CX069469
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_BART1 (50S ribosomal protein L2 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=rplB PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.016e-36 Identity = 78/163 (47.85%), Postives = 110/163 (67.48%), Query Frame = -3 Query: 169 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 657 P++ V D ++ A +++ + G+ MPL M +GTIIHN+E+ PG+GG++ R+AG A+++ ++RL SG ++L+ + C AT+G VSNP HG KAG+SRW G+RP VRGVAMNPVDHPHGGGEGR+ GR ++PWGKP K G +T S Sbjct: 107 PQRLGVGDSVV---AGSNVDVKPGNAMPLGNMPVGTIIHNVEMKPGKGGQIARSAGAYAQLVGRD-HGMAILRLNSGEQRLVSSSCFATVGAVSNPDHGNINDGKAGRSRWRGKRPHVRGVAMNPVDHPHGGGEGRTSG----GRHPVSPWGKPTK-GKRTRS 260
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_RICM5 (50S ribosomal protein L2 OS=Rickettsia massiliae (strain Mtu5) GN=rplB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.551e-36 Identity = 79/161 (49.07%), Postives = 112/161 (69.57%), Query Frame = -3 Query: 175 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 657 P+K +V ++++ D + +IG+C+PL C+ IGT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C+ATIG++SNP L KAG++RWLG RP VRGVAMNPVDHPHGGGEG K+SG GR +TPWG P K G KT Sbjct: 107 PQKLSVGNRVISSQ---DADIKIGNCLPLKCIPIGTTLHNVEMQVGKGGQIARSAGTSVDLVGKD-SGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGWRPHVRGVAMNPVDHPHGGGEG--KTSG--GRHPVTPWGFPTK-GKKT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_RHOP5 (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain BisA53) GN=rplB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.551e-36 Identity = 82/163 (50.31%), Postives = 109/163 (66.87%), Query Frame = -3 Query: 169 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 657 P++ V D ++ A+VD+ G+ MPL M IGTI+HN+E+ G+GG++ R+AGT A+++ + +VRL SG ++LI RC ATIG VSNP H + KAG++RWLG RP RGV MNP+DHPHGGGEGR+ GR +TPWGKP K G KT S Sbjct: 107 PQRLAVGDTVIAG-AYVDVKP--GNVMPLGNMPIGTIVHNVEMKIGKGGQIARSAGTYAQLVGRD-HDYVIVRLNSGEQRLIHGRCTATIGAVSNPDHMNISIGKAGRTRWLGWRPHNRGVVMNPIDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKTRS 260
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_RHISN (50S ribosomal protein L2 OS=Rhizobium sp. (strain NGR234) GN=rplB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.551e-36 Identity = 78/163 (47.85%), Postives = 107/163 (65.64%), Query Frame = -3 Query: 169 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 657 P++ DK++ VD+ G+ MPL + +G+IIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A+IG VSNP HG KAG+SRW G+RP VRGV MNPVDHPHGGGEGR+ GR +TPWGKP K G +T S Sbjct: 107 PQRLAAGDKVIASDKAVDVKP--GNTMPLQFIPVGSIIHNVEMKPGKGGQIARSAGTYAQLVGRD-QGMAILRLNSGEQRLVHGSCLASIGAVSNPDHGNINDGKAGRSRWRGKRPHVRGVVMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKRTRS 261
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_GLUDA (50S ribosomal protein L2 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rplB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.551e-36 Identity = 78/147 (53.06%), Postives = 102/147 (69.39%), Query Frame = -3 Query: 175 AHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 615 A VDI G+ MPL+ + +GTI+HNIE+ G GGK+ R+AGT A+++ + S + ++L SG +++ C ATIG VSNP + + + KAG+SRWLGRRP RGV MNPVDHPHGGGEGR+ GR +TPWGKP K GYKT Sbjct: 120 ARVDIKP--GNAMPLSAIPVGTIVHNIELKQGAGGKMARSAGTYAQLVGKD-SGYAQIKLQSGELRVVRGECMATIGAVSNPDNMNQHMGKAGRSRWLGRRPHNRGVVMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GYKT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_BRUO2 (50S ribosomal protein L2 OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=rplB PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.551e-36 Identity = 79/163 (48.47%), Postives = 110/163 (67.48%), Query Frame = -3 Query: 169 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 657 P++ V D+++ A ++ + G+ MPL+ M +GTIIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+S W G+RP VRGVAMNPVDHPHGGGEGR+ GR +TPWGKP K G KT S Sbjct: 107 PQRLAVGDQVV---AGNFVDVKPGNAMPLSSMPVGTIIHNVELKPGKGGQIARSAGTYAQLVGRD-QGMAILRLNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSVWRGKRPHVRGVAMNPVDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKTRS 260
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_SULSY (50S ribosomal protein L2 OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=rplB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.556e-36 Identity = 77/148 (52.03%), Postives = 100/148 (67.57%), Query Frame = -3 Query: 175 MAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 618 MA D ++G+ +PL + +GT++HNIE+ PG+GG+LVRAAG SA+IL + +RLPSG +L+ +C ATIG V H +L KAG+SRWLG RP VRG AMNP DHPHGGGEGR+ G+ ++PWG P K GYKT Sbjct: 117 MAGPDAEIKVGNALPLENIPVGTLVHNIELTPGKGGQLVRAAGMSAQILGRE-GDYVQIRLPSGELRLVYKKCMATIGAVGLAEHELLELGKAGRSRWLGIRPTVRGTAMNPADHPHGGGEGRT-----FGKHPVSPWGLPTK-GYKT 257
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_RICCK (50S ribosomal protein L2 OS=Rickettsia canadensis (strain McKiel) GN=rplB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.556e-36 Identity = 81/161 (50.31%), Postives = 111/161 (68.94%), Query Frame = -3 Query: 175 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 657 P+K +V DK++ D + +IG+C+PL + IGT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +LI C+ATIG++SNP L KAG++RWLG RP VRGVAMNPVDHPHGGGEG K+SG GR +TPWG P K G KT Sbjct: 107 PQKLSVGDKVISSQ---DADIKIGNCLPLKFIPIGTTVHNVEMKVGKGGQIARSAGTSVDLVGKD-SGYAQIKLRSGEFRLIPLDCKATIGSISNPDQKNINLGKAGRNRWLGWRPHVRGVAMNPVDHPHGGGEG--KTSG--GRHPVTPWGFPTK-GKKT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_RICBR (50S ribosomal protein L2 OS=Rickettsia bellii (strain RML369-C) GN=rplB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.556e-36 Identity = 83/161 (51.55%), Postives = 109/161 (67.70%), Query Frame = -3 Query: 175 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 657 P+K V DKI+ D + +IG+C+PL + IGT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C ATIGTVSNP L KAG++RWLG RP VRGVAMNPVDHPHGGGEG K+SG GR +TPWG P K G KT Sbjct: 107 PQKLVVGDKIISSK---DADIKIGNCLPLRYIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGKD-SGYAQIKLKSGEFRLVPLDCMATIGTVSNPDQKNINLGKAGRNRWLGWRPHVRGVAMNPVDHPHGGGEG--KTSG--GRHPVTPWGFPTK-GKKT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_RICB8 (50S ribosomal protein L2 OS=Rickettsia bellii (strain OSU 85-389) GN=rplB PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.556e-36 Identity = 83/161 (51.55%), Postives = 109/161 (67.70%), Query Frame = -3 Query: 175 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 657 P+K V DKI+ D + +IG+C+PL + IGT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C ATIGTVSNP L KAG++RWLG RP VRGVAMNPVDHPHGGGEG K+SG GR +TPWG P K G KT Sbjct: 107 PQKLVVGDKIISSK---DADIKIGNCLPLRYIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGKD-SGYAQIKLKSGEFRLVPLDCMATIGTVSNPDQKNINLGKAGRNRWLGWRPHVRGVAMNPVDHPHGGGEG--KTSG--GRHPVTPWGFPTK-GKKT 258 The following BLAST results are available for this feature:
BLAST of CX069469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069469 ID=CX069469; Name=CX069469; organism=Citrus sinensis; type=EST; length=887bpback to top |