DR403905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_BACA2 (50S ribosomal protein L11 OS=Bacillus amyloliquefaciens (strain FZB42) GN=rplK PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.860e-42 Identity = 81/126 (64.29%), Postives = 102/126 (80.95%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 660 AGKA PAPPVGPALG GVNIM FCK++NARTAD+AG +IPVEI+VY+DRSFTFI KTPPA+VLL KAAG+E GS +P + KV + +++R IA K+PDLN +E+AMR++ GTA +MGI I+ Sbjct: 15 AGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEISVYEDRSFTFITKTPPAAVLLKKAAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAADVEAAMRMVEGTARSMGIVIE 140
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_THERP (50S ribosomal protein L11 OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=rplK PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 6.347e-42 Identity = 81/125 (64.80%), Postives = 103/125 (82.40%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 AGKATPAPPVGPALG GV IM F K+YN +TA AG +IPV +T+Y+DRSFTF+LKTPPA+ LL +AAG+EKG+ DPK+QKVG++T EQ+R IA K+PDLN +E+AMR+I GTA +MGI++ Sbjct: 15 AGKATPAPPVGPALGQHGVPIMNFVKEYNEKTAHLAGQIIPVVVTIYEDRSFTFVLKTPPAADLLRRAAGIEKGAADPKRQKVGRVTREQIREIAQLKMPDLNARDLEAAMRMIEGTARSMGIEV 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_THELT (50S ribosomal protein L11 OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=rplK PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 6.347e-42 Identity = 80/125 (64.00%), Postives = 104/125 (83.20%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 AGKATPAPPVGPALG +GVNIM FCK +NA TADKAG ++PV ITVY+DRSF+F++KTPPAS LL +AAG+EKGS +PK++ VGK+T +QL IA K+PD+ +E+A++I+ GTA +MGI+I Sbjct: 15 AGKATPAPPVGPALGQRGVNIMEFCKRFNAETADKAGMILPVIITVYEDRSFSFVVKTPPASFLLKRAAGLEKGSGEPKRKNVGKVTRKQLEEIAKIKMPDITANDLEAAVKIVEGTAKSMGIEI 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11A_BACCR (50S ribosomal protein L11-1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rplK1 PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 6.347e-42 Identity = 81/126 (64.29%), Postives = 102/126 (80.95%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 660 AGKA PAPPVGPALG GVNIM FCK++NARTAD+AG +IPVEITV++DRSFTFI KTPPA+VLL KAAG+E GS +P + KV + +++R IA K+PDLN S+E+AMR++ G A +MGI I+ Sbjct: 15 AGKANPAPPVGPALGQAGVNIMGFCKEFNARTADQAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKAAGIESGSGEPNRNKVATVKRDKVREIAETKMPDLNAASVEAAMRMVEGAARSMGIVIE 140
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_THEM4 (50S ribosomal protein L11 OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=rplK PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 8.289e-42 Identity = 84/126 (66.67%), Postives = 102/126 (80.95%), Query Frame = 1 Query: 280 EAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 657 EAGKATPAPPVGPALG +GVN+M FCK +NA TADKAG +IPV ITVY+DRSFTFI KTPPAS LL KAA + GS++PK++ VGK+T EQ++ IA K DLN IE+AM+II GTA +MGI++ Sbjct: 14 EAGKATPAPPVGPALGQRGVNLMEFCKKFNAATADKAGMIIPVIITVYEDRSFTFITKTPPASFLLKKAAKLNSGSQEPKRKIVGKVTREQIKEIAEIKKEDLNANDIEAAMKIIEGTAKSMGIEV 139
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_STRVN (50S ribosomal protein L11 OS=Streptomyces violaceoruber GN=rplK PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 8.289e-42 Identity = 82/127 (64.57%), Postives = 101/127 (79.53%), Query Frame = 1 Query: 280 EAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 660 +AG A PAPPVGPALG GVNIM FCK YNA T + G+VIPVEITVY+DRSFTFI KTPPA+ ++LKAAGVEKGS +P + KV KIT +Q+R IAT K+PDLN ++ A +IIAGTA +MG+ ++ Sbjct: 17 QAGAANPAPPVGPALGQHGVNIMEFCKAYNAATESQRGWVIPVEITVYEDRSFTFITKTPPAAKMILKAAGVEKGSGEPHKTKVAKITRDQVREIATTKMPDLNANDLDQAEKIIAGTARSMGVTVE 143
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_STRLI (50S ribosomal protein L11 OS=Streptomyces lividans GN=rplK PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 8.289e-42 Identity = 82/127 (64.57%), Postives = 101/127 (79.53%), Query Frame = 1 Query: 280 EAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 660 +AG A PAPPVGPALG GVNIM FCK YNA T + G+VIPVEITVY+DRSFTFI KTPPA+ ++LKAAGVEKGS +P + KV KIT +Q+R IAT K+PDLN ++ A +IIAGTA +MG+ ++ Sbjct: 17 QAGAANPAPPVGPALGQHGVNIMEFCKAYNAATESQRGWVIPVEITVYEDRSFTFITKTPPAAKMILKAAGVEKGSGEPHKTKVAKITRDQVREIATTKMPDLNANDLDQAEKIIAGTARSMGVTVE 143
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_STRCO (50S ribosomal protein L11 OS=Streptomyces coelicolor GN=rplK PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 8.289e-42 Identity = 82/127 (64.57%), Postives = 101/127 (79.53%), Query Frame = 1 Query: 280 EAGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 660 +AG A PAPPVGPALG GVNIM FCK YNA T + G+VIPVEITVY+DRSFTFI KTPPA+ ++LKAAGVEKGS +P + KV KIT +Q+R IAT K+PDLN ++ A +IIAGTA +MG+ ++ Sbjct: 17 QAGAANPAPPVGPALGQHGVNIMEFCKAYNAATESQRGWVIPVEITVYEDRSFTFITKTPPAAKMILKAAGVEKGSGEPHKTKVAKITRDQVREIATTKMPDLNANDLDQAEKIIAGTARSMGVTVE 143
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_STAAW (50S ribosomal protein L11 OS=Staphylococcus aureus (strain MW2) GN=rplK PE=3 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 8.289e-42 Identity = 83/126 (65.87%), Postives = 100/126 (79.37%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 660 AGKA PAPPVGPALG GVNIM FCK++NART D+AG +IPVEI+VY+DRSFTFI KTPPA VLL KAAG+EKGS +P + KV +T +Q+R IA K+ DLN E+AMRII GTA +MGI ++ Sbjct: 15 AGKANPAPPVGPALGQAGVNIMGFCKEFNARTQDQAGLIIPVEISVYEDRSFTFITKTPPAPVLLKKAAGIEKGSGEPNKTKVATVTKDQVREIANSKMQDLNAADEEAAMRIIEGTARSMGIVVE 140
BLAST of DR403905 vs. ExPASy Swiss-Prot
Match: RL11_STAAT (50S ribosomal protein L11 OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=rplK PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 8.289e-42 Identity = 83/126 (65.87%), Postives = 100/126 (79.37%), Query Frame = 1 Query: 283 AGKATPAPPVGPALGAKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 660 AGKA PAPPVGPALG GVNIM FCK++NART D+AG +IPVEI+VY+DRSFTFI KTPPA VLL KAAG+EKGS +P + KV +T +Q+R IA K+ DLN E+AMRII GTA +MGI ++ Sbjct: 15 AGKANPAPPVGPALGQAGVNIMGFCKEFNARTQDQAGLIIPVEISVYEDRSFTFITKTPPAPVLLKKAAGIEKGSGEPNKTKVATVTKDQVREIANSKMQDLNAADEEAAMRIIEGTARSMGIVVE 140 The following BLAST results are available for this feature:
BLAST of DR403905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403905 ID=DR403905; Name=DR403905; organism=Citrus sinensis; type=EST; length=766bpback to top |