CX069469
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_MESSB (50S ribosomal protein L2 OS=Mesorhizobium sp. (strain BNC1) GN=rplB PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.036e-37 Identity = 77/163 (47.24%), Postives = 107/163 (65.64%), Query Frame = -3 Query: 169 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 657 P++ D+++ VD+ G+ MPLA M +GTI+HN+E+ PG+GG++ R+AG+ A+++ ++RL SG ++L+ C AT+G VSNP H L KAG+ RWLG+RP RGV MNPVDHPHGGGEGR+ GR ++PWGKP K G KT S Sbjct: 107 PQRLAAGDRVISSAQSVDVKP--GNAMPLAAMPVGTIVHNVELKPGKGGQIARSAGSYAQLVGRD-QGMAILRLNSGEQRLVSGTCMATVGAVSNPDHANVSLGKAGRKRWLGKRPHNRGVTMNPVDHPHGGGEGRTSG----GRHPVSPWGKPTK-GRKTRS 261
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_BRASB (50S ribosomal protein L2 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rplB PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.660e-37 Identity = 84/161 (52.17%), Postives = 108/161 (67.08%), Query Frame = -3 Query: 175 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 657 P++ V D I+ +VD+ G+ MPL M +GTI+HNIEV G+GG+L R+AGT A+I+ + +VRL SG ++L+ RCR TIG VSNP H + KAG+ RW+GRRP RGVAMNP+DHPHGGGEGR+ GR +TPWGKP K G KT Sbjct: 107 PQRLAVGDTIVAGN-YVDVKP--GNVMPLGNMPVGTIVHNIEVKIGKGGQLARSAGTYAQIVGRD-QDYVIVRLNSGEQRLVHGRCRGTIGAVSNPDHMNTSIGKAGRKRWMGRRPHNRGVAMNPIDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_BACCQ (50S ribosomal protein L2 OS=Bacillus cereus (strain Q1) GN=rplB PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.474e-37 Identity = 80/152 (52.63%), Postives = 108/152 (71.05%), Query Frame = -3 Query: 175 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKPCKSGYKT 627 M M+ + + +IG+ +PL + +GT++HNIE+ PG+GG+LVR+AGTSA++L + + LVRL SG +L+ + CRA +G V N SH K+ KAG+SRWLG+RP VRG MNPVDHPHGGGEGRS GR S ++PWGKP G+KT Sbjct: 114 MEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGKE-GKYVLVRLTSGEVRLVLSACRAAVGQVGNESHELIKIGKAGRSRWLGKRPTVRGSVMNPVDHPHGGGEGRSPI----GRKSPMSPWGKP-TLGFKT 259
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_BACCN (50S ribosomal protein L2 OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=rplB PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.474e-37 Identity = 80/152 (52.63%), Postives = 108/152 (71.05%), Query Frame = -3 Query: 175 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKPCKSGYKT 627 M M+ + + +IG+ +PL + +GT++HNIE+ PG+GG+LVR+AGTSA++L + + LVRL SG +L+ CRAT+G V N SH K+ KAG+SRWLG+RP VRG MNPVDHPHGGGEGR+ GR S ++PWGKP G+KT Sbjct: 114 MEVMSGPEADIKIGNALPLMNIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGKE-GKYVLVRLTSGEVRLVLATCRATVGQVGNESHELIKIGKAGRSRWLGKRPTVRGSVMNPVDHPHGGGEGRAPI----GRKSPMSPWGKP-TLGFKT 259
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_NEOSM (50S ribosomal protein L2 OS=Neorickettsia sennetsu (strain Miyayama) GN=rplB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.537e-37 Identity = 81/141 (57.45%), Postives = 102/141 (72.34%), Query Frame = -3 Query: 166 GSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTASP 588 G+CMPL + +GT +HN+E+ PG GG+LVR+AG+SA+++ ++ LV LPSG ++LI + C ATIG VSN KL KAG+SRWLGRRP VRGVAMNPVDHP GGGEG K+SG GR ++PWG P K G KT P Sbjct: 132 GACMPLGKVPLGTTVHNVELKPGAGGQLVRSAGSSARVIARD-GNYTLVTLPSGEKRLILSTCHATIGAVSNADRKNTKLGKAGRSRWLGRRPSVRGVAMNPVDHPMGGGEG--KTSG--GRHPVSPWGFPTK-GKKTRDP 266
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_DICT6 (50S ribosomal protein L2 OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=rplB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.537e-37 Identity = 83/148 (56.08%), Postives = 104/148 (70.27%), Query Frame = -3 Query: 175 MAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 618 M+ +++ +IG+ +PL + GT+IHN+E+ PG+GG+LVRAAGT+A+IL + + VRLPSG +L D CRATIG VSN H L KAG+SRWLGRRP VRG AMNPVDHPHGGGEG++ LTPWGKP GYKT Sbjct: 117 MSGENVDIKIGNNLPLKNIPDGTLIHNLELYPGRGGQLVRAAGTAAQILGKE-GKWAYVRLPSGEIRLFDLNCRATIGQVSNVDHQNVSLGKAGRSRWLGRRPHVRGSAMNPVDHPHGGGEGKAPIG---HPSPLTPWGKP-TLGYKT 259
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_BRAJA (50S ribosomal protein L2 OS=Bradyrhizobium japonicum GN=rplB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.537e-37 Identity = 82/163 (50.31%), Postives = 110/163 (67.48%), Query Frame = -3 Query: 169 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 657 P++ V D ++ +VD+ G+ MPL M +GTIIHNIEV G+GG+L R+AGT A+++ + ++RL SG ++L+ RCR TIG VSNP H + KAG++RWLGR+P RGV+MNP+DHPHGGGEGR+ GR +TPWGKP K G KT S Sbjct: 107 PQRLAVGDSVVAGN-YVDVKP--GNVMPLGNMPVGTIIHNIEVKIGKGGQLARSAGTYAQLVGRD-QDYVIIRLNSGEQRLVHGRCRGTIGAVSNPDHMNTSIGKAGRNRWLGRKPHNRGVSMNPIDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKTRS 260
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_THETN (50S ribosomal protein L2 OS=Thermoanaerobacter tengcongensis GN=rplB PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.925e-37 Identity = 78/144 (54.17%), Postives = 106/144 (73.61%), Query Frame = -3 Query: 175 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 606 +++ ++G+ +PL + +GTI+HNIE+ PG+GG+LVRAAG +A+++ + + +R+PSG +LI+ CRATIG VSN H K+ KAG+SRWLG RP VRG AMNPVDHPHGGGEG++ G+ G LTPWGKP GYKT Sbjct: 121 NVDIKVGNALPLRNIPVGTIVHNIELIPGKGGQLVRAAGAAAQLMAKE-GDYVHIRMPSGEIRLINANCRATIGQVSNIDHENVKIGKAGRSRWLGIRPTVRGSAMNPVDHPHGGGEGKA-PIGHPG--PLTPWGKPA-LGYKT 259
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_RHOPB (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplB PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.925e-37 Identity = 83/163 (50.92%), Postives = 110/163 (67.48%), Query Frame = -3 Query: 169 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 657 P++ V D ++ A+VD+ G+ MPL M IGTI+HN+E+ G+GG++ R+AGT A+++ + +VRL SG ++L+ RC ATIG VSNP H + KAG+SRWLGR+P RGV MNPVDHPHGGGEGR+ GR +TPWGKP K G KT S Sbjct: 107 PQRLAVGDTVLAG-AYVDVKP--GNVMPLGNMPIGTIVHNVELKIGKGGQIARSAGTYAQLVGRD-HDYVIVRLNSGEQRLVHGRCTATIGAVSNPDHMNISIGKAGRSRWLGRKPHNRGVTMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKTRS 260
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_MAGSM (50S ribosomal protein L2 OS=Magnetococcus sp. (strain MC-1) GN=rplB PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.925e-37 Identity = 77/171 (45.03%), Postives = 112/171 (65.50%), Query Frame = -3 Query: 169 GDPSKQEKPKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 681 G+ S P++ V D ++ +++ + G+CMPL M IGTIIHN+E+ PG+GG++ R+AG +++ + + +++PSG +L+ C AT+G VSNP + K+ KAG++RW+G+RP VRGV MNPVDHPHGGGEGR+ GR +TPWG P K G KT S Sbjct: 99 GEKSYILAPQRLQVGDTVVSAKTLDNVDVKPGNCMPLRVMPIGTIIHNVELKPGKGGQVARSAGNYIQLMGKE-GKYAQLKMPSGEMRLVLLECMATVGMVSNPDNSNTKIGKAGRTRWMGKRPSVRGVVMNPVDHPHGGGEGRTSG----GRHPVTPWGVPTK-GKKTRS 263 The following BLAST results are available for this feature:
BLAST of CX069469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069469 ID=CX069469; Name=CX069469; organism=Citrus sinensis; type=EST; length=887bpback to top |