CX069466
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_DAUCA (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Daucus carota GN=ndhG PE=3 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 9.482e-64 Identity = 123/159 (77.36%), Postives = 132/159 (83.02%), Query Frame = -1
Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819
MDLPGPIHD NPIYSAFSLGLVLVC SLFYILSNSHFVAAAQLLIYVGA+NVLIIFAVMFMNGS+Y KDF +LWT+GDG+TS+VCTSIF SLITTI DTSWYGIIWTT++NQI+EQDLISNSQQIGIHLSTDFFLPFE
Sbjct: 1 MDLPGPIHDFLLVFLGSGLILGGLGVVLLPNPIYSAFSLGLVLVCTSLFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNGSEYYKDF--HLWTVGDGVTSMVCTSIFVSLITTIPDTSWYGIIWTTKSNQIVEQDLISNSQQIGIHLSTDFFLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_PLAOC (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Platanus occidentalis GN=ndhG PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 2.112e-63 Identity = 123/159 (77.36%), Postives = 131/159 (82.39%), Query Frame = -1
Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819
MDLPGPIHD TNPIYSAFSLGLVLVCISLFYI SNSHFVAAAQLLIYVGA+NVLIIFAVMFMNGS+Y DF +LWT+GDG+TSL+CTSIF SLITTI DTSWYG+IWTTR+NQIIEQDLISN QQIGIHLSTDFFLPFE
Sbjct: 1 MDLPGPIHDFLLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVLVCISLFYIPSNSHFVAAAQLLIYVGAINVLIIFAVMFMNGSEYYNDF--HLWTVGDGVTSLLCTSIFVSLITTIPDTSWYGVIWTTRSNQIIEQDLISNGQQIGIHLSTDFFLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_ACOCL (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Acorus calamus GN=ndhG PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.759e-63 Identity = 124/159 (77.99%), Postives = 130/159 (81.76%), Query Frame = -1
Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819
MDLPGPIHD TNPIYSAFSLGLVLVCISLFYILSNS+FVAAAQLLIYVGAVNVLIIFAVMFMNGSDYS DF L WT+GDG+TSLVCTSI FSLITTILDTSWYGIIW T +NQI+EQDL SN QQIGIHLSTDF+LPFE
Sbjct: 1 MDLPGPIHDVLLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVLVCISLFYILSNSYFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSNDFYL--WTVGDGVTSLVCTSILFSLITTILDTSWYGIIWNTGSNQIVEQDLTSNVQQIGIHLSTDFYLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_ACOAM (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Acorus americanus GN=ndhG PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.759e-63 Identity = 124/159 (77.99%), Postives = 130/159 (81.76%), Query Frame = -1
Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819
MDLPGPIHD TNPIYSAFSLGLVLVCISLFYILSNS+FVAAAQLLIYVGAVNVLIIFAVMFMNGSDYS DF L WT+GDG+TSLVCTSI FSLITTILDTSWYGIIW T +NQI+EQDL SN QQIGIHLSTDF+LPFE
Sbjct: 1 MDLPGPIHDVLLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVLVCISLFYILSNSYFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSNDFYL--WTVGDGVTSLVCTSILFSLITTILDTSWYGIIWNTGSNQIVEQDLTSNVQQIGIHLSTDFYLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_LACSA (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Lactuca sativa GN=ndhG PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 3.603e-63 Identity = 123/159 (77.36%), Postives = 132/159 (83.02%), Query Frame = -1
Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819
MDLPG IHD NPIYSAFSLGLV VCISLFYILSNSHFVAAAQLLIYVGA+NVLIIFAVMF+NGS+YSKDF +LWT+GDG+TS+VCTS+F SLITTI DTSWYGIIWTT+ANQIIEQDLISNSQQIGIHLSTDFFLPFE
Sbjct: 1 MDLPGLIHDFLLVFLGLGLILGGLGVVLLPNPIYSAFSLGLVFVCISLFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFINGSEYSKDF--HLWTVGDGITSVVCTSLFVSLITTIPDTSWYGIIWTTKANQIIEQDLISNSQQIGIHLSTDFFLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_CARPA (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Carica papaya GN=ndhG PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 3.603e-63 Identity = 124/159 (77.99%), Postives = 131/159 (82.39%), Query Frame = -1
Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819
MDL GPIHD F NPIYSAFSLG VL CISLFYILSNSHFVAAAQLLIYVGA+NVLIIFAVMFMNGS+Y +DF NLWTIGDG+TSLVCTSIF SLITTILDTSWYG+IWTTR NQI+EQDLIS+SQQIGIHLSTDFFLPFE
Sbjct: 1 MDLLGPIHDFLLVFLGSGLILGGLGVVLFPNPIYSAFSLGFVLACISLFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNGSEYYRDF--NLWTIGDGITSLVCTSIFLSLITTILDTSWYGVIWTTRLNQILEQDLISSSQQIGIHLSTDFFLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_HELAN (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Helianthus annuus GN=ndhG PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 6.146e-63 Identity = 122/159 (76.73%), Postives = 132/159 (83.02%), Query Frame = -1
Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819
MDLPG IHD NPIYSAFSLGLV VCISLFYILSNSHFVAAAQLLIYVGA+NVLIIFAVMF+NGS+YSKDF +LWT+GDG+TS+VCTS+F SLITTI DTSWYGIIWTT+ANQIIEQDLISNSQQIGIHLSTDFF+PFE
Sbjct: 1 MDLPGLIHDFLLVFLGLGLILGGLGVVLLANPIYSAFSLGLVFVCISLFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFINGSEYSKDF--HLWTVGDGVTSVVCTSLFVSLITTIPDTSWYGIIWTTKANQIIEQDLISNSQQIGIHLSTDFFIPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_MANES (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Manihot esculenta GN=ndhG PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 8.027e-63 Identity = 124/159 (77.99%), Postives = 129/159 (81.13%), Query Frame = -1
Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819
MDLPG IHD TNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGA+NVLIIFAVMFMNGS+Y KDF NLWT+G G+TSLVCTSIF SLIT I DTSWYGIIWTT+ NQIIEQDLISN QQIGIHLSTDFFLPFE
Sbjct: 1 MDLPGLIHDFLLVFLGLGLILGGLGVVLLTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNGSEYYKDF--NLWTVGSGVTSLVCTSIFVSLITIIPDTSWYGIIWTTKTNQIIEQDLISNGQQIGIHLSTDFFLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_GUIAB (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Guizotia abyssinica GN=ndhG PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 8.027e-63 Identity = 122/159 (76.73%), Postives = 132/159 (83.02%), Query Frame = -1
Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819
MDLPG IHD NPIYSAFSLGLV VCISLFYIL+NSHFVAAAQLLIYVGA+NVLIIFAVMF+NGS+YSKDF +LWT+GDG+TS+VCTS+F SLITTI DTSWYGIIWTT+ANQIIEQDLISNSQQIGIHLSTDFFLPFE
Sbjct: 1 MDLPGLIHDFLLVFLGLGLILGGLGVVLLANPIYSAFSLGLVFVCISLFYILANSHFVAAAQLLIYVGAINVLIIFAVMFINGSEYSKDF--HLWTVGDGVTSVVCTSLFVSLITTIPDTSWYGIIWTTKANQIIEQDLISNSQQIGIHLSTDFFLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_LOBMA (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Lobularia maritima GN=ndhG PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.369e-62 Identity = 120/159 (75.47%), Postives = 130/159 (81.76%), Query Frame = -1
Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819
MDLPGPIHD NPI+SAFSLG VLVCISL YILSNSHFVAAAQLLIYVGA+NVLIIFAVMFMN S+YS DF NLWT+GDG+TSLVCT+I FSLI+TILDTSWYG+IWTTR NQ++EQDLISNSQQIGIHLSTDFFLPFE
Sbjct: 1 MDLPGPIHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNDSEYSTDF--NLWTVGDGITSLVCTTILFSLISTILDTSWYGVIWTTRLNQLLEQDLISNSQQIGIHLSTDFFLPFE 157 The following BLAST results are available for this feature:
BLAST of CX069466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069466 ID=CX069466; Name=CX069466; organism=Citrus sinensis; type=EST; length=873bpback to top |