DR403912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.364e-24 Identity = 58/146 (39.73%), Postives = 85/146 (58.22%), Query Frame = 2 Query: 59 PTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPE 496 P + A+L++ A V C YE +T WG +GW+Y SV ED T +H RGW S + P PAF GS P + + Q RWA G IE+L ++ P+ G+ ++K +RLAY ++ + S+P + YC LPA+CLL N + P+ Sbjct: 422 PQKSLANLVEAAQEVGHCHYEYQTSWGN-LGWLYDSVAEDTNTSIGIHLRGWTSSFISPDPPAFLGSTPSVGPEAIVQHRRWATGSIEVLFNKQSPL-IGFRRKIKFRQRLAYF-WVLMCIRSIPELVYCLLPAYCLLNNSALFPK 564
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 1.155e-23 Identity = 61/161 (37.89%), Postives = 86/161 (53.42%), Query Frame = 2 Query: 59 PTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFIS 541 P + +S ++ A V SC YE T WG E+GW YGS+TEDILTG ++HA GW S PAF G AP L Q RWA G EIL+S++ P+ L+ + LAY+ V+ + + Y L +CLLTN+ + + S + LF++ Sbjct: 462 PIVDISSHIEVAKEVSSCNYESGTHWGLEVGWAYGSMTEDILTGQRIHAAGWRSAKLETEPPAFLGCAPTGGPACLTQFKRWATGLFEILISQNNPLLLSIFKHLQFRQCLAYLTLYVWAVRGFVELCYELLVPYCLLTNQSFLSKASENCFNITLALFLT 622
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 2.845e-22 Identity = 54/160 (33.75%), Postives = 90/160 (56.25%), Query Frame = 2 Query: 86 KEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILE 565 ++A +++C YE +T+WG +IG YG EDI+TG +H RGW S + P R AF G AP L+ + Q RW+ G + I LS++C +G+ G++KL ++ Y ++ S+P + Y +P+ L+ + P+I + + FI +F G+ E Sbjct: 421 EKATSLVTCTYEHRTQWGNDIGVKYGFPAEDIITGLAIHCRGWESAFINPKRAAFLGLAPSTLAQNILQHKRWSEGNLTIFLSKYCSFLFGH-GKIKLQLQMGYCICGLWAANSLPTLYYVVIPSLGLVKGTPLFPQIMSPWATPFIYVFCVKTLYGLYE 579
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.412e-21 Identity = 55/150 (36.67%), Postives = 84/150 (56.00%), Query Frame = 2 Query: 86 KEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLF 535 ++A + +C YE +T+WG EIG YG ED++TG +H RGW S+Y P R AF G AP L+ + Q RW+ G I LS+H +G+ G++ L ++ Y ++ S+P I Y +PA L+ + PEI + + FI +F Sbjct: 416 EKAKSLATCTYELRTQWGNEIGVKYGCPVEDVITGLAIHCRGWESVYMEPQRAAFVGVAPATLAQTILQHKRWSEGNFTIFLSKHNTFLFGH-GKISLQLQMGYCIYGLWAANSLPTIYYVMIPALGLVKGTPLFPEIMSPWATPFIYVF 564
BLAST of DR403912 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.944e-19 Identity = 52/142 (36.62%), Postives = 75/142 (52.82%), Query Frame = 2 Query: 101 VISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGPIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPLTSVPLIAYCTLPAFCLLTNKFIIPEISNFASMWFI 526 +++C YE T WG E G YG ED+ TG ++ RGW S+Y P R F G P +L L RW G ++I LSR+ P G+ G++KL ++ Y + + S P + Y T+P+ C L + PE + S WFI Sbjct: 433 LVTCTYEHNTIWGIEKGVRYGCPLEDVTTGLQIQCRGWRSVYYNPKRKGFLGMTPTSLGQILVLYKRWTEGFLQISLSRYSPFLLGH-GKIKLGLQMGYSVCGFWAVNSFPTLYYVTIPSLCFLNGISLFPEKT---SPWFI 570 The following BLAST results are available for this feature:
BLAST of DR403912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403912 ID=DR403912; Name=DR403912; organism=Citrus sinensis; type=EST; length=617bpback to top |