CX069464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_SYNR3 (NAD(P)H-quinone oxidoreductase subunit J OS=Synechococcus sp. (strain RCC307) GN=ndhJ PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.020e-31 Identity = 73/170 (42.94%), Postives = 105/170 (61.76%), Query Frame = 2 Query: 296 NQNVGEIKKMQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVD--QPEEVCIKVFAPRSNP-KIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796 NQ++ E + G LS WL G H+ LG D+ GIE L ++P VA L G++YL+ Q +D PG L S YHL ++ G D EV ++V R +PS++ +++ A++QERE++D+ GI Y HP R+LMPE W+G+PLRKDY+ P+FYE+QDAY Sbjct: 9 NQDLPEAPQA-GPLSQWLTSQGFDHQILGNDHLGIERLGVEPLALPLVATALKSKGFDYLQVQGGFDQGPGEPLVSFYHLVQVG-GSDGASTAEVRLEVSLARDGDLTVPSLYPLFRGADWQERETFDLFGINYSGHPHPKRLLMPEDWVGYPLRKDYVQPDFYELQDAY 176
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_SYNPX (NAD(P)H-quinone oxidoreductase subunit J OS=Synechococcus sp. (strain WH8102) GN=ndhJ PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.564e-30 Identity = 68/165 (41.21%), Postives = 98/165 (59.39%), Query Frame = 2 Query: 329 GRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVD--------QPEEVCIKVFAPRSN-PKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796 G +S WL + G H++L D+ GIE + + +A L G++YL+ YD PG L YHL + ++ Q EV +KVF R P +PS++ +++ A++QERE++DM GI +D HP R+LMPE W GWPLRKDY+ P+FYE+QDAY Sbjct: 24 GPVSQWLQQQGFEHQALEPDHVGIEQIGVDAAVLPIIAAALKSNGFDYLQCHGGYDEGPGERLVCFYHLLAMAEQLEAMASDPAAQLREVRLKVFLSREGTPVLPSIYGLFRGADWQERETFDMYGIQFDGHPHPKRLLMPEDWKGWPLRKDYVQPDFYEMQDAY 188
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_PROMT (NAD(P)H-quinone oxidoreductase subunit J OS=Prochlorococcus marinus (strain NATL2A) GN=ndhJ PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.043e-30 Identity = 68/163 (41.72%), Postives = 102/163 (62.58%), Query Frame = 2 Query: 317 KKMQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRI-EYGVD-QPEEVCIKVFAPRSNP-KIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796 +K+ G +S WL +G + L D+ GIE ++I P + ++ L G+NYL+ Q YD PG + Y+L + E D P EV +KVF R+ +PS++ +++ A++QERE++DM G+ + HP R+LMPE W GWPLRKDY+ P+FYE+QDAY Sbjct: 11 EKISGPISDWLSNNGFENIPLKEDHLGIEVIKISPNNLLTIVEALKNDGFNYLQCQGGYDEGPGLNIVCFYNLIEMNELKEDISPREVRLKVFLDRNGDLTVPSLYSLFRGADWQERETFDMYGVNFQGHPHPKRLLMPEDWKGWPLRKDYVQPDFYEMQDAY 173
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_PROM3 (NAD(P)H-quinone oxidoreductase subunit J OS=Prochlorococcus marinus (strain MIT 9303) GN=ndhJ PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.043e-30 Identity = 68/169 (40.24%), Postives = 99/169 (58.58%), Query Frame = 2 Query: 329 GRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRI-----EYGVDQPE-------EVCIKVFAPRSN-PKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796 G +S WL K G H+ L D+ G+E + ++ + L G++YL+ Q YD PG L YHL + + GV EV +KVF R + P +PS++ +++ A++QERE++DM GI ++ HP R+LMPE W GWPLRKDY+ P+FYE+QDAY Sbjct: 17 GPISRWLNKQGFEHQLLDPDHLGVEVIGVESMFLQVIVAALKADGFDYLQCQGGYDEGPGQQLVCFYHLVAMAEMVAKMGVGDSSSEAAKVREVRLKVFLSREDTPSLPSIYGLFRGADWQERETFDMFGINFEGHPHPKRLLMPEDWKGWPLRKDYVQPDFYEMQDAY 185
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_PROM1 (NAD(P)H-quinone oxidoreductase subunit J OS=Prochlorococcus marinus (strain NATL1A) GN=ndhJ PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.043e-30 Identity = 69/163 (42.33%), Postives = 101/163 (61.96%), Query Frame = 2 Query: 317 KKMQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRI-EYGVD-QPEEVCIKVFAPRSNP-KIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796 +K+ G +S WL G + L D+ GIE ++I P + S+ L G+NYL+ Q YD PG + Y+L + E D P EV +KVF R+ +PS++ +++ A++QERE++DM G+ + HP R+LMPE W GWPLRKDY+ P+FYE+QDAY Sbjct: 11 EKISGPISDWLSNKGFENIPLKEDHLGIEVIKISPNNLLSIVEALKNDGFNYLQCQGGYDEGPGLNIVCFYNLIEMNELKEDISPREVRLKVFLDRNGDLTVPSLYSLFRGADWQERETFDMYGVNFKGHPHPKRLLMPEDWKGWPLRKDYVQPDFYEMQDAY 173
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_SYNS3 (NAD(P)H-quinone oxidoreductase subunit J OS=Synechococcus sp. (strain CC9311) GN=ndhJ PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.668e-30 Identity = 66/161 (40.99%), Postives = 96/161 (59.63%), Query Frame = 2 Query: 329 GRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTR----IEYGVDQPEEVCIKVFAPRSN-PKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796 G +S WL + G H +L D+ G+E + ++ + L G++YL+ Q YD PG L YH I+ D EV +KVF R P +PS++ +++ A++QERE++DM GI ++ HP R+LMPE W GWPLRKDY+ P+FYE+QDAY Sbjct: 23 GPVSQWLNQQGFDHDALEPDHLGVEQIGVEALFLQVITAALKSNGFDYLQCQGGYDEGPGERLVCFYHFVAMAELIDGKRDNLREVRLKVFLSREGEPSLPSIYGLFRGADWQERETFDMFGIHFEGHPHPKRLLMPEDWTGWPLRKDYVQPDFYEMQDAY 183
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_PROMM (NAD(P)H-quinone oxidoreductase subunit J OS=Prochlorococcus marinus (strain MIT 9313) GN=ndhJ PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.762e-30 Identity = 67/169 (39.64%), Postives = 99/169 (58.58%), Query Frame = 2 Query: 329 GRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRI-----EYGVDQPE-------EVCIKVFAPRSN-PKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796 G +S WL + G H+ L D+ G+E + ++ + L G++YL+ Q YD PG L YHL + + GV EV +KVF R + P +PS++ +++ A++QERE++DM GI ++ HP R+LMPE W GWPLRKDY+ P+FYE+QDAY Sbjct: 17 GPVSRWLNQQGFEHQLLDPDHLGVEVIGVESMFLQVIVAALKADGFDYLQCQGGYDEGPGQQLVCFYHLVAMAEMVAKMGVGDSSSEAAKVREVRLKVFLSREDIPSLPSIYGLFRGADWQERETFDMFGINFEGHPHPKRLLMPEDWKGWPLRKDYVQPDFYEMQDAY 185
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_SYNS9 (NAD(P)H-quinone oxidoreductase subunit J OS=Synechococcus sp. (strain CC9902) GN=ndhJ PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.121e-28 Identity = 63/165 (38.18%), Postives = 96/165 (58.18%), Query Frame = 2 Query: 329 GRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVD--------QPEEVCIKVFAPRSN-PKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796 G +S WL G H L D+ G+E + ++ + + +G++YL+ Q YD PG L YH + V+ + EV +KVF R P +PS++ +++ A++QERE++DM GI ++ HP R+LMPE W GWPLRKDY+ P+FYE+QDA+ Sbjct: 29 GPVSQWLNTQGFDHDVLDPDHVGVEQIGVESAVLPIIVAAIKSHGFDYLQCQGGYDEGPGERLVCFYHFIAMAEQVEAMTAGRPHELREVRLKVFLSREGTPSLPSIYGLFRGADWQERETFDMYGIEFEGHPHPKRLLMPEDWKGWPLRKDYVQPDFYEMQDAF 193
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHK_VITVI (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Vitis vinifera GN=ndhK PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 3.492e-22 Identity = 54/67 (80.60%), Postives = 57/67 (85.07%), Query Frame = 3 Query: 3 IYEDRIRLQRENRSFTFTTNHKFRVVCSTNTGNYDQGLLYQPPSTSEIPPETFFKYKSSVSSPEFIN 203 IYEDRIR Q+ENR FT TNHKF V ST+TGNYDQ LLYQ PSTSEIP ETFFKYKSSVSSPEF+N Sbjct: 161 IYEDRIRSQQENRCFT--TNHKFHVGRSTHTGNYDQRLLYQSPSTSEIPLETFFKYKSSVSSPEFVN 225
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHK_HELAN (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Helianthus annuus GN=ndhK PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.733e-21 Identity = 52/67 (77.61%), Postives = 55/67 (82.09%), Query Frame = 3 Query: 3 IYEDRIRLQRENRSFTFTTNHKFRVVCSTNTGNYDQGLLYQPPSTSEIPPETFFKYKSSVSSPEFIN 203 IY DRI QRENR FT TNHKF+V S +TGNYDQG LYQPPSTSEIPPETFFKYKSSVSS E +N Sbjct: 161 IYPDRIMSQRENRCFT--TNHKFQVGHSIHTGNYDQGFLYQPPSTSEIPPETFFKYKSSVSSHELVN 225 The following BLAST results are available for this feature:
BLAST of CX069464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 368
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069464 ID=CX069464; Name=CX069464; organism=Citrus sinensis; type=EST; length=800bpback to top |