DR403912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.029e-36 Identity = 74/188 (39.36%), Postives = 114/188 (60.64%), Query Frame = 2 Query: 11 SPVFIAATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 S + IAA E+ I P S+L+E ++C YED T+WGK++GW+Y TED++TGF++H GW S+YC AF+G+APINL++RL Q+LRW+ G +E+ S +CP+ G RL ++R+AYIN YP+TSV L+ Y P + F I + ++ +++ G++EI+W Sbjct: 523 SSIPIAAN-QERSIISPPALEESILQELSDAMACAYEDGTDWGKDVGWVYNIATEDVVTGFRLHRTGWRSMYCRMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSHNCPLLAG--RRLNFMQRIAYINMTGYPVTSVFLLFYLLFPVIWIFRGIFYIQKPFPTYVLYLVIVIFMSEMIGMVEIKW 707
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.827e-35 Identity = 70/164 (42.68%), Postives = 107/164 (65.24%), Query Frame = 2 Query: 83 LKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 + EA+ V + YE KT WG +IGW+YG+VTED++TG++MH +GW S YC AF G+APINL++RL QVLRW+ G +EI SR+ P++ + L L+R+AYIN YP T++ LI Y T+PA +T FI+ + ++ ++ ++ +LE++W Sbjct: 605 IAEAVMVTAAAYEKKTGWGSDIGWVYGTVTEDVVTGYRMHIKGWRSRYCSIYPHAFIGTAPINLTERLFQVLRWSTGSLEIFFSRNNPLF--GSTFLHPLQRVAYINITTYPFTALFLIFYTTVPALSFVTGHFIVQRPTTMFYVYLAIVLGTLLILAVLEVKW 766
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.032e-34 Identity = 65/165 (39.39%), Postives = 106/165 (64.24%), Query Frame = 2 Query: 83 LKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTN-KFIIPEISNFASMWFILLFISIFATGILEIRW 574 + E V++C YED TEWG +GW+Y TED++TGF++H +GW S+YC AF+G+APINL++RL Q+LRW+ G +E+ SR+CP+ G RL+ ++R+AY N YP++++ ++ Y LP L + +F I + + + + + I G++EI+W Sbjct: 534 MAEVEEVMTCAYEDGTEWGDGVGWVYDIATEDVVTGFRLHRKGWRSMYCAMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSRNCPLLAGC--RLRPMQRVAYANMTAYPVSALFMVVYDLLPVIWLSHHGEFHIQKPFSTYVAYLVAVIAMIEVIGLVEIKW 696 HSP 2 Score: 26.1794 bits (56), Expect = 2.032e-34 Identity = 9/12 (75.00%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 GL DWWRNEQ Sbjct: 698 GLTLLDWWRNEQ 709
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 9.754e-31 Identity = 62/178 (34.83%), Postives = 102/178 (57.30%), Query Frame = 2 Query: 41 EQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 E+ PP S+ ++ V +CGY+ T WG++ GW+Y TED+ TGF+MH +GW S+Y AF+G+APINL++RL Q+LRW+ G +E+ S + G RL L+R+AY+N YP+ +V + Y P L++ ++ I + ++ + + I G+ E++W Sbjct: 543 ERSITPPVAIDGSVARDLAAVTACGYDLGTSWGRDAGWVYDIATEDVATGFRMHQQGWRSVYTSMEPAAFRGTAPINLTERLYQILRWSGGSLEMFFSHSNALLAG--RRLHPLQRIAYLNMSTYPIVTVFIFFYNLFPVMWLISEQYYIQQPFGEYLLYLVAIIAMIHVIGMFEVKW 718
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 9.754e-31 Identity = 65/195 (33.33%), Postives = 110/195 (56.41%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIH-----VISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 G S F+ T ++ + P ++L E++ + +C YED T WG+++GW+Y TED++TGF+MH +GW S+Y AF+G+APINL++RL Q+LRW+ G +E+ S + G RL L+R+AY+N YP+ +V + Y P L++ ++ I ++ + + I G+ E++W Sbjct: 518 GSSTSFVG-TMLDGANQERSITPLAVLDESVAGDLAALTACAYEDGTSWGRDVGWVYNIATEDVVTGFRMHRQGWRSVYASVEPAAFRGTAPINLTERLYQILRWSGGSLEMFFSHSNALLAG--RRLHPLQRVAYLNMSTYPIVTVFIFFYNLFPVMWLISEQYYIQRPFGEYLLYLVAVIAMIHVIGMFEVKW 709
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 9.754e-31 Identity = 65/195 (33.33%), Postives = 110/195 (56.41%), Query Frame = 2 Query: 5 GQSPVFIAATFMEQGGIPPTTNPASLLKEAIH-----VISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 G S F+ T ++ + P ++L E++ + +C YED T WG+++GW+Y TED++TGF+MH +GW S+Y AF+G+APINL++RL Q+LRW+ G +E+ S + G RL L+R+AY+N YP+ +V + Y P L++ ++ I ++ + + I G+ E++W Sbjct: 488 GSSTSFVG-TMLDGANQERSITPLAVLDESVAGDLAALTACAYEDGTSWGRDVGWVYNIATEDVVTGFRMHRQGWRSVYASVEPAAFRGTAPINLTERLYQILRWSGGSLEMFFSHSNALLAG--RRLHPLQRVAYLNMSTYPIVTVFIFFYNLFPVMWLISEQYYIQRPFGEYLLYLVAVIAMIHVIGMFEVKW 679
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.240e-30 Identity = 60/158 (37.97%), Postives = 103/158 (65.19%), Query Frame = 2 Query: 101 VISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 V+S ++ +T+WGK +G+IY TEDI+TGF++H +GW S+YC AF G+APINL++RL+Q++RW+ G +E+ S + P+ G RL+ L+R++Y+N +YP+TS+ ++ Y P L+ ++ I ++ +++ + I G LEI+W Sbjct: 548 VVSASFDKETDWGKGVGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNPLIGG--RRLQPLQRVSYLNMTIYPVTSLFILLYAISPVMWLIPDEVYIQRPFTRYVVYLLMIILMIHMIGWLEIKW 703 HSP 2 Score: 22.3274 bits (46), Expect = 1.240e-30 Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ + D+WRNEQ Sbjct: 705 GITWLDYWRNEQ 716
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.614e-30 Identity = 60/158 (37.97%), Postives = 103/158 (65.19%), Query Frame = 2 Query: 101 VISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRW 574 V+S ++ +T+WGK +G+IY TEDI+TGF++H +GW S+YC AF G+APINL++RL+Q++RW+ G +E+ S + P+ G RL+ L+R++Y+N +YP+TS+ ++ Y P L+ ++ I ++ +++ + I G LEI+W Sbjct: 548 VVSASFDKETDWGKGVGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNPLIGG--RRLQPLQRVSYLNMTIYPVTSLFILLYAISPVMWLIPDEVYIQRPFTRYVVYLLVIILMIHMIGWLEIKW 703 HSP 2 Score: 22.3274 bits (46), Expect = 1.614e-30 Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 580 GLVFEDWWRNEQ 615 G+ + D+WRNEQ Sbjct: 705 GITWLDYWRNEQ 716
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3) HSP 1 Score: 124.02 bits (310), Expect = 5.918e-28 Identity = 68/169 (40.24%), Postives = 98/169 (57.99%), Query Frame = 2 Query: 59 PTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILE 565 P + +S ++ A V +C Y+ T WG+E+GW+YGS+TEDILTG ++HA GW S+ + PAF GSAPI L Q RWA G EI++SR+ PI RLK + LAY+ + +PL + + Y L +C+LTN+ +P+ S + LFIS +E Sbjct: 431 PMVDISSRIEVAKAVSACNYDIGTCWGQEVGWVYGSLTEDILTGQRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWATGQSEIIISRNNPILATMFKRLKFRQCLAYLIVLGWPLRAPFELCYGLLGPYCILTNQSFLPKASEDGFSVPLALFISYNTYNFME 599
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.918e-28 Identity = 68/169 (40.24%), Postives = 98/169 (57.99%), Query Frame = 2 Query: 59 PTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILE 565 P + +S ++ A V +C Y+ T WG+E+GW+YGS+TEDILTG ++HA GW S+ + PAF GSAPI L Q RWA G EI++SR+ PI RLK + LAY+ + +PL + + Y L +C+LTN+ +P+ S + LFIS +E Sbjct: 431 PMVDISSRIEVAKAVSACNYDIGTCWGQEVGWVYGSLTEDILTGQRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWATGQSEIIISRNNPILATMFKRLKFRQCLAYLIVLGWPLRAPFELCYGLLGPYCILTNQSFLPKASEDGFSVPLALFISYNTYNFME 599 The following BLAST results are available for this feature:
BLAST of DR403912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403912 ID=DR403912; Name=DR403912; organism=Citrus sinensis; type=EST; length=617bpback to top |