CX069466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_DRANE (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Draba nemorosa GN=ndhG PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.159e-61 Identity = 119/159 (74.84%), Postives = 129/159 (81.13%), Query Frame = -1 Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIHD NPI+SAFSLG VLVCISLFYILSNSHFVAAAQLLIYVGA+NVLIIFAVMFMN S+YS DF LWT+GDG+TSLVCT++ FSLI+TILDTSWY +IWTTR NQI+EQDLISNSQQIGIHLSTDFFLPFE Sbjct: 1 MDLPGPIHDFLLVFLGFGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNDSEYSTDF--TLWTVGDGITSLVCTTLLFSLISTILDTSWYRVIWTTRLNQILEQDLISNSQQIGIHLSTDFFLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_CERDE (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Ceratophyllum demersum GN=ndhG PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.159e-61 Identity = 121/159 (76.10%), Postives = 131/159 (82.39%), Query Frame = -1 Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIHD FT PIYSAFSLGLV VCISLFYI SNS+FVAAAQLLIYVGAVNVLI+FAVMFMNGS+Y KDF +LWT+GDG+TSLVCTSI FSLITTIL+TSWYGIIWTTR+NQIIEQDL SN QQ+GIHLSTDF+LPFE Sbjct: 1 MDLPGPIHDILLVFLGSGLILGGLGVVLFTTPIYSAFSLGLVFVCISLFYIPSNSYFVAAAQLLIYVGAVNVLIVFAVMFMNGSEYYKDF--HLWTVGDGITSLVCTSILFSLITTILETSWYGIIWTTRSNQIIEQDLTSNVQQMGIHLSTDFYLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_BARVE (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Barbarea verna GN=ndhG PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.159e-61 Identity = 119/159 (74.84%), Postives = 130/159 (81.76%), Query Frame = -1 Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIHD NPI+SAFSLG VLVCISL YILSNSHFVAAAQLLIYVGA+NVLIIFAVMFMN S+YS D LNLWT+G+G+TSLVCT+I FSL++TILDTSWYG+IWTTR NQI+EQDLISNSQQIGIHLSTDFFLPFE Sbjct: 1 MDLPGPIHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNDSEYSTD--LNLWTVGNGITSLVCTTILFSLMSTILDTSWYGVIWTTRLNQILEQDLISNSQQIGIHLSTDFFLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_LEPVR (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Lepidium virginicum GN=ndhG PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.977e-61 Identity = 118/159 (74.21%), Postives = 129/159 (81.13%), Query Frame = -1 Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIHD NPI+SAFSLG VL CISL YILSNSHFVAAAQLLIYVGA+NVLIIFAVMFMN S+YS DF NLWT+G+G+TSLVCT+I FSL++TILDTSWYG+IWTTR NQI+EQDLISNSQQIGIHLSTDFFLPFE Sbjct: 1 MDLPGPIHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLFCISLLYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNDSEYSTDF--NLWTVGNGITSLVCTTILFSLLSTILDTSWYGVIWTTRLNQILEQDLISNSQQIGIHLSTDFFLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_OLIPU (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Olimarabidopsis pumila GN=ndhG PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 3.372e-61 Identity = 118/159 (74.21%), Postives = 129/159 (81.13%), Query Frame = -1 Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIHD NPI+SAFSLG VLVCISL YILSNSHFVAAAQLLIYVGA+NVLIIFAVMFMN S+YS DF NLWT+G+G+TSLVCT+I F L++TILDTSWYG+IWTTR NQI+EQDLISNSQQIGIHLSTDFFLPFE Sbjct: 1 MDLPGPIHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNDSEYSTDF--NLWTVGNGITSLVCTTILFLLMSTILDTSWYGVIWTTRLNQILEQDLISNSQQIGIHLSTDFFLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_PIPCE (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Piper cenocladum GN=ndhG PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 5.753e-61 Identity = 119/159 (74.84%), Postives = 129/159 (81.13%), Query Frame = -1 Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 M LPGPIHD TN IYSAFSLG VLVCISLFYILSNS+FVAAAQLLIYVGA+NVLIIFAVMFM GS+YS DF ++WT+GDG+TSLVCTSIFFSLITTILDTSWYGIIWTTR+NQI+EQDL+SN QQIGIHL TDF LPFE Sbjct: 1 MGLPGPIHDILLVFLGSGIVLGSLGVILLTNTIYSAFSLGFVLVCISLFYILSNSYFVAAAQLLIYVGAINVLIIFAVMFMKGSEYSNDF--SIWTVGDGVTSLVCTSIFFSLITTILDTSWYGIIWTTRSNQIMEQDLLSNVQQIGIHLVTDFILPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_NASOF (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Nasturtium officinale GN=ndhG PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 5.753e-61 Identity = 118/159 (74.21%), Postives = 129/159 (81.13%), Query Frame = -1 Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIHD NPI+SAFSLG VLVCISL YILSNSHFVAAAQLLIYVGA+NVLIIFAVMFMN S+YS D NLWT+G+G+TSLVCT+I FSL++TILDTSWYG+IWTTR NQI+EQDLISNSQQIGIHLSTDFFLPFE Sbjct: 1 MDLPGPIHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNDSEYSTDS--NLWTVGNGITSLVCTTILFSLMSTILDTSWYGVIWTTRLNQILEQDLISNSQQIGIHLSTDFFLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_NANDO (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Nandina domestica GN=ndhG PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 5.753e-61 Identity = 118/159 (74.21%), Postives = 129/159 (81.13%), Query Frame = -1 Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLP PIHD TNPIYSAFSLGLVLVCISLF+I +NSHFVAAAQLLIYVGA+NVLI+FAVMFMNGS+Y DF +LWT+GDG+TSLVCTSIF SLITTI DTSWYGIIWTTR+NQIIEQDLI+ QQ+GIHLSTDFFLPFE Sbjct: 1 MDLPAPIHDFLLVFLGLGLIVGGLGVVLLTNPIYSAFSLGLVLVCISLFHIPANSHFVAAAQLLIYVGAINVLIVFAVMFMNGSEYYNDF--HLWTVGDGVTSLVCTSIFVSLITTISDTSWYGIIWTTRSNQIIEQDLINKGQQLGIHLSTDFFLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_JASNU (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Jasminum nudiflorum GN=ndhG PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 5.753e-61 Identity = 119/159 (74.84%), Postives = 129/159 (81.13%), Query Frame = -1 Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIHD NPIYSAFSLGLVL CISLFYIL NS+FVAAAQLLIYVGA+NVLIIFAVMFMNGS+Y KDF L WT+GDG+TS+VCTS+F SLITTI DTSWYGIIWTT++NQIIE+DLISNSQQIGIHL TDFFLPFE Sbjct: 1 MDLPGPIHDFLLVFLELGLILGSLGVVFLPNPIYSAFSLGLVLFCISLFYILLNSYFVAAAQLLIYVGAINVLIIFAVMFMNGSEYYKDFYL--WTVGDGVTSMVCTSLFISLITTIPDTSWYGIIWTTKSNQIIEKDLISNSQQIGIHLVTDFFLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_CHLSC (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Chloranthus spicatus GN=ndhG PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 5.753e-61 Identity = 121/159 (76.10%), Postives = 128/159 (80.50%), Query Frame = -1 Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIHD TNPI SAFSLGLVLVCISLFYI SNS+FVAAAQLLIYVGA+NVLI+FAVMFMNGS+Y DF +LWTIGDG TSLVCTSI FSLITTI DTSWYGIIWTTR+NQIIEQDL SN QQIGIHLSTDF+LPFE Sbjct: 1 MDLPGPIHDILLVFLGSGLILGGLGVVLLTNPISSAFSLGLVLVCISLFYIPSNSYFVAAAQLLIYVGAINVLIVFAVMFMNGSEYYNDF--HLWTIGDGFTSLVCTSILFSLITTIPDTSWYGIIWTTRSNQIIEQDLTSNVQQIGIHLSTDFYLPFE 157 The following BLAST results are available for this feature:
BLAST of CX069466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069466 ID=CX069466; Name=CX069466; organism=Citrus sinensis; type=EST; length=873bpback to top |