DR403912

Overview
NameDR403912
Unique NameDR403912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length617
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 1.613e-87
Identity = 147/191 (76.96%), Postives = 166/191 (86.91%), Query Frame = 2
Query:    5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGY-NGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574
            G S VFI +T ME GG+P + NP++L+KEAIHVISCGYE+KTEWGKEIGWIYGSVTEDILTGFKMH RGW SIYCMP RPAFKGSAPINLSDRL+QVLRWALG +EI LSRHCP+WYGY  GRLK L+RL+YINTIVYP TS+PLIAYC LPA CLLT KFIIP +SN A++WF+ LFISI  T +LE+RW
Sbjct:  631 GLSSVFIESTLMENGGVPESANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRW 821          

HSP 2 Score: 27.335 bits (59), Expect = 1.613e-87
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  580 GLVFEDWWRNEQ 615
            G+  EDWWRNEQ
Sbjct:  823 GIGIEDWWRNEQ 834          
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2)

HSP 1 Score: 317.005 bits (811), Expect = 1.613e-87
Identity = 147/191 (76.96%), Postives = 166/191 (86.91%), Query Frame = 2
Query:    5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGY-NGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574
            G S VFI +T ME GG+P + NP++L+KEAIHVISCGYE+KTEWGKEIGWIYGSVTEDILTGFKMH RGW SIYCMP RPAFKGSAPINLSDRL+QVLRWALG +EI LSRHCP+WYGY  GRLK L+RL+YINTIVYP TS+PLIAYC LPA CLLT KFIIP +SN A++WF+ LFISI  T +LE+RW
Sbjct:  631 GLSSVFIESTLMENGGVPESANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRW 821          

HSP 2 Score: 27.335 bits (59), Expect = 1.613e-87
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  580 GLVFEDWWRNEQ 615
            G+  EDWWRNEQ
Sbjct:  823 GIGIEDWWRNEQ 834          
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 3.579e-87
Identity = 142/190 (74.74%), Postives = 164/190 (86.32%), Query Frame = 2
Query:    5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574
            GQS VF+A+T +E GG   + +PASLLKEAIHVISCGYEDKT+WGKEIGWIYGS+TEDILTGFKMH  GW SIYC+P RPAFKGSAP+NLSDRL+QVLRWALG +EI  S+HCP+WYGY G LK LER +YIN+IVYP TS+PL+AYCTLPA CLLT KFI PE++N AS+WF+ LFI IF TGILE+RW
Sbjct:  735 GQSSVFVASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSITEDILTGFKMHCHGWRSIYCIPKRPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSKHCPLWYGYGGGLKFLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFVTGILEMRW 924          

HSP 2 Score: 26.9498 bits (58), Expect = 3.579e-87
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  580 GLVFEDWWRNEQ 615
            G+  +DWWRNEQ
Sbjct:  926 GVAIDDWWRNEQ 937          
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 1.763e-86
Identity = 143/190 (75.26%), Postives = 163/190 (85.79%), Query Frame = 2
Query:    5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574
            GQS VF+A+T +E GG   + +PASLLKEAIHVISCGYEDKT+WGKEIGWIYGSVTEDILTGFKMH  GW SIYC+P  PAFKGSAP+NLSDRL+QVLRWALG +EI  S HCP+WYGY G LK LER +YIN+IVYP TS+PL+AYCTLPA CLLT KFI PE++N AS+WF+ LFI IFATGILE+RW
Sbjct:  736 GQSSVFVASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKLPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPFTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFATGILEMRW 925          

HSP 2 Score: 25.7942 bits (55), Expect = 1.763e-86
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  580 GLVFEDWWRNEQ 615
            G+  +DWWRNEQ
Sbjct:  927 GVGIDDWWRNEQ 938          
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 2.300e-86
Identity = 144/190 (75.79%), Postives = 163/190 (85.79%), Query Frame = 2
Query:    5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574
            GQS VF+A+T +E GG   + +PASLLKEAIHVISCGYEDKT+WGKEIGWIYGSVTEDILTGFKMH  GW SIYC+P R AFKGSAP+NLSDRL+QVLRWALG IEI  S HCP+WYGY G LK LER +YIN+IVYP TS+PL+AYCTLPA CLLT KFI PE++N AS+WF+ LFI IFATGILE+RW
Sbjct:  735 GQSSVFVASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLRWALGSIEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRW 924          

HSP 2 Score: 25.7942 bits (55), Expect = 2.300e-86
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  580 GLVFEDWWRNEQ 615
            G+  +DWWRNEQ
Sbjct:  926 GVGIDDWWRNEQ 937          
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 2.300e-86
Identity = 144/190 (75.79%), Postives = 163/190 (85.79%), Query Frame = 2
Query:    5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574
            GQS VF+A+T +E GG   + +PASLLKEAIHVISCGYEDKT+WGKEIGWIYGSVTEDILTGFKMH  GW SIYC+P R AFKGSAP+NLSDRL+QVLRWALG IEI  S HCP+WYGY G LK LER +YIN+IVYP TS+PL+AYCTLPA CLLT KFI PE++N AS+WF+ LFI IFATGILE+RW
Sbjct:  735 GQSSVFVASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLRWALGSIEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRW 924          

HSP 2 Score: 25.7942 bits (55), Expect = 2.300e-86
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  580 GLVFEDWWRNEQ 615
            G+  +DWWRNEQ
Sbjct:  926 GVGIDDWWRNEQ 937          
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 2.301e-86
Identity = 143/191 (74.87%), Postives = 165/191 (86.39%), Query Frame = 2
Query:    5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGY-NGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574
            GQS +F+ +T ME+GG+PP+++PA LLKEAIHVISCGYEDKTEWG E+GWIYGS+TEDILTGFKMH RGW SIYCMP RPAFKGSAPINLSDRLNQVLRWALG +EI  SRH P+WYGY  G+LK LER AY NT +YP TS+PL+AYC LPA CLLT+KFI+P IS FAS++FI LF+SI  TGILE+RW
Sbjct:  669 GQSSIFVTSTLMEEGGVPPSSSPAVLLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLWYGYKGGKLKWLERFAYANTTIYPFTSIPLLAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRW 859          

HSP 2 Score: 25.7942 bits (55), Expect = 2.301e-86
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  580 GLVFEDWWRNEQ 615
            G+  E+WWRNEQ
Sbjct:  861 GVSIEEWWRNEQ 872          
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 4.763e-86
Identity = 148/191 (77.49%), Postives = 167/191 (87.43%), Query Frame = 2
Query:    5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYN-GRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574
            G S VFI +T ME GG+P + NP++L+KEAIHVISCGYE+KTEWGKEIGWIYGS+TEDILTGFKMH RGW SIYCMP RPAFKGSAPINLSDRL+QVLRWALG +EI LSRHCP+WYG + GRLKLL+RLAYINTIVYP TS+PL+AYCTLPA CLLT KFIIP +SN ASM F+ LFISI  T +LE+RW
Sbjct:  626 GLSTVFIESTLMENGGVPDSVNPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGCSGGRLKLLQRLAYINTIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRW 816          
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 8.688e-86
Identity = 144/191 (75.39%), Postives = 166/191 (86.91%), Query Frame = 2
Query:    5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGY-NGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574
            GQS  F+ +T ME+GG+PP+++PA+LLKEAIHVISCGYEDKT+WG E+GWIYGS+TEDILTGFKMH RGW S+YCMP R AFKGSAPINLSDRLNQVLRWALG +EI  SRH P+ YGY NG LK LER +YINT +YP TS+PL+AYCTLPA CLLT KFI+P IS FAS++FI LFISIFATGILE+RW
Sbjct:  696 GQSAAFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFSYINTTIYPFTSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRW 886          

HSP 2 Score: 25.7942 bits (55), Expect = 8.688e-86
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  580 GLVFEDWWRNEQ 615
            G+  E+WWRNEQ
Sbjct:  888 GVSIEEWWRNEQ 899          
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 8.688e-86
Identity = 144/191 (75.39%), Postives = 166/191 (86.91%), Query Frame = 2
Query:    5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGY-NGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574
            GQS  F+ +T ME+GG+PP+++PA+LLKEAIHVISCGYEDKT+WG E+GWIYGS+TEDILTGFKMH RGW S+YCMP R AFKGSAPINLSDRLNQVLRWALG +EI  SRH P+ YGY NG LK LER +YINT +YP TS+PL+AYCTLPA CLLT KFI+P IS FAS++FI LFISIFATGILE+RW
Sbjct:  696 GQSAAFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFSYINTTIYPFTSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRW 886          

HSP 2 Score: 25.7942 bits (55), Expect = 8.688e-86
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  580 GLVFEDWWRNEQ 615
            G+  E+WWRNEQ
Sbjct:  888 GVSIEEWWRNEQ 899          
The following BLAST results are available for this feature:
BLAST of DR403912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CESA4_ORYSJ1.613e-8776.96Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA4_ORYSI1.613e-8776.96Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA6_ORYSJ3.579e-8774.74Probable cellulose synthase A catalytic subunit 6 ... [more]
CESA3_ORYSJ1.763e-8675.26Probable cellulose synthase A catalytic subunit 3 ... [more]
CESA5_ORYSJ2.300e-8675.79Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA5_ORYSI2.300e-8675.79Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA7_ARATH2.301e-8674.87Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA8_ARATH4.763e-8677.49Cellulose synthase A catalytic subunit 8 [UDP-form... [more]
CESA9_ORYSJ8.688e-8675.39Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA9_ORYSI8.688e-8675.39Cellulose synthase A catalytic subunit 9 [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246K12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246K12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403912 ID=DR403912; Name=DR403912; organism=Citrus sinensis; type=EST; length=617bp
GGGTGGTCAATCCCCAGTTTTCATTGCAGCTACCTTCATGGAACAGGGAG
GCATTCCACCGACAACTAATCCTGCAAGTCTTCTAAAGGAAGCAATCCAT
GTTATTAGTTGTGGTTATGAGGACAAGACTGAATGGGGCAAAGAGATTGG
ATGGATCTATGGTTCTGTGACTGAAGATATCCTGACTGGGTTCAAGATGC
ATGCTCGTGGTTGGATATCAATCTATTGCATGCCACCACGCCCAGCATTT
AAGGGGTCTGCTCCCATAAATCTTTCTGATCGTTTGAACCAGGTTCTTCG
ATGGGCCTTGGGGCCAATTGAGATTTTGCTGAGCAGGCATTGCCCTATAT
GGTATGGCTACAATGGGAGATTGAAGCTTTTGGAGAGACTGGCGTACATT
AACACTATTGTCTACCCACTGACCTCCGTCCCACTAATTGCTTACTGCAC
GCTTCCTGCTTTTTGCCTTCTTACTAATAAATTCATCATTCCAGAGATAA
GCAACTTTGCTAGCATGTGGTTTATTCTACTTTTCATTTCCATTTTTGCT
ACTGGAATACTGGAGATTAGATGGAGGTGGGGTTGGTATTTGAGGACTGG
TGGAGGAATGAACAGTT
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