CX069469
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_ACICJ (50S ribosomal protein L2 OS=Acidiphilium cryptum (strain JF-5) GN=rplB PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.117e-35 Identity = 81/161 (50.31%), Postives = 109/161 (67.70%), Query Frame = -3 Query: 175 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 657 P++ V D+++ A V ++ + G+ MPL+ + +GTI+HNIE+ G GGKL R+AGT A+++ + + V+L SG +LI C A+IG VSNP H ++L KAG+ RWLGRRP RGVAMNPVDHP GGGEGR+ GR +TPWGKP K G KT Sbjct: 107 PQRLKVGDQVV---AGVKVDVKPGNAMPLSAIPVGTIVHNIELKAGAGGKLARSAGTFAQLVGKD-QGYAQVKLMSGELRLIRGECMASIGAVSNPDHSNQQLGKAGRKRWLGRRPHNRGVAMNPVDHPLGGGEGRTSG----GRNPVTPWGKPTK-GAKT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_RICAH (50S ribosomal protein L2 OS=Rickettsia akari (strain Hartford) GN=rplB PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.459e-35 Identity = 79/161 (49.07%), Postives = 111/161 (68.94%), Query Frame = -3 Query: 175 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 657 P+K +V D++M D + +IG+C+PL + +GT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C+ATIG++SNP L KAG++RWLG RP VRGVAMNPVDHPHGGGEG K+SG GR +TPWG P K G KT Sbjct: 107 PQKLSVGDRVMSSQ---DADIKIGNCLPLKFIPVGTTLHNVEMKVGKGGQIARSAGTSVDLVGKD-SGYAQIKLRSGEFRLVPLDCKATIGSISNPDRKNINLGKAGRNRWLGWRPHVRGVAMNPVDHPHGGGEG--KTSG--GRHPVTPWGFPTK-GKKT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_ORITI (50S ribosomal protein L2 OS=Orientia tsutsugamushi (strain Ikeda) GN=rplB PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.459e-35 Identity = 84/161 (52.17%), Postives = 108/161 (67.08%), Query Frame = -3 Query: 175 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 657 P+ V DKI+ +IN +G+C+PL + +GTIIHNIE+ PG+GG++ R+AGT A +L + S + ++ SG + I RAT+G+VSN H KAG+ RWLGRRPVVRGVAMNPVDHPHGGGEG K+SG GR +TPWGK K G KT Sbjct: 107 PRNLNVGDKIISS-DKAEIN--VGNCLPLEVIPVGTIIHNIEIKPGKGGQVARSAGTYAVLLNKD-SGYAQIKFRSGEVRRISLASRATVGSVSNIDHKNISYGKAGRVRWLGRRPVVRGVAMNPVDHPHGGGEG--KTSG--GRHPVTPWGKKTK-GKKT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_HYDS0 (50S ribosomal protein L2 OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=rplB PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.459e-35 Identity = 78/138 (56.52%), Postives = 96/138 (69.57%), Query Frame = -3 Query: 175 GSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 588 G+ MPL + +GT IHNIE+NPG+G KLVRAAG SA+++ + + VRLPSG +LI+ +C ATIG V H KL KAG+SRWLG RP VRG AMNPVDHPHGGGEG++K G+ +PWG K GYKT Sbjct: 137 GNAMPLRFIPVGTFIHNIELNPGRGAKLVRAAGLSAQVIGK-IEGYAQVRLPSGEVRLINDKCMATIGVVGLAEHELVKLGKAGRSRWLGMRPNVRGTAMNPVDHPHGGGEGKTK-----GKHPESPWGWKTK-GYKT 267
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_RHOP2 (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain HaA2) GN=rplB PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.906e-35 Identity = 80/163 (49.08%), Postives = 109/163 (66.87%), Query Frame = -3 Query: 169 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTAS 657 P++ V D ++ A+VD+ G+ MPL M IGTI+HN+E+ G+GG++ R+AGT A+++ + ++RL SG ++L+ RC ATIG VSNP H + KAG++RWLG RP RGV MNP+DHPHGGGEGR+ GR +TPWGKP K G KT S Sbjct: 107 PQRLAVGDTVIAG-AYVDVKP--GNVMPLGNMPIGTIVHNVELKIGKGGQIARSAGTYAQLVGRD-HDYVIMRLNSGEQRLVHGRCTATIGAVSNPDHMNISIGKAGRTRWLGWRPHNRGVVMNPIDHPHGGGEGRTSG----GRHPVTPWGKPTK-GKKTRS 260
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_GEOTN (50S ribosomal protein L2 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rplB PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.906e-35 Identity = 76/152 (50.00%), Postives = 106/152 (69.74%), Query Frame = -3 Query: 175 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCS-LTPWGKPCKSGYKT 627 M M+ + + ++G+ +PL + +GT++HNIE+ PG+GG+LVRAAGTSA++L + + ++RL SG ++I +CRAT+G V N H + KAG++RWLG RP VRG MNPVDHPHGGGEG++ GR S +TPWGKP GYKT Sbjct: 114 MEIMSGPNADIKVGNALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKE-GKYVIIRLASGEVRMILGKCRATVGEVGNEQHELVNIGKAGRARWLGIRPTVRGSVMNPVDHPHGGGEGKAPI----GRKSPMTPWGKP-TLGYKT 259
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_ACIF5 (50S ribosomal protein L2 OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=rplB PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.906e-35 Identity = 70/138 (50.72%), Postives = 97/138 (70.29%), Query Frame = -3 Query: 175 GSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 588 G+CMPL + +G+++HN+E+ PG+GG++ R+AG S +++ + +RL SG + I CRATIG V N HG+++L KAG +RW G RP VRGVAMNPVDHPHGGGEGR+ GR ++PWG+P K GY+T Sbjct: 127 GNCMPLRGIPVGSVVHNVEMRPGKGGQIARSAGASVQLMARE-GDYAQLRLRSGEVRRIHVSCRATIGEVGNEEHGSRQLGKAGATRWRGVRPTVRGVAMNPVDHPHGGGEGRTSG----GRHPVSPWGQPTK-GYRT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_ACIF2 (50S ribosomal protein L2 OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=rplB PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.906e-35 Identity = 70/138 (50.72%), Postives = 97/138 (70.29%), Query Frame = -3 Query: 175 GSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 588 G+CMPL + +G+++HN+E+ PG+GG++ R+AG S +++ + +RL SG + I CRATIG V N HG+++L KAG +RW G RP VRGVAMNPVDHPHGGGEGR+ GR ++PWG+P K GY+T Sbjct: 127 GNCMPLRGIPVGSVVHNVEMRPGKGGQIARSAGASVQLMARE-GDYAQLRLRSGEVRRIHVSCRATIGEVGNEEHGSRQLGKAGATRWRGVRPTVRGVAMNPVDHPHGGGEGRTSG----GRHPVSPWGQPTK-GYRT 258
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_FRATW (50S ribosomal protein L2 OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=rplB PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.489e-35 Identity = 75/153 (49.02%), Postives = 103/153 (67.32%), Query Frame = -3 Query: 175 KIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 633 K M ++ ++ +G+CMPL + +GT+IHNIE+ P +G +++R+AGT A+++ + +++ ++RL SG + + CRA IG VSN H K L KAG RW G RP VRGVAMNPVDHPHGGGEGR+ GR +TPWG P K GYKT Sbjct: 113 KDMSVISGEKVDVAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGKD-NAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGAKRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG----GRHPVTPWGIPTK-GYKT 259
BLAST of CX069469 vs. ExPASy Swiss-Prot
Match: RL2_FRATT (50S ribosomal protein L2 OS=Francisella tularensis subsp. tularensis GN=rplB PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.489e-35 Identity = 75/153 (49.02%), Postives = 103/153 (67.32%), Query Frame = -3 Query: 175 KIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKT 633 K M ++ ++ +G+CMPL + +GT+IHNIE+ P +G +++R+AGT A+++ + +++ ++RL SG + + CRA IG VSN H K L KAG RW G RP VRGVAMNPVDHPHGGGEGR+ GR +TPWG P K GYKT Sbjct: 113 KDMSVISGEKVDVAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGKD-NAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGAKRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG----GRHPVTPWGIPTK-GYKT 259 The following BLAST results are available for this feature:
BLAST of CX069469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069469 ID=CX069469; Name=CX069469; organism=Citrus sinensis; type=EST; length=887bpback to top |