +GD EVQRT+++LL +LDGFE+ + ++ ATNR DILD ALLRPGR DR IE P PNE+ R +ILKIH+ M L +D++ +A +GASGA+LKA+CTEAGMFA+R+ R VT DF AV K+M E E+ Sbjct: 185 PKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKS-STSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVDKIMGVEKEE 399
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 5.679e-67 Identity = 124/223 (55.61%), Postives = 177/223 (79.37%), Query Frame = -3 Query: 207 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKL 875 PKGVLLYGPPGTGKTLLA+AVA+ T+ +F+RV GSELV+K+IGEG+++VR++F +A+E +P IIF+DEID++ S R ES +G GD EVQRT+++LL ++DGF++ +K++ ATNR DILD A+LRPGR DR IE P+E+ RLDILKIH+ +MNL +G+DL+++A+ GA+LKAVCTEAGMFA+RE R + +DF+ A++K+ K+ + + + +L Sbjct: 182 PKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTG-GDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNL-KGVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKKEKCSYDMPQL 402
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2) HSP 1 Score: 254.603 bits (649), Expect = 5.679e-67 Identity = 133/211 (63.03%), Postives = 162/211 (76.78%), Query Frame = -3 Query: 243 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 875 PKG++LYGPPGTGKTL ARAVA+ TD TFIRV GSELVQKY+GEG+RMVRELF MAR IIF DEID+IG AR + G+G GD+EVQRTMLEL+ QLDGF+ IKVL ATNR + LD+AL+RPGRIDRK+EF P+ E R IL+IH++ M + + I + IA +GAEL++VCTEAGMFA+R RR T++DF AV KV+K Sbjct: 213 PKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAG-GDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVK 422 The following BLAST results are available for this feature:
BLAST of CX069559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069559 ID=CX069559; Name=CX069559; organism=Citrus sinensis; type=EST; length=907bpback to top |