DR403905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_CYAP7 (50S ribosomal protein L11 OS=Cyanothece sp. (strain PCC 7424) GN=rplK PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.108e-45 Identity = 86/125 (68.80%), Postives = 105/125 (84.00%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 AGKA PAPPVGPALG GVNIMAFCK+YN +T+D+ G VIPVEI+V++DRSFTF+LKTPPASVL+ KAAGVE+GS +P ++ VG IT +QLR IA K+PDLN IE+AM+I+AGTA NMGI + Sbjct: 15 AGKANPAPPVGPALGQHGVNIMAFCKEYNGKTSDQVGMVIPVEISVFEDRSFTFVLKTPPASVLIRKAAGVERGSNEPNKKNVGSITQDQLREIAQTKMPDLNANDIEAAMKIVAGTARNMGISV 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_SYNS9 (50S ribosomal protein L11 OS=Synechococcus sp. (strain CC9902) GN=rplK PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.596e-45 Identity = 89/126 (70.63%), Postives = 103/126 (81.75%), Query Frame = 1 Query: 280 EAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 +AGKA PAPPVGPALG GVNIM FCK+YNART DKAG VIPVEI+V++DRSFTFI KTPPASVL+ KAAG+EKGS D + VG I+ QL IA KLPDLNC+S++SAMRII GTA NMG+ + Sbjct: 14 QAGKANPAPPVGPALGQHGVNIMMFCKEYNARTQDKAGLVIPVEISVFEDRSFTFITKTPPASVLITKAAGIEKGSGDSAKGSVGSISRAQLEEIAKTKLPDLNCSSVDSAMRIIEGTARNMGVAV 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_CYAA5 (50S ribosomal protein L11 OS=Cyanothece sp. (strain ATCC 51142) GN=rplK PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.596e-45 Identity = 86/126 (68.25%), Postives = 105/126 (83.33%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 660 AGKA PAPPVGPALG GVNIMAFCK+YNA+T+D+AG VIPVEI+V++DRSFTF+LKTPPASVL+ KAAG+EKGS P QKVG I+ +QL+ IA K+PDLN I++AM I+ GTA NMG+ I+ Sbjct: 15 AGKANPAPPVGPALGQHGVNIMAFCKEYNAKTSDQAGMVIPVEISVFEDRSFTFVLKTPPASVLIRKAAGIEKGSAQPNNQKVGSISRDQLKEIAQTKMPDLNANDIDAAMNIVEGTARNMGVTIN 140
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_PROM9 (50S ribosomal protein L11 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplK PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.696e-45 Identity = 86/126 (68.25%), Postives = 105/126 (83.33%), Query Frame = 1 Query: 280 EAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 +AGKA PAPPVGPALG GVNIMAFCK+YNA+T DKAG+VIPVEI+V++DRSFTFI KTPPA+VL+ KAAG++KGS + + VG I+ QL IA KLPDLNC+S+ESAM++I GTA NMG+ I Sbjct: 14 QAGKANPAPPVGPALGQHGVNIMAFCKEYNAKTQDKAGFVIPVEISVFEDRSFTFITKTPPAAVLITKAAGIDKGSGESSKGSVGNISKAQLEEIAKTKLPDLNCSSVESAMKVIEGTARNMGVSI 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_NOSP7 (50S ribosomal protein L11 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplK PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.696e-45 Identity = 88/125 (70.40%), Postives = 105/125 (84.00%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 AGKA PAPPVGPALG GVNIM FCK+YNA+TAD+AG VIPVEI+V++DRSFTF+LKTPPASVL+ KAA VEKGS +P ++KVG IT QL+ IA KLPDLN I++AM+I+AGTA NMGI + Sbjct: 15 AGKANPAPPVGPALGQHGVNIMMFCKEYNAKTADQAGMVIPVEISVFEDRSFTFVLKTPPASVLIRKAAKVEKGSNEPNKKKVGSITKAQLQEIAQTKLPDLNANDIDAAMKIVAGTAKNMGITV 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RK11_PORYE (50S ribosomal protein L11, chloroplastic OS=Porphyra yezoensis GN=rpl11 PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 6.133e-45 Identity = 88/123 (71.54%), Postives = 103/123 (83.74%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGI 651 AGKATPAPPVGPALG GVNI+ FCK+YNARTADK+G VIPVEI++Y+DRSFTFILKTPPASVL+ KAAG+ KGS +P +KVG IT +QL +IA KLPDLN +I AM+I+ GTA NMGI Sbjct: 15 AGKATPAPPVGPALGQHGVNIVMFCKEYNARTADKSGLVIPVEISIYEDRSFTFILKTPPASVLIAKAAGLNKGSGEPNTKKVGSITNKQLESIAETKLPDLNTNNIPQAMKIVGGTAKNMGI 137
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RK11_PORPU (50S ribosomal protein L11, chloroplastic OS=Porphyra purpurea GN=rpl11 PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.046e-44 Identity = 87/126 (69.05%), Postives = 105/126 (83.33%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 660 AGKATPAPPVGPALG GVNI+ FCK+YNARTADK G VIPVEI+VY+DRSF+FILKTPPASVL++KAAG+ KGS +P +K+G IT +QL +IA KLPDLN ++ AM+I+ GTA NMGI I+ Sbjct: 15 AGKATPAPPVGPALGQHGVNIVMFCKEYNARTADKTGLVIPVEISVYEDRSFSFILKTPPASVLIVKAAGLNKGSGEPNIKKIGSITTKQLESIAETKLPDLNTNNLSQAMKIVGGTAKNMGILIE 140
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_THEP1 (50S ribosomal protein L11 OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=rplK PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.366e-44 Identity = 85/125 (68.00%), Postives = 106/125 (84.80%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 AGKATPAPPVGPALG GVNIM FCK +NA TADKAG ++PV ITVY+D+SFTFI+KTPPAS LL+KAAG+EKGS +PK++ VGK+T +Q+ IA K+PDLN S+E+AM+II GTA +MGI++ Sbjct: 15 AGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKAGMILPVVITVYEDKSFTFIIKTPPASFLLMKAAGLEKGSSEPKRKIVGKVTRKQIEEIARTKMPDLNANSLEAAMKIIEGTAKSMGIEV 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_CLOAB (50S ribosomal protein L11 OS=Clostridium acetobutylicum GN=rplK PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.366e-44 Identity = 86/125 (68.80%), Postives = 106/125 (84.80%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 AGKATPAPPVGPALG GVNIMAFCK+YNA+TA++AG+ IPV ITVY DRSF+FILKTPPA+VL+ KAAG+E GS P + KVGKIT EQ++ IA K+PDLN S+E+AM +IAGTA +MG+++ Sbjct: 15 AGKATPAPPVGPALGQHGVNIMAFCKEYNAKTANQAGFTIPVVITVYQDRSFSFILKTPPAAVLIKKAAGIESGSGVPNKNKVGKITKEQVKEIAQTKMPDLNAASLEAAMSMIAGTARSMGVEV 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_PROMT (50S ribosomal protein L11 OS=Prochlorococcus marinus (strain NATL2A) GN=rplK PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.784e-44 Identity = 86/126 (68.25%), Postives = 103/126 (81.75%), Query Frame = 1 Query: 280 EAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 +AGKA PAPPVGPALG GVNIMAFCK+YN+RT DKAG+VIPVEI+V++DRSF+FI KTPPASVL+ KAAG+ KGS + + G I+ QL IA KLPDLNC+SIESAM++I GTA NMG+ I Sbjct: 14 QAGKANPAPPVGPALGQHGVNIMAFCKEYNSRTQDKAGFVIPVEISVFEDRSFSFITKTPPASVLITKAAGIAKGSGESAKGSAGSISTSQLEEIAKTKLPDLNCSSIESAMKVIEGTAKNMGVSI 139 The following BLAST results are available for this feature:
BLAST of DR403905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403905 ID=DR403905; Name=DR403905; organism=Citrus sinensis; type=EST; length=766bpback to top |