CX069559
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 246.899 bits (629), Expect = 1.184e-64 Identity = 121/213 (56.81%), Postives = 165/213 (77.46%), Query Frame = -3 Query: 237 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 875 PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F++A+E +P IIF+DEID+IG+ R +S +GD EVQRTMLELLNQLDGF + ++IKV+ ATNR DILD AL+R GR+DRKIEFP+P EE+R IL+IHSR+MN+ ++ +++A + +GA+LKAVC EAGM ALR V EDF + +V K+ Sbjct: 204 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 415
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2) HSP 1 Score: 246.899 bits (629), Expect = 1.184e-64 Identity = 131/211 (62.09%), Postives = 160/211 (75.83%), Query Frame = -3 Query: 243 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 875 PKGVL YGPPG+GKTL+ARAVA+ T FIRV GSELVQKYIGEG+RMVRELF MAR I+F DEID+IG AR + G G+ D+EVQRTMLE+L QLDGF+A IKVLMATNR DILD ALLRPGR+DRK+EF P+ E R I KIH+R M+ R I + +A ++GA++++VC EAGM+A+ RR VT++DF AV KV+K Sbjct: 239 PKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGS-DNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVK 448
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS6A_RAT (26S protease regulatory subunit 6A OS=Rattus norvegicus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.546e-64 Identity = 120/213 (56.34%), Postives = 164/213 (77.00%), Query Frame = -3 Query: 237 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 875 PKGVL+YGPPGTGKTLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+ R +S GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R I++IHSR+MN+ ++ +++A + +GA+ KAVC EAGM ALR +T ED+ + +V K+ Sbjct: 220 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKK 431
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS6A_HUMAN (26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1 SV=3) HSP 1 Score: 246.514 bits (628), Expect = 1.546e-64 Identity = 120/213 (56.34%), Postives = 164/213 (77.00%), Query Frame = -3 Query: 237 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 875 PKGVL+YGPPGTGKTLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+ R +S GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R I++IHSR+MN+ ++ +++A + +GA+ KAVC EAGM ALR +T ED+ + +V K+ Sbjct: 220 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKK 431
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2) HSP 1 Score: 246.128 bits (627), Expect = 2.020e-64 Identity = 129/219 (58.90%), Postives = 164/219 (74.89%), Query Frame = -3 Query: 222 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNM 875 PKGVLLYG PGTGKTLLA+AVAH T+ TFIRV GSELVQKYIG+GS++VRE+F MAR+ APSIIF+DE+DSI + R+ +G D EVQRT+++LL ++DGF+ I+++ ATNR D+LD A+LRPGR DR + P P E+R ILKIH +M L ID KK+A+ G SGA+LKA+ TEAGMFA+R+ + V EDF AV KV M +T+K M Sbjct: 193 PKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTG-ADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFLEAVEKVSMAADTQKMM 410
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 3.445e-64 Identity = 128/219 (58.45%), Postives = 163/219 (74.43%), Query Frame = -3 Query: 222 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNM 875 PKGVLLYG PGTGKTLLA+AVAH T+ TFIRV GSELVQKYIG+GS++VRE+F MAR+ APSIIF+DE+DSI + R+ +G D EVQRT+++LL ++DGF+ I+++ ATNR D+LD A+LRPGR DR + P P E+R ILKIH +M L ID KK+A+ G SGA+LKA+ TEAGMFA+R + V E+F AV KV M +T+K M Sbjct: 193 PKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTG-ADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFLEAVEKVSMAADTQKMM 410
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS6A_ENCCU (26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi GN=RPT5 PE=1 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 3.445e-64 Identity = 118/216 (54.63%), Postives = 164/216 (75.93%), Query Frame = -3 Query: 228 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEK 875 PKGVL+YGPPGTGKTL+ARA A T+ TF++++G +LVQ YIG+G+R+VR+ F +A+E P+IIF+DEID+IG+ R +S GD EVQRTMLELLNQLDGF +S ++K++ ATNR+DILD ALLR GR+DRKIEFP PN R IL+IH+R+M++ ++ ++A G +GA+ KAVC EAGM ALR+ + ++Q DF + +V+ ++ K Sbjct: 182 PKGVLMYGPPGTGKTLMARACASKTNATFLKLAGPQLVQMYIGDGARLVRDAFALAKERKPTIIFIDEIDAIGAKRSDSDQ-TGDREVQRTMLELLNQLDGFSSSEEVKIIAATNRVDILDPALLRSGRLDRKIEFPLPNTLGRKRILQIHARKMSVRDDVNFDELARSTEGFNGAQCKAVCVEAGMAALRKEKTEISQNDFMDGIQEVLSRKKSK 396
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS6A_MOUSE (26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 5.877e-64 Identity = 120/213 (56.34%), Postives = 163/213 (76.53%), Query Frame = -3 Query: 237 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 875 PKGVL+YGPPGTGKTLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+ R +S GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R I++IHSR+MN+ ++ +++A + +GA+ KAVC EAGM ALR +T ED + +V K+ Sbjct: 223 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKAVCVEAGMIALRRGATELTHEDHMEGILEVQAKK 434
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 5.877e-64 Identity = 126/209 (60.29%), Postives = 158/209 (75.60%), Query Frame = -3 Query: 249 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 875 PKGV+LYG PGTGKTLLA+AVA+ T TF+RV G+EL+Q+Y+GEG ++VRELF +A HAPSIIF+DEID+IG R + SG G EVQRTMLELLNQLDGF+ N IKV+MATN+I+ LD AL+RPGRIDRKIEF P+ ++ I IH+ RM L ++++ + SGA++KA+CTEAGM ALRERR VT +DF A KV Sbjct: 203 PKGVILYGLPGTGKTLLAKAVANQTSATFLRVVGTELIQEYLGEGPKLVRELFRVADMHAPSIIFIDEIDAIGGKRYNTSSG-GRREVQRTMLELLNQLDGFDTRNDIKVIMATNKIEALDPALIRPGRIDRKIEFGMPDAATKKKIFDIHTSRMTLDESVNIELLITSKEDLSGADIKAICTEAGMIALRERRKTVTMKDFISAREKV 410
BLAST of CX069559 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 5.972e-64 Identity = 122/209 (58.37%), Postives = 155/209 (74.16%), Query Frame = -3 Query: 249 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 875 PKG LLYGPPGTGKTLLARAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI PNE++RLDILKIH+ + ID + I + +G +GA+L+ VCTEAGMFA+R V QEDF AV KV Sbjct: 167 PKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV 374 HSP 2 Score: 23.0978 bits (48), Expect = 5.972e-64 Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = -2 Query: 862 ELFESLGIAQPXGCI 906 ELF+ +GI P GC+ Sbjct: 157 ELFQRVGIIPPKGCL 171 The following BLAST results are available for this feature:
BLAST of CX069559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069559 ID=CX069559; Name=CX069559; organism=Citrus sinensis; type=EST; length=907bpback to top |