CX069466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_MAIZE (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Zea mays GN=ndhG PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 5.572e-56 Identity = 110/159 (69.18%), Postives = 125/159 (78.62%), Query Frame = -1 Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIH+ TNPIYSAFSLGLVLVCISLFY L NS+FVA AQLLIYVGA+NVLIIFAVMF+NGS++SKD N WTIGDG T L+C +I FSL+TTI DTSWYGI+WTTR+NQI+EQ LI+N QQIGIHL+TDF+LPFE Sbjct: 1 MDLPGPIHEILVLFGGFGLLLGGLGVVLLTNPIYSAFSLGLVLVCISLFYFLLNSYFVAVAQLLIYVGAINVLIIFAVMFVNGSEWSKD--KNYWTIGDGFTLLLCITIPFSLMTTIPDTSWYGILWTTRSNQIVEQGLINNVQQIGIHLATDFYLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_FAGEA (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Fagopyrum esculentum subsp. ancestrale GN=ndhG PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.241e-55 Identity = 111/159 (69.81%), Postives = 128/159 (80.50%), Query Frame = -1 Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPIHD FTNPI+SAFSLGLVLVCISLFYI++NS FVA+AQLLIYVGA+NVLIIFAVMF+NG +Y K+ L L+T+GDG+T ++CT IFF LITTIL+TS YGIIWTT+ NQI+EQDLI+NSQQIGIHLSTDFF PFE Sbjct: 1 MDLPGPIHDFLLVFFGSGLILGGLGVILFTNPIFSAFSLGLVLVCISLFYIIANSQFVASAQLLIYVGAINVLIIFAVMFINGLEYDKN--LRLFTLGDGMTLVICTGIFFLLITTILNTSGYGIIWTTKLNQILEQDLINNSQQIGIHLSTDFFPPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_CYCTA (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cycas taitungensis GN=ndhG PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.986e-45 Identity = 98/159 (61.64%), Postives = 112/159 (70.44%), Query Frame = -1 Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 MDLPGPI D TN IYSA SLG VLVCISL YIL N+ FVAAAQ+LIYVGAVNVLI+FAVM MN Y + LWT+GDG+T +VCTS+F SLIT IL+TSW I TT++NQI+EQDL +N Q+IG HLSTDFFLPFE Sbjct: 1 MDLPGPIRDILLVPLELGLILGGLEVVLLTNIIYSALSLGPVLVCISLLYILLNADFVAAAQILIYVGAVNVLIVFAVMLMNNQKYPNF--VPLWTVGDGITLVVCTSLFCSLITIILNTSWSEISMTTKSNQILEQDLTNNVQRIGAHLSTDFFLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_CRYJA (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cryptomeria japonica GN=ndhG PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.548e-40 Identity = 80/130 (61.54%), Postives = 102/130 (78.46%), Query Frame = -1 Query: 343 TNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 732 TN IYSA SLGLVL+CIS FYI+ N+ FVA AQ+LIY+GAVN+LI+FAVM MN Y WT+GD ++S+VCTS+F SLIT IL+ SW+GI T +++Q++E+DL +N Q+IG HLSTDFFLPFE Sbjct: 30 TNIIYSALSLGLVLICISFFYIILNADFVAVAQILIYIGAVNILILFAVMLMNNPKYPN--YAPPWTVGDSISSIVCTSLFCSLITIILNISWFGISLTQKSDQMLERDLTNNIQRIGAHLSTDFFLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_MARPO (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Marchantia polymorpha GN=ndhG PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.021e-30 Identity = 72/131 (54.96%), Postives = 89/131 (67.94%), Query Frame = -1 Query: 343 TNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNS-QQIGIHLSTDFFLPFE 732 TN +YSA LG V VCISL Y+L N+ FVAAAQ+LIYVGAVNVLIIFAVM +N YS F WTIGDG+T +CTSIF L I +TSW I T+ N +++ ++ N+ + IG L T+F LPFE Sbjct: 30 TNIVYSALFLGFVFVCISLLYLLLNADFVAAAQILIYVGAVNVLIIFAVMLINKKQYSNFFV--YWTIGDGITLTLCTSIFLLLNNFISNTSWSKIFLMTKPNLVVKDIILINTVRHIGSELLTEFLLPFE 158
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_ANTFO (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Anthoceros formosae GN=ndhG PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.170e-29 Identity = 72/130 (55.38%), Postives = 90/130 (69.23%), Query Frame = -1 Query: 343 TNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 732 TN +YSAF LGLV VCIS Y+L ++ FVA AQ+LIYVGAVN+LI+FAVM +N S F L WT+GD +T ++CTS+FF LI+ IL SW I ++N+I EQ L S+ Q IG L DF LPFE Sbjct: 33 TNIVYSAFLLGLVFVCISFLYLLLDADFVATAQILIYVGAVNILIVFAVMLIN-KPQSLQF-LPSWTVGDTITLILCTSLFFLLISMILSISWSNIFSIAQSNKIGEQVLKSSVQGIGSSLLIDFLLPFE 160
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_PHYPA (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Physcomitrella patens GN=ndhG PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.528e-29 Identity = 71/161 (44.10%), Postives = 94/161 (58.39%), Query Frame = -1 Query: 343 NIMDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 825 NI++L GP+ + +N +YSAF LGLV CISL Y N+ FVAAAQ+LIYVGAVNVLI+FAVM +N + K F +WT+GD +T +C + FF L+ IL+TSW I T + +E + N Q+IG L T + LPFE Sbjct: 2 NIIELFGPLQEIIFFILEIGVILGSLGVVLLSNIVYSAFFLGLVFFCISLLYFALNADFVAAAQILIYVGAVNVLIVFAVMLINKPESLKIFP--VWTVGDKITLAICLTSFFLLVNIILNTSWSNITVITESKGFLESNFTQNVQRIGSLLLTQYLLPFE 160
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_HUPLU (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Huperzia lucidula GN=ndhG PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.528e-29 Identity = 69/130 (53.08%), Postives = 84/130 (64.62%), Query Frame = -1 Query: 343 TNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 732 TN +YSAF LG V VCIS YIL N+ FVAA Q+LIYVG +NVLI+FAVM +N Y + L WT+GDG +CTS F S+I IL T W I +N+I+E+ L N Q+IG H TD LPFE Sbjct: 33 TNIVYSAFLLGWVPVCISFLYILLNADFVAAVQILIYVGTINVLIVFAVMLINKPQYFR--FLKYWTVGDGTALALCTSPFLSIIAAILSTPWSKISLIVLSNKIVEEPLTDNVQRIGFHSLTDSPLPFE 160
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_ANGEV (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Angiopteris evecta GN=ndhG PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.270e-27 Identity = 72/160 (45.00%), Postives = 91/160 (56.88%), Query Frame = -1 Query: 343 MDLPGPIHDXXXXXXXXXXXXXXXXXXXFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQL-NLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 819 M LP PIH TN +YSA LGLV +CISL Y++ N+ FVAAAQ+LIYVGAVNVL +FAVM + D K+ L + +GD +T VCTS+F L I D SW I T ++ + +EQ L ++ Q IG L T F LPFE Sbjct: 1 MILPEPIHKVILVIIELGILLGSLGVVLLTNIVYSALLLGLVFICISLLYLVLNADFVAAAQVLIYVGAVNVLTVFAVMLI---DKPKNITLFSFSNVGDNITLGVCTSLFILLTIMIPDASWSEIYMTKQSTKFVEQGLTTDVQLIGSQLLTKFLLPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_PSINU (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Psilotum nudum GN=ndhG PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.339e-25 Identity = 63/127 (49.61%), Postives = 86/127 (67.72%), Query Frame = -1 Query: 343 IYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 723 + SAFSLGL + ISL Y++ N+ FVAAAQ+LIYVGA+NVLI+F+VM + ++D + T G+ +T +VCTS+F L++ ILDTSW I ++ +I E L SN Q IG L T+F LPFE Sbjct: 33 VQSAFSLGLTFISISLLYLVLNADFVAAAQVLIYVGAINVLIVFSVMLIQKPHKNEDLSTSRNT-GNNITLIVCTSLFLFLVSIILDTSWSQIYSIKKSTKIFEPILKSNVQLIGSQLLTEFLLPFE 158 The following BLAST results are available for this feature:
BLAST of CX069466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069466 ID=CX069466; Name=CX069466; organism=Citrus sinensis; type=EST; length=873bpback to top |