DR403892

Overview
NameDR403892
Unique NameDR403892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length515
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3P1_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Rhizomucor racemosus GN=GPD1 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.124e-33
Identity = 74/142 (52.11%), Postives = 90/142 (63.38%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 512
            V++GINGFGRIGR+V R      DV++VA+NDPFI  DYM YM KYD+VHG++    ++ KD K ++ G   + V   R+P  IPW   GA+YVVESTGVFT               VIISAPS DAPMFV GVN   YK E
Sbjct:    3 VQVGINGFGRIGRIVLRATESNKDVQVVAINDPFIPLDYMVYMLKYDTVHGRF-DGSVEAKDGKLVVNGH-AIAVSAERDPTSIPWGSAGADYVVESTGVFTTTEAASAHLKGGAKKVIISAPSADAPMFVCGVNLEAYKSE 142          
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3P_SORMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Sordaria macrospora GN=GPD PE=3 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 5.386e-33
Identity = 71/139 (51.08%), Postives = 93/139 (66.91%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEY 503
            VK+GINGFGRIGR+V R  ++ DD+++VAVNDPFI+  Y  YM +YDS HG +K   + V+    ++ G+K V  +  R+P  IPW+ETGA+Y+VESTGVFT               VIISAPS DAPM+V+GVN   Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHDDIQIVAVNDPFIEPKYAEYMLRYDSTHGNFK-GTIAVEGSDLVVNGKK-VKFYTERDPSAIPWSETGADYIVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMYVMGVNNESY 139          
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3P_RHIMI (Glyceraldehyde-3-phosphate dehydrogenase OS=Rhizomucor miehei GN=GPD PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 5.386e-33
Identity = 77/143 (53.85%), Postives = 95/143 (66.43%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 515
            VK GINGFGRIGR+V R  L   +VE+VA+NDPFI  +YM YMFKYDS HG++K   ++ KD K ++ G KP++V+  R+P  IP    GAEY+VESTGVFT               VIISAPS DAPMFVVGVN   Y  ++
Sbjct:    3 VKAGINGFGRIGRIVLRASLLNPEVEVVAINDPFIDLEYMVYMFKYDSTHGRFK-GTVEAKDGKLVVNG-KPISVYAERDPCCIP-GRIGAEYIVESTGVFTTKEKAGAHLTGGAKKVIISAPSADAPMFVVGVNLESYSSDM 142          
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3P_COLGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum gloeosporioides GN=GPDA PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 7.035e-33
Identity = 74/142 (52.11%), Postives = 93/142 (65.49%), Query Frame = 3
Query:   78 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEY 503
            M  +K+GINGFGRIGR+V R  ++  +VE+VAVNDPFI+T Y  YM KYDS HG + + E+K ++   L+   K V  +  R+P  IPW ETGA+YVVESTGVFT               VIISAPS DAPM+V+ VNE  Y
Sbjct:    1 MAPIKVGINGFGRIGRIVFRNAIEHPEVEIVAVNDPFIETKYAAYMLKYDSTHGIF-NGEIK-QEGNDLVINGKTVKFYTERDPAAIPWKETGADYVVESTGVFTTTDKAKAHLQGGAKKVIISAPSADAPMYVMVVNEKSY 140          
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3P_PODAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Podospora anserina GN=GPD PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 9.188e-33
Identity = 74/139 (53.24%), Postives = 91/139 (65.47%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEY 503
            VK+GINGFGRIGR+V R  ++  DVE+VAVNDPFI+  Y  YM KYDS HG +K   ++V     ++ G K V  +  R+P  IPW +TGAEY+VESTGVFT               VIISAPS DAPM+V+GVNE  Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHPDVEIVAVNDPFIEPKYAEYMLKYDSTHGVFK-GTIQVSGSDLIVNG-KTVKFYTERDPSAIPWKDTGAEYIVESTGVFTTTEKASAHLKGGAKRVIISAPSADAPMYVMGVNEKTY 139          
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3P1_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces lactis GN=GAP1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 9.188e-33
Identity = 71/142 (50.00%), Postives = 92/142 (64.79%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 512
            VK+ INGFGRIGRLV R+ LQR  +E+VAVNDPFI  DY  YMFKYDS HG++K  E+    +  ++ G K + VF  ++P  +PW + G + V++STGVF                V+I+APSK APMFVVGVNE +Y  E
Sbjct:    2 VKVAINGFGRIGRLVLRIALQRKALEVVAVNDPFISVDYAAYMFKYDSTHGRYK-GEVTTSGNDLVIDGHK-IAVFQEKDPANLPWGKLGVDIVIDSTGVFKELDSAQKHLDAGAKKVVITAPSKTAPMFVVGVNEDKYNGE 141          
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3P2_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Schizosaccharomyces pombe GN=gpd3 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.200e-32
Identity = 72/140 (51.43%), Postives = 92/140 (65.71%), Query Frame = 3
Query:   90 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 509
            K+GINGFGRIGR+V R  +    +++VAVNDPFI  DYM YMFKYDS HG+++   ++ K  K ++ G   + V   R+P  I W+ +GAEYV+ESTGVFT               VIISAPSKDAPMFVVGVN  ++ P
Sbjct:    5 KVGINGFGRIGRIVLRNAILTGKIQVVAVNDPFIDLDYMAYMFKYDSTHGRFE-GSVETKGGKLVIDGHS-IDVHNERDPANIKWSASGAEYVIESTGVFTTKETASAHLKGGAKRVIISAPSKDAPMFVVGVNLEKFNP 142          
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3P_NEUCR (Glyceraldehyde 3-phosphate-dehydrogenase OS=Neurospora crassa GN=gpd-1 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 1.567e-32
Identity = 71/139 (51.08%), Postives = 91/139 (65.47%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEY 503
            VK+GINGFGRIGR+V R  ++ DD+ +VAVNDPFI+  Y  YM +YD+ HG +K   ++V D   L+   K V  +  R+P  IPW+ETGA+Y+VESTGVFT               VIISAPS DAPM+V+GVN   Y
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHDDIHIVAVNDPFIEPKYAAYMLRYDTTHGNFK-GTIEV-DGADLVVNGKKVKFYTERDPAAIPWSETGADYIVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMYVMGVNNETY 139          
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3P_ASPNG (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus niger GN=gpdA PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 1.567e-32
Identity = 70/142 (49.30%), Postives = 93/142 (65.49%), Query Frame = 3
Query:   90 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 515
            K+GINGFGRIGR+V R  +   +V++VAVNDPFI+T Y  YM KYDS HGQ+K   ++  ++  ++ G+K +  F  R+P  IPW  TGA+Y+VESTGVFT               V+ISAPS DAPMFV+GVN   Y  ++
Sbjct:    4 KVGINGFGRIGRIVFRNAINHGEVDVVAVNDPFIETHYAAYMLKYDSTHGQFK-GTIETYEEGLIVNGKK-IRFFAERDPAAIPWGTTGADYIVESTGVFTTQEKAAAHLKGGAKKVVISAPSADAPMFVMGVNNTSYTKDI 143          
BLAST of DR403892 vs. ExPASy Swiss-Prot
Match: G3P_TRIAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Trichoderma atroviride GN=gpd1 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.047e-32
Identity = 70/139 (50.36%), Postives = 93/139 (66.91%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIKTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEY 503
            +K+GINGFGRIGR++    L++ ++ +VAVNDPFI+  Y  YM KYDS HG +K  +++V D + L+   KP+  +  R+P  I W+ETGAEY+VESTGVFT               VIISAPS DAPMFV+GVN  +Y
Sbjct:    3 IKVGINGFGRIGRILLSNALEKPELSVVAVNDPFIEPTYAAYMLKYDSSHGLFKG-DIEV-DGQNLVVNGKPIRFYSERDPANIKWSETGAEYIVESTGVFTTIDKAKAHLNGGAKKVIISAPSADAPMFVMGVNHKDY 139          
The following BLAST results are available for this feature:
BLAST of DR403892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 313
Match NameE-valueIdentityDescription
G3P1_RHIRA4.124e-3352.11Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Rhiz... [more]
G3P_SORMA5.386e-3351.08Glyceraldehyde-3-phosphate dehydrogenase OS=Sordar... [more]
G3P_RHIMI5.386e-3353.85Glyceraldehyde-3-phosphate dehydrogenase OS=Rhizom... [more]
G3P_COLGL7.035e-3352.11Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P_PODAN9.188e-3353.24Glyceraldehyde-3-phosphate dehydrogenase OS=Podosp... [more]
G3P1_KLULA9.188e-3350.00Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]
G3P2_SCHPO1.200e-3251.43Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Schi... [more]
G3P_NEUCR1.567e-3251.08Glyceraldehyde 3-phosphate-dehydrogenase OS=Neuros... [more]
G3P_ASPNG1.567e-3249.30Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3P_TRIAT2.047e-3250.36Glyceraldehyde-3-phosphate dehydrogenase OS=Tricho... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246J13 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246J13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403892 ID=DR403892; Name=DR403892; organism=Citrus sinensis; type=EST; length=515bp
GGGACCACGACTGCTCTCTCTTTCTCTACAACTTTCTTCACCACTCTTTC
ACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGAAT
CAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCAGA
GGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCAAAACCGAT
TACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAGCA
CCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAAGC
CTGTCACCGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTGAG
ACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACAGACAAGGA
TAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTCAG
CCCCCAGCAAGGATGCTCCTATGTTTGTTGTGGGTGTCAATGAGCACGAG
TACAAACCAGAGCTC
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