CX069464

Overview
NameCX069464
Unique NameCX069464
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_OENEH (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Oenothera elata subsp. hookeri GN=ndhJ PE=3 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.374e-87
Identity = 148/158 (93.67%), Postives = 155/158 (98.10%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPE+WHS+AVILY+YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQ EEVCIKVFAPR+NP+IPSVFWVWKSA+FQERESYDMLGI YDNHPRL RILMPESWIGWPLRKDYIAPNFYEIQDA+
Sbjct:    1 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQAEEVCIKVFAPRNNPRIPSVFWVWKSADFQERESYDMLGIRYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_OENBI (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Oenothera biennis GN=ndhJ PE=3 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.374e-87
Identity = 148/158 (93.67%), Postives = 155/158 (98.10%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPE+WHS+AVILY+YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQ EEVCIKVFAPR+NP+IPSVFWVWKSA+FQERESYDMLGI YDNHPRL RILMPESWIGWPLRKDYIAPNFYEIQDA+
Sbjct:    1 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQAEEVCIKVFAPRNNPRIPSVFWVWKSADFQERESYDMLGIRYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_OENAR (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Oenothera argillicola GN=ndhJ PE=3 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.374e-87
Identity = 148/158 (93.67%), Postives = 155/158 (98.10%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPE+WHS+AVILY+YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQ EEVCIKVFAPR+NP+IPSVFWVWKSA+FQERESYDMLGI YDNHPRL RILMPESWIGWPLRKDYIAPNFYEIQDA+
Sbjct:    1 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQAEEVCIKVFAPRNNPRIPSVFWVWKSADFQERESYDMLGIRYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_NANDO (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Nandina domestica GN=ndhJ PE=3 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.374e-87
Identity = 147/158 (93.04%), Postives = 154/158 (97.47%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHS+AVI Y+YGYNYLRSQCAYDVAPGGLLASVYHLTRI+YGVDQPEEVCIKVFAPR NP+IPSVFW+WKSA+FQERESYDMLGI YDNHPRL RILMPESWIGWPLRKDYIAPNFYEIQDA+
Sbjct:    1 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSIAVISYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEVCIKVFAPRRNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_MORIN (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Morus indica GN=ndhJ PE=3 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 4.049e-87
Identity = 145/158 (91.77%), Postives = 154/158 (97.47%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQGRLS WL+KHGLVHRSLGFDYQGIETLQIKPEDWHS+AVILY+YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEEVCIKVFAPR NP+IPSVFW+WKSA+FQERESYDMLGI Y+NHPRL RILMPESWIGWPLRKDYIAPNFYEIQDA+
Sbjct:    1 MQGRLSVWLIKHGLVHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAPRRNPRIPSVFWIWKSADFQERESYDMLGISYNNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_DAUCA (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Daucus carota GN=ndhJ PE=3 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 6.907e-87
Identity = 146/158 (92.41%), Postives = 153/158 (96.84%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQGRLSAWLVKHGL+HRSLGFDYQGIETLQIKPEDWHS+AVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVF+PR NP+IPSVFWVWK  +FQERES+DMLGI YDNHPRL RILMPESWIGWPLRKDYIAPNFYEIQDA+
Sbjct:    1 MQGRLSAWLVKHGLIHRSLGFDYQGIETLQIKPEDWHSIAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFSPRKNPRIPSVFWVWKGVDFQERESFDMLGISYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_BUXMI (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Buxus microphylla GN=ndhJ PE=3 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 6.907e-87
Identity = 145/158 (91.77%), Postives = 153/158 (96.84%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHS+AVI Y+YGYNYLRSQCAYDVAPGGLLASVYHLTRI+YGVDQPEE+CIKVF PR NP+IPSVFW+WKSA+FQERESYDMLGI YDNHPRL RILMPESWIGWPLRKDYIAPNFYEIQDA+
Sbjct:    1 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSIAVISYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEICIKVFTPRKNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_RANMC (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Ranunculus macranthus GN=ndhJ PE=3 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 1.178e-86
Identity = 146/158 (92.41%), Postives = 153/158 (96.84%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQGRLSAWL KH LVHRSLGFDYQGIETLQIKPEDWHS+AVILY+YGYNYLRSQCAYDVAPGGLLASVYHLTRI+YGVDQPEEVCIKVFAPR NP+IPSVFW+WKSA+FQERESYDMLGI YDNHPRL RILMPESWIGWPLRKDYIAPNFYEIQDA+
Sbjct:    1 MQGRLSAWLAKHRLVHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEVCIKVFAPRRNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_CICAR (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cicer arietinum GN=ndhJ PE=3 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 1.178e-86
Identity = 145/158 (91.77%), Postives = 153/158 (96.84%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQG LSAWLVKHG+VHRSLGFDYQGIETLQIKPEDWHS+AVILY+YGYNYLRSQCAYDVAPGGLLASVYHLTRIEY +DQPEEVCIKVFAPR NP+IPS+FWVWKSA+FQERESYDMLGI YDNHPRL RILMPESWIGWPLRKDYIAPNFYEIQDA+
Sbjct:    1 MQGNLSAWLVKHGIVHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYSLDQPEEVCIKVFAPRKNPRIPSIFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_PANGI (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Panax ginseng GN=ndhJ PE=3 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 2.010e-86
Identity = 145/158 (91.77%), Postives = 152/158 (96.20%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQGRLSAWLVKHGL+HRSLGFDYQGIETLQIKPEDWHS+AVILY+YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPR NP+IPSVFWVWKS +FQERESYDMLGI Y  HPRL RILMPESW+GWPLRKDYIAPNFYEIQDA+
Sbjct:    1 MQGRLSAWLVKHGLIHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRRNPRIPSVFWVWKSVDFQERESYDMLGIFYATHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158
The following BLAST results are available for this feature:
BLAST of CX069464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
NDHJ_OENEH2.374e-8793.67NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]
NDHJ_OENBI2.374e-8793.67NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]
NDHJ_OENAR2.374e-8793.67NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]
NDHJ_NANDO2.374e-8793.04NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]
NDHJ_MORIN4.049e-8791.77NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]
NDHJ_DAUCA6.907e-8792.41NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]
NDHJ_BUXMI6.907e-8791.77NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]
NDHJ_RANMC1.178e-8692.41NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]
NDHJ_CICAR1.178e-8691.77NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]
NDHJ_PANGI2.010e-8691.77NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10F04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10F04-K8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069464 ID=CX069464; Name=CX069464; organism=Citrus sinensis; type=EST; length=800bp
AAATCTATGAAGATCGAATTCGATTGCAACGGGAGAATCGCTCGTTTACT
TTTACTACCAATCACAAGTTTCGTGTTGTATGCAGTACTAATACTGGAAA
TTATGATCAAGGATTACTTTATCAACCACCATCTACGTCAGAAATCCCGC
CTGAAACCTTTTTCAAATACAAAAGTTCAGTATCTTCCCCCGAATTCATT
AATTAGGCAGGAGGATTCATTTGTACAGAATAAGAAAGAGCGAATTAATC
TTCATAAATTCCAAAAATTCATCGTAAATGTGAAATATTTATCGAAATCA
AAATGTGGGAGAGATAAAAAAGATGCAGGGTCGTTTGTCTGCTTGGCTGG
TCAAGCATGGGCTAGTTCATAGATCTTTGGGCTTTGATTACCAAGGAATA
GAAACTTTACAAATAAAGCCCGAGGATTGGCACTCCGTTGCTGTCATTTT
GTATATATATGGCTACAATTATCTACGGTCCCAATGTGCCTATGATGTAG
CACCGGGCGGACTGTTAGCCAGTGTGTATCATCTTACGCGAATAGAGTAT
GGTGTAGATCAACCAGAAGAGGTATGCATAAAAGTATTTGCTCCAAGGAG
TAATCCTAAAATTCCATCGGTTTTCTGGGTTTGGAAAAGTGCGAATTTTC
AAGAACGGGAATCTTATGATATGCTGGGAATCCTTTATGATAATCATCCA
CGACTGANACGTATCTTAATGCCTGAAAGTTGGATAGGGTGGCCCTTACG
TAAGGATTATATTGCCCCCAATTTTTATGAAATACAAGATGCTTATTGAA
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