DR403905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_PROM1 (50S ribosomal protein L11 OS=Prochlorococcus marinus (strain NATL1A) GN=rplK PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.784e-44 Identity = 86/126 (68.25%), Postives = 103/126 (81.75%), Query Frame = 1 Query: 280 EAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 +AGKA PAPPVGPALG GVNIMAFCK+YN+RT DKAG+VIPVEI+V++DRSF+FI KTPPASVL+ KAAG+ KGS + + G I+ QL IA KLPDLNC+SIESAM++I GTA NMG+ I Sbjct: 14 QAGKANPAPPVGPALGQHGVNIMAFCKEYNSRTQDKAGFVIPVEISVFEDRSFSFITKTPPASVLITKAAGIAKGSGESAKGSAGSISTSQLEEIAKTKLPDLNCSSIESAMKVIEGTAKNMGVSI 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_THESQ (50S ribosomal protein L11 OS=Thermotoga sp. (strain RQ2) GN=rplK PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.331e-44 Identity = 85/125 (68.00%), Postives = 105/125 (84.00%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 AGKATPAPPVGPALG GVNIM FCK +NA TADKAG ++PV ITVY+D+SFTFI+KTPPAS LL KAAG+EKGS +PK++ VGK+T +Q+ IA K+PDLN S+E+AM+II GTA +MGI++ Sbjct: 15 AGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKAGMILPVVITVYEDKSFTFIIKTPPASFLLKKAAGIEKGSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKIIEGTAKSMGIEV 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_THEMA (50S ribosomal protein L11 OS=Thermotoga maritima GN=rplK PE=1 SV=3) HSP 1 Score: 179.104 bits (453), Expect = 2.331e-44 Identity = 85/125 (68.00%), Postives = 105/125 (84.00%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 AGKATPAPPVGPALG GVNIM FCK +NA TADKAG ++PV ITVY+D+SFTFI+KTPPAS LL KAAG+EKGS +PK++ VGK+T +Q+ IA K+PDLN S+E+AM+II GTA +MGI++ Sbjct: 15 AGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKAGMILPVVITVYEDKSFTFIIKTPPASFLLKKAAGIEKGSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKIIEGTAKSMGIEV 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_ACAM1 (50S ribosomal protein L11 OS=Acaryochloris marina (strain MBIC 11017) GN=rplK PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.331e-44 Identity = 85/125 (68.00%), Postives = 104/125 (83.20%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 AGKA PAPP+GPALG GVNIM FCK+YNA+T+D+AG V+PVEI+VY+DRSFTFILKTPPASVL+ KAAG+EKGS +P +VG+IT QL+ IA K+PDLN IE+AM I+AGTA NMG+ + Sbjct: 15 AGKANPAPPIGPALGQHGVNIMMFCKEYNAKTSDQAGLVVPVEISVYEDRSFTFILKTPPASVLIKKAAGIEKGSGEPNAVQVGQITKAQLQEIAQTKMPDLNANDIEAAMNIVAGTARNMGVAV 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_FRASC (50S ribosomal protein L11 OS=Frankia sp. (strain CcI3) GN=rplK PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.044e-44 Identity = 89/125 (71.20%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 AGKATPAPPVGPALG GVNIM FCK YNA T +AG V+PVEITVYDDRSFTF+ KTPPA+ L+LKAAGVEKGS P + KV K+T Q+R IA KLPDLN TSIE+A +IIAGTA +MGI + Sbjct: 18 AGKATPAPPVGPALGQHGVNIMEFCKQYNAATESQAGNVVPVEITVYDDRSFTFVTKTPPAARLILKAAGVEKGSGTPHRDKVAKLTTAQIREIAQTKLPDLNATSIEAAEKIIAGTARSMGITV 142
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_CLOB8 (50S ribosomal protein L11 OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=rplK PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.192e-44 Identity = 85/127 (66.93%), Postives = 106/127 (83.46%), Query Frame = 1 Query: 280 EAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 660 +AGKATPAPPVGPALG GVNIM FCK++NA+TA++AGY+IPV ITVY DRSF+FILKTPPA+VL+ K G+E GS P + KVGK+T +QL+ IA K+PDLN S+ESAMR+IAGTA +MG+ I+ Sbjct: 14 QAGKATPAPPVGPALGQHGVNIMGFCKEFNAKTANQAGYIIPVVITVYQDRSFSFILKTPPAAVLIKKEIGLESGSGVPNKTKVGKLTQDQLKKIAETKMPDLNAASLESAMRMIAGTARSMGVTIE 140
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_THETN (50S ribosomal protein L11 OS=Thermoanaerobacter tengcongensis GN=rplK PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.511e-43 Identity = 89/125 (71.20%), Postives = 102/125 (81.60%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 AGKATPAPPVG ALG GVNIMAFCK++N RTA AG +IPV IT+Y DRSF+FI KTPPASVLL KAAG+E GS P +QKVGKIT +QLR IA K+ DLN T IE+AMR+IAGTA +MGI+I Sbjct: 15 AGKATPAPPVGTALGPHGVNIMAFCKEFNERTAKDAGLIIPVVITIYSDRSFSFITKTPPASVLLKKAAGIESGSPQPNKQKVGKITKQQLREIAEIKMRDLNTTDIEAAMRMIAGTARSMGIEI 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_THENN (50S ribosomal protein L11 OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=rplK PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.973e-43 Identity = 84/125 (67.20%), Postives = 103/125 (82.40%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 AGKATPAPPVGPALG GVNIM FCK +NA TADKAG ++PV ITVY+D+SFTFI+KTPPAS LL KAAG+E GS +PK++ VGK+T +Q+ IA K+PDLN +E+AMRII GTA +MGI++ Sbjct: 15 AGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKAGMILPVVITVYEDKSFTFIIKTPPASFLLKKAAGIESGSSEPKRKIVGKVTRKQIEEIAKIKMPDLNANDLEAAMRIIEGTARSMGIEV 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_CLONN (50S ribosomal protein L11 OS=Clostridium novyi (strain NT) GN=rplK PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.577e-43 Identity = 86/126 (68.25%), Postives = 105/126 (83.33%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 660 AGKATPAPPVGPALG GVNIMAFCK+YNA+TA++AG IPV I+VY DRSF+FILKTPPA+VL+ KAAG++ GS +P + KVGKIT QL+ IA K+PDLN S+ESAM +IAGTA +MGI ++ Sbjct: 15 AGKATPAPPVGPALGQHGVNIMAFCKEYNAKTANQAGMTIPVIISVYQDRSFSFILKTPPAAVLIKKAAGLDSGSGEPNKTKVGKITKAQLKEIAETKMPDLNAGSVESAMSMIAGTARSMGITVE 140
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RK11_ODOSI (50S ribosomal protein L11, chloroplastic OS=Odontella sinensis GN=rpl11 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.577e-43 Identity = 87/125 (69.60%), Postives = 99/125 (79.20%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 AGKATPAPPVGPALG GVNI AFCK+YNA+T DK G +IPVEI+VY+DRS+TFILKTPPASVLL AA ++KGS P + VG IT QL IA+ KLPDLN T I SAM+I+ GTA NMGI I Sbjct: 15 AGKATPAPPVGPALGQHGVNIAAFCKEYNAKTTDKTGLIIPVEISVYEDRSYTFILKTPPASVLLANAAKIKKGSSTPNRVNVGSITKSQLEEIASIKLPDLNTTKISSAMKIVEGTARNMGISI 139 The following BLAST results are available for this feature:
BLAST of DR403905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403905 ID=DR403905; Name=DR403905; organism=Citrus sinensis; type=EST; length=766bpback to top |