CX069466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_ZYGCR (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Zygnema circumcarinatum GN=ndhG PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.296e-20 Identity = 55/127 (43.31%), Postives = 78/127 (61.42%), Query Frame = -1 Query: 343 IYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 723 IYSA LG V +C++L Y+L N+ F+AAAQ+LIYVGAVNVLI+FA+M ++ D D + T G+ +++ ++F L I TSW ++++ Q L+SN Q IG HL TD PFE Sbjct: 34 IYSALLLGFVFICVALLYLLLNADFLAAAQVLIYVGAVNVLIVFAIMLVSTPD---DVKNKPKTTGEIISAFTFIALFVLLTIMIFTTSWDTHHNLATQDEVLLQPLMSNVQTIGFHLLTDLLFPFE 157
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_STAPU (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Staurastrum punctulatum GN=ndhG PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.171e-19 Identity = 56/127 (44.09%), Postives = 77/127 (60.63%), Query Frame = -1 Query: 343 IYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 723 IYSA LG+V VC++L Y+L N+ F+AAAQ+LIYVGA+NVLI+FA+M +N + T GD L+ +F LI IL+T+W + T +Q ++ + IGIHL TD LPFE Sbjct: 36 IYSALFLGVVFVCVALLYLLLNADFLAAAQILIYVGAINVLIVFAIMLINKPE--TKINKKKITFGDILSGFSVFGLFSFLIIMILNTTW---LQPTLVSQEVKNS-FQSIDIIGIHLLTDLLLPFE 156
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_MESVI (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Mesostigma viride GN=ndhG PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.585e-18 Identity = 53/129 (41.09%), Postives = 74/129 (57.36%), Query Frame = -1 Query: 343 NPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 729 N +YS F LG VL+CI+ Y+L N+ F+AAAQ+LIYVGA+NV+I+FA+M +N + N + +GL+S +C S F L I DT W + + I IG H+ +DF LPFE Sbjct: 31 NILYSGFLLGGVLICIAGIYLLLNAEFIAAAQVLIYVGAINVIILFAIMLVNKIENLN--PSNNQMMRNGLSSFICFSFFILLSNMIFDTQWIDTVGVSTKYSI---------SIIGNHIFSDFLLPFE 148
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_ADICA (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Adiantum capillus-veneris GN=ndhG PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.585e-18 Identity = 56/129 (43.41%), Postives = 74/129 (57.36%), Query Frame = -1 Query: 343 NPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 729 N + SAFSLGLV CISL Y + N+ FVAAAQLL+YVGA+NVL +FAVM +D + IG +T+ CT +F L I +T W + ++ L SN QQ+G L +F +PFE Sbjct: 31 NTVNSAFSLGLVFTCISLLYFVLNADFVAAAQLLVYVGAINVLTVFAVMI---TDEPAGSETTARGIGYIITAGTCTILFSILSFVIHNTKWSDLSLIPQSGISTSGTLGSNVQQLGYKLLGEFVIPFE 156
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_PLEBO (NAD(P)H-quinone oxidoreductase chain 6 OS=Plectonema boryanum GN=ndhG PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.866e-18 Identity = 58/129 (44.96%), Postives = 75/129 (58.14%), Query Frame = -1 Query: 343 NPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 729 N +YSAF LG V + I+ Y+L N+ FVAAAQ+LIYVGAVNVLI+FA+M +N + + + W I T+LVC IF L +L T W IE +I+ IG+H TDF LPFE Sbjct: 31 NVVYSAFLLGGVFISIAGLYLLLNADFVAAAQVLIYVGAVNVLILFAIMLVNKREAFQPIAKS-W-IRRAATALVCAGIFALLSAMVLTTP-----WAISTAVPIESSIIT----IGLHFFTDFLLPFE 148
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_SYNY3 (NAD(P)H-quinone oxidoreductase chain 6 OS=Synechocystis sp. (strain PCC 6803) GN=ndhG PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 1.027e-17 Identity = 59/131 (45.04%), Postives = 78/131 (59.54%), Query Frame = -1 Query: 343 TNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMN-GSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 732 +N +YSAF LG V + IS YIL N+ FVAAAQ+L+YVGAV+VLI+FA+M +N D+SK L + T+LVCT IF L T +L T W +E L++ IG H +D+ LPFE Sbjct: 30 SNIVYSAFLLGGVFLSISGIYILLNADFVAAAQVLVYVGAVSVLILFAIMLVNKREDFSKIPGRWLRNVS---TALVCTGIFALLSTMVLITPWQ----INETGPFVENTLVT----IGKHFFSDYLLPFE 149
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_CHLAT (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Chlorokybus atmophyticus GN=ndhG PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 7.362e-16 Identity = 56/137 (40.88%), Postives = 79/137 (57.66%), Query Frame = -1 Query: 343 NPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSD-YSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWY--GIIWTT----RANQIIEQDLISNS-QQIGIHLSTDFFLPFE 729 N +YSAF LG VL+ I+ Y+L N+ FVAAAQ+LIYVGA+NVLI+FA+M +N +D N + + + L C + LI I+ T W G+ T +A+ Q + S IG+H+ +DF LPFE Sbjct: 31 NILYSAFLLGGVLMSIAGIYLLLNADFVAAAQVLIYVGAINVLILFAIMLVNKNDGRVAAGTSNSSGVTNNIIGLTCIGLAGFLIDMIVTTPWLPKGVAVATSLSAKADSTAAQTQLKGSISIIGLHIFSDFLLPFE 167
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_CHAVU (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Chara vulgaris GN=ndhG PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.654e-15 Identity = 50/129 (38.76%), Postives = 80/129 (62.02%), Query Frame = -1 Query: 343 NPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 729 N +Y+A SL LVL I+L Y+ ++ F+A Q+LIYVGA+NVLI+FA+M ++ S F + +T +++ C S+F L+ IL T W+T+++ I+ + + QIGI+L ++F LPFE Sbjct: 32 NIVYAAISLALVLSLIALLYLFFDADFLAVTQILIYVGAINVLILFAIMLIS-LPKSSTF-IFYFTKKSQISAFACISLFVLLVKIILQTP-----WSTQSSYILLNE-NNKLDQIGIYLLSNFLLPFE 152
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_ANASP (NAD(P)H-quinone oxidoreductase chain 6 OS=Anabaena sp. (strain PCC 7120) GN=ndhG PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.813e-14 Identity = 54/132 (40.91%), Postives = 73/132 (55.30%), Query Frame = -1 Query: 343 TNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMN-GSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSW-YGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 732 T+ +YSAF LG V + I+ Y+L N FVAAAQ+L+YVGAVNVLI+FA+M +N D++ + + LT++V +F L T +L T W Y II IG H +DF LPFE Sbjct: 30 TSIVYSAFLLGGVFISIAGMYLLLNGDFVAAAQVLVYVGAVNVLILFAIMLVNKRQDFTPYPSAGIRKV---LTAIVSVGLFALLSTMVLATPWAYSTTPKVGDGSII---------VIGEHFFSDFLLPFE 149
BLAST of CX069466 vs. ExPASy Swiss-Prot
Match: NU6C_CHAGL (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Chaetosphaeridium globosum GN=ndhG PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.999e-14 Identity = 46/129 (35.66%), Postives = 73/129 (56.59%), Query Frame = -1 Query: 343 NPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 729 N IYSA LGL + ++L Y+L S F++ AQ++IYVGA+NVLI+FA+M +N ++ K +W D L S I FS I T++ T+ + ++ ++ + +S +IG + LPFE Sbjct: 29 NIIYSALFLGLTFLSVALLYLLLGSEFLSVAQVIIYVGAINVLIVFAIMLVNKPEFDKKDM--IWVPID-LKSFCVNFILFSTIVTMIVTTPWKLLVNNIDVKLNSLNFLSPIAKIGYQFLSTLVLPFE 154 The following BLAST results are available for this feature:
BLAST of CX069466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069466 ID=CX069466; Name=CX069466; organism=Citrus sinensis; type=EST; length=873bpback to top |