CX069546
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_NASOF (Putative membrane protein ycf1 OS=Nasturtium officinale GN=ycf1-A PE=3 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 5.736e-71 Identity = 145/278 (52.16%), Postives = 184/278 (66.19%), Query Frame = -1 Query: 2 GKKEADLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 835 GKK+ FI +K+ N +KEE E A Q SD +K++ S LSN EK+ EENY S +K R KKQ K TE +LD FL RY QLRW F +KILN+++VYC LVRL NP+++AI+SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI+LVHKNK KI KRY++K Y++KK ++ I K+Q T NR KNHYD VPE IL PKRRRE R LICFN K +N +N F N + VLD K+L Sbjct: 1476 GKKKG--FIPSNEKKSLRFFNLNKEEKESAGQVELESDKEKKINPESALSNHEKNIEENYEESTIKKRKNKKQYKSNTEAELDLFLTRYSRFQLRWNSF--FNQKILNNVKVYCLLVRLKNPNEIAISSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQRIIYRTIGISLVHKNKHKINKRYKKKSYIEKKTIEKSITKYQNKTVNRKKNHYDFFVPENILSPKRRREFRILICFNLKKKNARDRNSRFNKNIQNLTTVLDTKKDL 1749
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_POPAL (Putative membrane protein ycf1 OS=Populus alba GN=ycf1 PE=3 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 2.847e-70 Identity = 146/277 (52.71%), Postives = 185/277 (66.79%), Query Frame = -1 Query: 8 KKEADLFISPTQKEY--FELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNK 832 KK D FIS + E +L NQ+ EE E DQ V L SVL NQEKD EE+Y SD K R KKKQ K TE +LDF LKRYLC QLRW S EKI+N++++YC L+RL NP ++ I+SIQRGE+SL IL+ +K L EL K G+LIIE RLSVKNDG+F +YQ + I LVHK K++I +RY++K Y+DKK+F E I +Q +T N++KN+YDLLVPE +L K RRELR LI FNSKN N + + NN K ++DK+K Sbjct: 1501 KKNNDPFISISSNETKSIQLKNQNHEEKESEDQ----------VDLESVLVNQEKDVEEDYVRSDRKERRKKKQYKSNTEAELDFLLKRYLCFQLRWDD--SLNEKIINNIKIYCLLLRLTNPREIIISSIQRGELSLDILMIQKDLTLTELMKKGILIIESTRLSVKNDGKFIMYQTINILLVHKRKQQINQRYRKKNYIDKKNFTESIVINQSLTRNKDKNNYDLLVPENLLSSKHRRELRILISFNSKNGNDINTEIINNNNIKNHAHIIDKSK 1765
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_POPTR (Putative membrane protein ycf1 OS=Populus trichocarpa GN=ycf1-A PE=3 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 2.410e-69 Identity = 144/278 (51.80%), Postives = 185/278 (66.55%), Query Frame = -1 Query: 5 KKEADLFISPTQKEY--FELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKN 832 KK D FIS + E +L NQ+ EE E DQ V L SVL NQEKD EE+Y SD K R KKKQ K TE +LDF LKRYLC QLRW S +KI+N++++YC L+RL NP ++ I+SIQRGE+SL IL+ +K L EL K G+LIIE RLSVKNDG+F +YQ + I LVHK K++I +RY++K Y+DKK+F+E I +Q +T N++KN+YDL VPE +L K RRELR LI FNSKN N + + NN K ++DK K+ Sbjct: 1503 KKNNDPFISISSNETKSIQLKNQNHEEKESEDQ----------VDLESVLVNQEKDVEEDYVRSDRKERRKKKQYKSNTEAELDFLLKRYLCFQLRWDD--SLNQKIINNIKIYCLLLRLTNPREIIISSIQRGELSLDILMIQKDLTLTELMKKGILIIESTRLSVKNDGKFIMYQTINILLVHKRKQQINQRYRKKNYIDKKNFNESIVINQSLTRNKDKNNYDLPVPENLLSSKHRRELRILISFNSKNGNDINTEIINNNNIKNHAHIIDKRKH 1768
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_OLIPU (Putative membrane protein ycf1 OS=Olimarabidopsis pumila GN=ycf1-A PE=3 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 5.368e-69 Identity = 141/271 (52.03%), Postives = 180/271 (66.42%), Query Frame = -1 Query: 2 FISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 814 FI +K+ N +KEE E A Q SD +K+ S L NQEK+ EENY S +K R KKQ K +E +LD FL RY QLRW F +KILN+++VYC LVRL NP+++AI+SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI+LVHKNK KI+KRY++K Y+DKK ++ I K+QK T NR KN+YD VPE IL PKRRRE R LICFN K + +N F N + VL K K+L Sbjct: 1473 FIPSNEKKSLRFYNLTKEEKESAGQVELESDKEKKRNPESALLNQEKNIEENYAESTIKKRKNKKQYKSNSEAELDLFLTRYSRFQLRWN--CFFNQKILNNVKVYCLLVRLKNPNEIAISSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPIRLSVQNDGQLIIYRTIGISLVHKNKHKISKRYKKKSYIDKKKIEKSITKYQKKTVNRKKNNYDFFVPENILSPKRRREFRILICFNLKKKTVRDRNSRFDKNIQNWTTVLHKKKDL 1741
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_BARVE (Putative membrane protein ycf1 OS=Barbarea verna GN=ycf1-A PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.255e-67 Identity = 138/271 (50.92%), Postives = 178/271 (65.68%), Query Frame = -1 Query: 2 FISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 814 FI +K+ N +KEE E A Q SD + + S L QEK+ EENY S +K R KKQ K TE +LD FL R+ QLRW F +KILN+++VYC LVRL NP+++AI+SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI+LVHKNK KI++RY++K Y DK+ ++ I K+Q T NR KN+YD VPE IL PKRRRE R LICFN K +N +N F N + VLDK K+L Sbjct: 1470 FIPSNEKKSLRFYNLNKEEKESASQVELESDKENKKNPESALLKQEKNIEENYAESTIKKRKNKKQYKSNTEAELDLFLTRHSRFQLRWN--CFFNQKILNNVKVYCLLVRLKNPNEIAISSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQLIIYRTIGISLVHKNKHKISQRYKKKSYSDKQKIEKSITKYQNKTVNRKKNNYDFFVPENILSPKRRREFRILICFNLKKKNARDRNSRFDKNIQNLTTVLDKKKDL 1738
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_CRUWA (Putative membrane protein ycf1 OS=Crucihimalaya wallichii GN=ycf1-A PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 5.025e-67 Identity = 140/273 (51.28%), Postives = 179/273 (65.57%), Query Frame = -1 Query: 2 FISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKR--KITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 814 FI +K+ N +K+E E Q SD ++Q S LSNQEK+ EENY S +K R KKQ K TE +LD FL RY QLRW F +KIL++++VYC LVRL NP+++AI+SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI+LVHKNK KI+KRY++K Y+DKK D+ I K+Q T NR KN+YD VPE IL PKRRRE R LICFN K + +N F N + VL K K+L Sbjct: 1472 FIQSNEKKSRRFYNLNKDEKESTGQVEFESDKEQQRNSESALSNQEKNIEENYAESTIKKRKNKKQYKSNTEAELDLFLTRYSRFQLRWN--CFFNQKILDNVKVYCLLVRLKNPNEIAISSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQLIIYRTIGISLVHKNKNKDKISKRYKKKSYIDKKKIDKSITKYQNKTVNRKKNNYDFFVPENILSPKRRREFRILICFNFKKKTARDRNSRFDKNIQNLPTVLHKKKDL 1742
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_ARATH (Putative membrane protein ycf1 OS=Arabidopsis thaliana GN=ycf1-A PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 6.562e-67 Identity = 137/271 (50.55%), Postives = 178/271 (65.68%), Query Frame = -1 Query: 2 FISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 814 FI +KE N +KEE E A Q SD + + + NQEK+ EEN+ S +K R KKQ K TE +LD FL RY QLRW F +KILN+++VYC LVRL NP+++A++SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI+LVHKNK KI+KRY++K Y++KK F++ I K+Q T N+ KN+YD VPE IL PKRRRE R LICFN K +N N F N + VL K K+L Sbjct: 1463 FIPSNEKESLRFYNLNKEEKESAGQVELESDKETKRNPEAARLNQEKNIEENFAESTIKKRKNKKQYKSNTEAELDLFLTRYSRFQLRWN--CFFNQKILNNVKVYCLLVRLNNPNEIAVSSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQLIIYRTIGISLVHKNKHKISKRYKKKSYINKKFFEKSITKYQNKTVNKKKNNYDFFVPEKILSPKRRREFRILICFNLKKKNARDTNSRFDKNIQNLTTVLHKKKDL 1731
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_CAPBU (Putative membrane protein ycf1 OS=Capsella bursa-pastoris GN=ycf1-A PE=3 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 8.571e-67 Identity = 139/271 (51.29%), Postives = 176/271 (64.94%), Query Frame = -1 Query: 2 FISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 814 FI +K+ N +KEE E A Q SD +K+ S L NQEK+ EEN+ S +K R KKQ K TE +LD FL RY QLRW F +KILN+++VYC LVRL NP+++AI+SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI LVHKNK KI+KR ++K Y+DKK F++ K+Q T NR K HYD VPE IL PKRRRE R LICFN K + +N F N + VL K K+L Sbjct: 1468 FIPSNEKKSLRFYNLNKEEKESAGQFELESDKEKKRNPESALLNQEKNIEENFAESMIKKRQNKKQYKSNTEAELDLFLTRYSRFQLRWN--CFFNQKILNNVKVYCLLVRLNNPNEIAISSIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQLIIYRTIGIPLVHKNKHKISKRSKKKSYIDKKIFEKSKTKYQNKTVNRKKKHYDFFVPENILSPKRRREFRILICFNLKKKTARDRNSRFDKNIQNLTTVLHKKKDL 1736
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_LIRTU (Putative membrane protein ycf1 OS=Liriodendron tulipifera GN=ycf1 PE=3 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.462e-66 Identity = 136/277 (49.10%), Postives = 191/277 (68.95%), Query Frame = -1 Query: 5 KEADLFISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVLDKNKN 829 ++ DL +S QKEY EL N+++EE E QG LGS N++KD E++Y SD+K R KK+QSK E +L+FFLKRYL QLRW ++ ++++N+++VYC L+RLINP ++AI+SIQRGEM L +++ +K L EL K G+LIIEP RLS+K DGQ+ +YQ +GI+LVHKNK + + +EK YVD+ FD IA+H K+ N ++N+Y LLVPE I P+RRRELR LIC NS+N N + +N VFF NN + + LD++K+ Sbjct: 1517 QKKDLRLSSNQKEYLELENRNQEEKEQLGQGN----------LGSDPRNRQKDLEKDYAESDIKKRRKKRQSKSNKEAELNFFLKRYLLFQLRWDDPLN--QRMINNIKVYCLLLRLINPKEIAISSIQRGEMRLDVMLIQKDLTLTELIKRGILIIEPVRLSIKWDGQWIMYQTIGISLVHKNKYQTNRICREKKYVDENSFDRSIAQHGKVLVNGDENNYALLVPENIPSPRRRRELRILICLNSENGNVVDRNSVFFNGNNVRNCVQFLDEDKH 1781
BLAST of CX069546 vs. ExPASy Swiss-Prot
Match: YCF1_NICTO (Putative membrane protein ycf1 OS=Nicotiana tomentosiformis GN=ycf1-A PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.238e-65 Identity = 140/280 (50.00%), Postives = 187/280 (66.79%), Query Frame = -1 Query: 2 KEADLFISPTQKEYFELSNQSKEENELADQGTPR--SDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVLDKNKNL 829 K+ + F+ +K + N+ +EE E A QG SD + + LG VLS + +++YT SD K KKKQ K TE +LD FLKRYL QLRW A++ ++++ +++VYC L+RLINPS +AI+SIQR EMSL I++ +K L EL K G+LIIEP RLSVKN+GQF +YQ +GI+LVHK+K + +RY E+ YVDKK+FDEFI + Q N +KNH+DLLVPE IL +RRRELR FNS N NG+ +N VF NN K + LD+ K L Sbjct: 1566 KKQNFFLRSNKK----IKNRIQEEKEPASQGEKERGSDIENKGNLGPVLSKHQNALKKDYTESDTKKGKKKKQYKSNTEAELDLFLKRYLLFQLRWNDALN--QRMIENIKVYCLLLRLINPSKIAISSIQRREMSLDIMLIQKNLTLTELMKKGILIIEPIRLSVKNNGQFIMYQTIGISLVHKSKHQTNQRYPEQRYVDKKNFDEFILQPQTQRINTDKNHFDLLVPENILWSRRRRELRIRSFFNSLNWNGVDRNSVFCNENNVKNWSQFLDERKPL 1839 The following BLAST results are available for this feature:
BLAST of CX069546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069546 ID=CX069546; Name=CX069546; organism=Citrus sinensis; type=EST; length=835bpback to top |