DR403892

Overview
NameDR403892
Unique NameDR403892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length515
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3P2_CANGA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Candida glabrata GN=GPD2 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 7.778e-32
Identity = 69/143 (48.25%), Postives = 87/143 (60.84%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 515
            V+I INGFGRIGRLV RV L R ++E+VAVNDPFI TDY  YMFKYDS HG++        DDK ++   K + V   R+P  +PW     +  ++STGVF                V+I+APS  APMFVVGVNE +Y  +L
Sbjct:    2 VRIAINGFGRIGRLVLRVALSRSNIEVVAVNDPFITTDYAAYMFKYDSTHGRYAGE--VTHDDKHIIIDGKKIAVHQERDPANLPWGSENIDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKYTSDL 142          
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3P_ZYGRO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosaccharomyces rouxii PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.263e-31
Identity = 65/142 (45.77%), Postives = 89/142 (62.68%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 512
            V + +NGFGRIGRLV R+ + R D+ LVA+NDPFI TDY  YMFKYDS HG++   E+    D  +L G+K V VF  ++P  +PW + G +  ++STG+F                V+I+APS  APM+V+GVNE  Y P+
Sbjct:    2 VNVSVNGFGRIGRLVTRIAISRKDINLVAINDPFISTDYAAYMFKYDSTHGRF-DGEVSHDKDHIILNGKK-VAVFNEKDPAALPWGKLGVDVAIDSTGIFKEMDSANKHIEAGAKKVVITAPSGSAPMYVMGVNEETYTPD 141          
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3P2_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces lactis GN=GAP2 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.263e-31
Identity = 68/142 (47.89%), Postives = 87/142 (61.27%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 512
            V++ INGFGRIGRLV R+ L R +VE+VA+NDPFI  DY  YMFKYDS HG++        D+ +L+   K V VF  R+P  +PW E   +  ++STGVF                V+I+APS  APMFVVGVNE +Y  E
Sbjct:    2 VRVAINGFGRIGRLVLRIALSRPNVEVVAINDPFISVDYAAYMFKYDSTHGRFAGE--VSHDENSLIIDGKKVLVFQERDPATLPWGEHNVDIAIDSTGVFKELDSAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKYNGE 141          
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3P1_DROME (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Drosophila melanogaster GN=Gapdh1 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 2.263e-31
Identity = 73/142 (51.41%), Postives = 88/142 (61.97%), Query Frame = 3
Query:   90 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 515
            KIGINGFGRIGRLV R  + +    +VAVNDPFI  +YM Y+FK+DS HG++K       +   L+   + +TVF  R+P  I WA  GAEYVVESTGVFT               VIISAPS DAPMFV GVN   Y P++
Sbjct:    3 KIGINGFGRIGRLVLRAAIDKG-ASVVAVNDPFIDVNYMVYLFKFDSTHGRFKG--TVAAEGGFLVVNGQKITVFSERDPANINWASAGAEYVVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFVCGVNLDAYSPDM 141          
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3P_DROHY (Glyceraldehyde-3-phosphate dehydrogenase OS=Drosophila hydei GN=Gapdh1 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.956e-31
Identity = 73/142 (51.41%), Postives = 91/142 (64.08%), Query Frame = 3
Query:   90 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 515
            KIGINGFGRIGRLV R  + +    +VAVNDPFI  +YM Y+FK+DS HG++K   +  +    ++ G+K +TVF  R+P  I WA  GAEYVVESTGVFT               V+ISAPS DAPMFV GVN   Y P++
Sbjct:    3 KIGINGFGRIGRLVLRAAVDKG-ASVVAVNDPFIDVNYMVYLFKFDSTHGRFKG-TVSAEGGFLVVNGQK-ITVFSERDPANINWASAGAEYVVESTGVFTTTEKASTHLKGGAKKVVISAPSADAPMFVCGVNLDAYSPDM 141          
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3PT_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Homo sapiens GN=GAPDHS PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 3.860e-31
Identity = 69/156 (44.23%), Postives = 100/156 (64.10%), Query Frame = 3
Query:   42 HSFTAQFHLSRIMGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 509
            H  T    +  +  ++ +GINGFGRIGRLV R  +++  V++VAVNDPFI  +YM YMFKYDS HG++K   ++ ++ + L+     ++V+  + P++IPW   G+ YVVESTGV+                V+ISAPS DAPMFV+GVNE++Y P
Sbjct:   61 HPATPPPKMVSVARELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYK-GSVEFRNGQ-LVVDNHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNP 213          
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3P1_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Agaricus bisporus GN=gpd1 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 5.041e-31
Identity = 68/142 (47.89%), Postives = 90/142 (63.38%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 512
            V +GINGFGRIGRLV R  LQ   + +VAVNDPF+  +YM Y+FKYDSVHG+++  +++ KD K ++ G K +  F  R P  I WA+ GAEY+VESTGVF                V+I+AP    P +VVGVN  +Y P+
Sbjct:    2 VNVGINGFGRIGRLVLRNALQMQILTVVAVNDPFLDVEYMAYLFKYDSVHGRYQ-GKVETKDGKLIIDGHK-IAAFAEREPANIKWADCGAEYIVESTGVFKTEELAKEHLKGGAKKVVITAPGSGVPTYVVGVNLDKYDPK 141          
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3PT_BOVIN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Bos taurus GN=GAPDHS PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 6.584e-31
Identity = 68/139 (48.92%), Postives = 89/139 (64.03%), Query Frame = 3
Query:   93 IGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 509
            +GINGFGRIGRLV R  +++  V++VAVNDPFI  +YM YMFKYDS HG++K +    K    L+     ++VF  + P+EIPW   G+ +VVE+TGV+                V+I APS DAPMFV+GVNE EY P
Sbjct:   65 VGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDLEYMVYMFKYDSTHGRYKGNVEHKKGQ--LVVDNNEISVFQCKQPKEIPWKSVGSPFVVEATGVYLSLEETKAHIEAGAQRVVICAPSPDAPMFVMGVNEKEYNP 200          
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3P2_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Saccharomyces cerevisiae GN=TDH2 PE=1 SV=3)

HSP 1 Score: 133.265 bits (334), Expect = 6.584e-31
Identity = 66/143 (46.15%), Postives = 87/143 (60.84%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 515
            V++ INGFGRIGRLV R+ LQR +VE+VA+NDPFI  DY  YMFKYDS HG++        DDK ++     +  F  R+P  +PWA    +  ++STGVF                V+I+APS  APMFV+GVNE +Y  +L
Sbjct:    2 VRVAINGFGRIGRLVMRIALQRKNVEVVALNDPFISNDYSAYMFKYDSTHGRYAGE--VSHDDKHIIVDGHKIATFQERDPANLPWASLNIDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYTSDL 142          
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3P_SCHMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 8.599e-31
Identity = 74/147 (50.34%), Postives = 94/147 (63.95%), Query Frame = 3
Query:   78 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF-TXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 515
            M + K+GINGFGRIGRLV R    ++ V++V+VNDPFI  +YM YM K DS HG +   E+  ++ K  + G K ++V   R+P  IPW + GAEYVVESTGVF T               VIISAPS DAPMFVVGVNE+ Y+  +
Sbjct:    1 MSRAKVGINGFGRIGRLVLRAAFLKNTVDVVSVNDPFIDLEYMVYMIKRDSTHGTFP-GEVSTENGKLKVNG-KLISVHCERDPANIPWDKDGAEYVVESTGVFTTIDKAQAHIKNNRAKKVIISAPSADAPMFVVGVNENSYEKSM 145          
The following BLAST results are available for this feature:
BLAST of DR403892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 313
Match NameE-valueIdentityDescription
G3P2_CANGA7.778e-3248.25Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Cand... [more]
G3P_ZYGRO2.263e-3145.77Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosa... [more]
G3P2_KLULA2.263e-3147.89Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P1_DROME2.263e-3151.41Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Dros... [more]
G3P_DROHY2.956e-3151.41Glyceraldehyde-3-phosphate dehydrogenase OS=Drosop... [more]
G3PT_HUMAN3.860e-3144.23Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3P1_AGABI5.041e-3147.89Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Agar... [more]
G3PT_BOVIN6.584e-3148.92Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3P2_YEAST6.584e-3146.15Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Sacc... [more]
G3P_SCHMA8.599e-3150.34Glyceraldehyde-3-phosphate dehydrogenase OS=Schist... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246J13 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246J13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403892 ID=DR403892; Name=DR403892; organism=Citrus sinensis; type=EST; length=515bp
GGGACCACGACTGCTCTCTCTTTCTCTACAACTTTCTTCACCACTCTTTC
ACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGAAT
CAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCAGA
GGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCAAAACCGAT
TACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAGCA
CCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAAGC
CTGTCACCGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTGAG
ACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACAGACAAGGA
TAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTCAG
CCCCCAGCAAGGATGCTCCTATGTTTGTTGTGGGTGTCAATGAGCACGAG
TACAAACCAGAGCTC
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