DR403912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1) HSP 1 Score: 317.005 bits (811), Expect = 1.613e-87 Identity = 147/191 (76.96%), Postives = 166/191 (86.91%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGY-NGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 G S VFI +T ME GG+P + NP++L+KEAIHVISCGYE+KTEWGKEIGWIYGSVTEDILTGFKMH RGW SIYCMP RPAFKGSAPINLSDRL+QVLRWALG +EI LSRHCP+WYGY GRLK L+RL+YINTIVYP TS+PLIAYC LPA CLLT KFIIP +SN A++WF+ LFISI T +LE+RW Sbjct: 631 GLSSVFIESTLMENGGVPESANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRW 821 HSP 2 Score: 27.335 bits (59), Expect = 1.613e-87 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ EDWWRNEQ Sbjct: 823 GIGIEDWWRNEQ 834
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2) HSP 1 Score: 317.005 bits (811), Expect = 1.613e-87 Identity = 147/191 (76.96%), Postives = 166/191 (86.91%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGY-NGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 G S VFI +T ME GG+P + NP++L+KEAIHVISCGYE+KTEWGKEIGWIYGSVTEDILTGFKMH RGW SIYCMP RPAFKGSAPINLSDRL+QVLRWALG +EI LSRHCP+WYGY GRLK L+RL+YINTIVYP TS+PLIAYC LPA CLLT KFIIP +SN A++WF+ LFISI T +LE+RW Sbjct: 631 GLSSVFIESTLMENGGVPESANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRW 821 HSP 2 Score: 27.335 bits (59), Expect = 1.613e-87 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ EDWWRNEQ Sbjct: 823 GIGIEDWWRNEQ 834
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1) HSP 1 Score: 316.235 bits (809), Expect = 3.579e-87 Identity = 142/190 (74.74%), Postives = 164/190 (86.32%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 GQS VF+A+T +E GG + +PASLLKEAIHVISCGYEDKT+WGKEIGWIYGS+TEDILTGFKMH GW SIYC+P RPAFKGSAP+NLSDRL+QVLRWALG +EI S+HCP+WYGY G LK LER +YIN+IVYP TS+PL+AYCTLPA CLLT KFI PE++N AS+WF+ LFI IF TGILE+RW Sbjct: 735 GQSSVFVASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSITEDILTGFKMHCHGWRSIYCIPKRPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSKHCPLWYGYGGGLKFLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFVTGILEMRW 924 HSP 2 Score: 26.9498 bits (58), Expect = 3.579e-87 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ +DWWRNEQ Sbjct: 926 GVAIDDWWRNEQ 937
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 1.763e-86 Identity = 143/190 (75.26%), Postives = 163/190 (85.79%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 GQS VF+A+T +E GG + +PASLLKEAIHVISCGYEDKT+WGKEIGWIYGSVTEDILTGFKMH GW SIYC+P PAFKGSAP+NLSDRL+QVLRWALG +EI S HCP+WYGY G LK LER +YIN+IVYP TS+PL+AYCTLPA CLLT KFI PE++N AS+WF+ LFI IFATGILE+RW Sbjct: 736 GQSSVFVASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKLPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPFTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFATGILEMRW 925 HSP 2 Score: 25.7942 bits (55), Expect = 1.763e-86 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ +DWWRNEQ Sbjct: 927 GVGIDDWWRNEQ 938
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 2.300e-86 Identity = 144/190 (75.79%), Postives = 163/190 (85.79%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 GQS VF+A+T +E GG + +PASLLKEAIHVISCGYEDKT+WGKEIGWIYGSVTEDILTGFKMH GW SIYC+P R AFKGSAP+NLSDRL+QVLRWALG IEI S HCP+WYGY G LK LER +YIN+IVYP TS+PL+AYCTLPA CLLT KFI PE++N AS+WF+ LFI IFATGILE+RW Sbjct: 735 GQSSVFVASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLRWALGSIEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRW 924 HSP 2 Score: 25.7942 bits (55), Expect = 2.300e-86 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ +DWWRNEQ Sbjct: 926 GVGIDDWWRNEQ 937
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 2.300e-86 Identity = 144/190 (75.79%), Postives = 163/190 (85.79%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 GQS VF+A+T +E GG + +PASLLKEAIHVISCGYEDKT+WGKEIGWIYGSVTEDILTGFKMH GW SIYC+P R AFKGSAP+NLSDRL+QVLRWALG IEI S HCP+WYGY G LK LER +YIN+IVYP TS+PL+AYCTLPA CLLT KFI PE++N AS+WF+ LFI IFATGILE+RW Sbjct: 735 GQSSVFVASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLRWALGSIEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRW 924 HSP 2 Score: 25.7942 bits (55), Expect = 2.300e-86 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ +DWWRNEQ Sbjct: 926 GVGIDDWWRNEQ 937
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 2.301e-86 Identity = 143/191 (74.87%), Postives = 165/191 (86.39%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGY-NGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 GQS +F+ +T ME+GG+PP+++PA LLKEAIHVISCGYEDKTEWG E+GWIYGS+TEDILTGFKMH RGW SIYCMP RPAFKGSAPINLSDRLNQVLRWALG +EI SRH P+WYGY G+LK LER AY NT +YP TS+PL+AYC LPA CLLT+KFI+P IS FAS++FI LF+SI TGILE+RW Sbjct: 669 GQSSIFVTSTLMEEGGVPPSSSPAVLLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLWYGYKGGKLKWLERFAYANTTIYPFTSIPLLAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRW 859 HSP 2 Score: 25.7942 bits (55), Expect = 2.301e-86 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ E+WWRNEQ Sbjct: 861 GVSIEEWWRNEQ 872
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1) HSP 1 Score: 317.005 bits (811), Expect = 4.763e-86 Identity = 148/191 (77.49%), Postives = 167/191 (87.43%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYN-GRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 G S VFI +T ME GG+P + NP++L+KEAIHVISCGYE+KTEWGKEIGWIYGS+TEDILTGFKMH RGW SIYCMP RPAFKGSAPINLSDRL+QVLRWALG +EI LSRHCP+WYG + GRLKLL+RLAYINTIVYP TS+PL+AYCTLPA CLLT KFIIP +SN ASM F+ LFISI T +LE+RW Sbjct: 626 GLSTVFIESTLMENGGVPDSVNPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGCSGGRLKLLQRLAYINTIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRW 816
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1) HSP 1 Score: 312.768 bits (800), Expect = 8.688e-86 Identity = 144/191 (75.39%), Postives = 166/191 (86.91%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGY-NGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 GQS F+ +T ME+GG+PP+++PA+LLKEAIHVISCGYEDKT+WG E+GWIYGS+TEDILTGFKMH RGW S+YCMP R AFKGSAPINLSDRLNQVLRWALG +EI SRH P+ YGY NG LK LER +YINT +YP TS+PL+AYCTLPA CLLT KFI+P IS FAS++FI LFISIFATGILE+RW Sbjct: 696 GQSAAFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFSYINTTIYPFTSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRW 886 HSP 2 Score: 25.7942 bits (55), Expect = 8.688e-86 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ E+WWRNEQ Sbjct: 888 GVSIEEWWRNEQ 899
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1) HSP 1 Score: 312.768 bits (800), Expect = 8.688e-86 Identity = 144/191 (75.39%), Postives = 166/191 (86.91%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGY-NGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 GQS F+ +T ME+GG+PP+++PA+LLKEAIHVISCGYEDKT+WG E+GWIYGS+TEDILTGFKMH RGW S+YCMP R AFKGSAPINLSDRLNQVLRWALG +EI SRH P+ YGY NG LK LER +YINT +YP TS+PL+AYCTLPA CLLT KFI+P IS FAS++FI LFISIFATGILE+RW Sbjct: 696 GQSAAFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFSYINTTIYPFTSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRW 886 HSP 2 Score: 25.7942 bits (55), Expect = 8.688e-86 Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ E+WWRNEQ Sbjct: 888 GVSIEEWWRNEQ 899 The following BLAST results are available for this feature:
BLAST of DR403912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403912 ID=DR403912; Name=DR403912; organism=Citrus sinensis; type=EST; length=617bpback to top |