CX069464

Overview
NameCX069464
Unique NameCX069464
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_NICTO (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Nicotiana tomentosiformis GN=ndhJ PE=3 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 2.222e-85
Identity = 145/158 (91.77%), Postives = 151/158 (95.57%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQGRLSAWLVKHGL+HRSLGFDYQGIETLQIKPEDWHS+AVI Y+YGYNYLRSQCAYDVAPGGLLASVYHLTRIE GVDQPEEVCIKVFA R NP+IPSVFWVWKS +FQERESYDMLGI YDNHPRL RILMPESWIGWPLRKDYIAPNFYEIQDA+
Sbjct:    1 MQGRLSAWLVKHGLIHRSLGFDYQGIETLQIKPEDWHSIAVIFYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEDGVDQPEEVCIKVFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_NICSY (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Nicotiana sylvestris GN=ndhJ PE=3 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 2.222e-85
Identity = 145/158 (91.77%), Postives = 151/158 (95.57%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQGRLSAWLVKHGL+HRSLGFDYQGIETLQIKPEDWHS+AVI Y+YGYNYLRSQCAYDVAPGGLLASVYHLTRIE GVDQPEEVCIKVFA R NP+IPSVFWVWKS +FQERESYDMLGI YDNHPRL RILMPESWIGWPLRKDYIAPNFYEIQDA+
Sbjct:    1 MQGRLSAWLVKHGLIHRSLGFDYQGIETLQIKPEDWHSIAVIFYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEDGVDQPEEVCIKVFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_HELAN (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Helianthus annuus GN=ndhJ PE=3 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 2.222e-85
Identity = 144/158 (91.14%), Postives = 151/158 (95.57%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQG LSAWLVKH L+HRSLGFDYQGIETLQIKP DWHS+AVILY+YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPR +P+IPSVFWVWKS +FQERESYDMLGI YDNHPRL RILMPESWIGWPLRKDYIAPNFYEIQDA+
Sbjct:    1 MQGNLSAWLVKHALIHRSLGFDYQGIETLQIKPGDWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRKDPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_ATRBE (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Atropa belladonna GN=ndhJ PE=3 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 2.222e-85
Identity = 145/158 (91.77%), Postives = 151/158 (95.57%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQGRLSAWLVKHGL+HRSLGFDYQGIETLQIKPEDWHS+AVI Y+YGYNYLRSQCAYDVAPGGLLASVYHLTRIE GVDQPEEVCIKVFA R NP+IPSVFWVWKS +FQERESYDMLGI YDNHPRL RILMPESWIGWPLRKDYIAPNFYEIQDA+
Sbjct:    1 MQGRLSAWLVKHGLIHRSLGFDYQGIETLQIKPEDWHSIAVIFYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEDGVDQPEEVCIKVFASRRNPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_GUIAB (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Guizotia abyssinica GN=ndhJ PE=3 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.902e-85
Identity = 144/158 (91.14%), Postives = 151/158 (95.57%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQG LSAWLVKH L+HRSLGFDYQGIETLQIKP DWHS+AVILY+YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPR +P+IPSVFWVWKS +FQERESYDMLGI YDNHPRL RILMPESWIGWPLRKDYIAPNFYEIQDA+
Sbjct:    1 MQGNLSAWLVKHALIHRSLGFDYQGIETLQIKPGDWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRRDPRIPSVFWVWKSVDFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_DRIGR (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Drimys granadensis GN=ndhJ PE=3 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.902e-85
Identity = 144/158 (91.14%), Postives = 153/158 (96.84%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQGRLSAWLVKH LVHRSLGFDYQGIETLQIKPEDW+S+AVI Y+YGYNYLRSQCAYDVAPGGLLASVYHLTRI+YGVDQPEEVCIKVFAPR NP+IPSVFW+WKSA+FQERESYDMLGI Y+NHPRL RILMPESWIGWPLRKDYIAPNFYEIQDA+
Sbjct:    1 MQGRLSAWLVKHELVHRSLGFDYQGIETLQIKPEDWYSIAVISYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEVCIKVFAPRRNPRIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_CUCSA (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis sativus GN=ndhJ PE=3 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.902e-85
Identity = 143/158 (90.51%), Postives = 152/158 (96.20%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQG LS+WLVKHGLVHRSLGFDYQGIETLQIKPE+WHS+AVILY+YGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEEVCIKVFA R NP+IPSVFWVWKSA+F ERESYDMLGI YDNHPRL RILMPESW+GWPLRKDYIAPNFYEIQDA+
Sbjct:    1 MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFPERESYDMLGIYYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH 158
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_NYMAL (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Nymphaea alba GN=ndhJ PE=3 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 3.790e-85
Identity = 142/158 (89.87%), Postives = 152/158 (96.20%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQGR SAWLVKH LVHRSLGFDYQG+ETLQIKPEDW+S+AVI Y+YGYNYLRSQCAYDVAPGGLLASVYHLTRI+YGVDQPEEVCIKVF PRSNP+IPSVFW+WKSA+FQERESYDMLGI YDNHPR+ RILMPESWIGWPLRKDYIAPNFYE+QDAY
Sbjct:    1 MQGRSSAWLVKHELVHRSLGFDYQGVETLQIKPEDWYSIAVISYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIQYGVDQPEEVCIKVFVPRSNPRIPSVFWIWKSADFQERESYDMLGISYDNHPRMKRILMPESWIGWPLRKDYIAPNFYELQDAY 158
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_LIRTU (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Liriodendron tulipifera GN=ndhJ PE=3 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 3.790e-85
Identity = 144/158 (91.14%), Postives = 152/158 (96.20%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQGR SAWLVKH LVHRSLGFDYQGIETLQIKPEDW+S+AVI Y+YGYNYLRSQCAYDVAPGGLLASVYHLT+IEYGVDQPEEVCIKVFAPR NP+IPSVFW+WKSA+FQERESYDMLGI Y+NHPRL RILMPESWIGWPLRKDYIAPNFYEIQDAY
Sbjct:    1 MQGRSSAWLVKHELVHRSLGFDYQGIETLQIKPEDWYSIAVISYVYGYNYLRSQCAYDVAPGGLLASVYHLTKIEYGVDQPEEVCIKVFAPRRNPRIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAY 158
[Close]
BLAST of CX069464 vs. ExPASy Swiss-Prot
Match: NDHJ_CALFG (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Calycanthus floridus var. glaucus GN=ndhJ PE=3 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 3.790e-85
Identity = 144/158 (91.14%), Postives = 153/158 (96.84%), Query Frame = 2 
Query:  323 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWHSVAVILYIYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVDQPEEVCIKVFAPRSNPKIPSVFWVWKSANFQERESYDMLGILYDNHPRLXRILMPESWIGWPLRKDYIAPNFYEIQDAY 796
            MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDW+S+AVI Y+YGYNYLR QCAYDVAPGGLLASVY+LTRI+YGVDQPEEVCIKVFAPR NPKIPSVFW+WKSA+FQERESYDMLGI Y+NHPRL RILMPESWIGWPLRKDYIAPNFYEIQDA+
Sbjct:    1 MQGRLSAWLVKHGLVHRSLGFDYQGIETLQIKPEDWYSIAVISYVYGYNYLRFQCAYDVAPGGLLASVYYLTRIQYGVDQPEEVCIKVFAPRRNPKIPSVFWIWKSADFQERESYDMLGISYENHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAH 158
The following BLAST results are available for this feature:
BLAST of CX069464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
NDHJ_NICTO2.222e-8591.77NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]
NDHJ_NICSY2.222e-8591.77NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]
NDHJ_HELAN2.222e-8591.14NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]
NDHJ_ATRBE2.222e-8591.77NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]
NDHJ_GUIAB2.902e-8591.14NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]
NDHJ_DRIGR2.902e-8591.14NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]
NDHJ_CUCSA2.902e-8590.51NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]
NDHJ_NYMAL3.790e-8589.87NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]
NDHJ_LIRTU3.790e-8591.14NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]
NDHJ_CALFG3.790e-8591.14NAD(P)H-quinone oxidoreductase subunit J, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10F04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10F04-K8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069464 ID=CX069464; Name=CX069464; organism=Citrus sinensis; type=EST; length=800bp
AAATCTATGAAGATCGAATTCGATTGCAACGGGAGAATCGCTCGTTTACT
TTTACTACCAATCACAAGTTTCGTGTTGTATGCAGTACTAATACTGGAAA
TTATGATCAAGGATTACTTTATCAACCACCATCTACGTCAGAAATCCCGC
CTGAAACCTTTTTCAAATACAAAAGTTCAGTATCTTCCCCCGAATTCATT
AATTAGGCAGGAGGATTCATTTGTACAGAATAAGAAAGAGCGAATTAATC
TTCATAAATTCCAAAAATTCATCGTAAATGTGAAATATTTATCGAAATCA
AAATGTGGGAGAGATAAAAAAGATGCAGGGTCGTTTGTCTGCTTGGCTGG
TCAAGCATGGGCTAGTTCATAGATCTTTGGGCTTTGATTACCAAGGAATA
GAAACTTTACAAATAAAGCCCGAGGATTGGCACTCCGTTGCTGTCATTTT
GTATATATATGGCTACAATTATCTACGGTCCCAATGTGCCTATGATGTAG
CACCGGGCGGACTGTTAGCCAGTGTGTATCATCTTACGCGAATAGAGTAT
GGTGTAGATCAACCAGAAGAGGTATGCATAAAAGTATTTGCTCCAAGGAG
TAATCCTAAAATTCCATCGGTTTTCTGGGTTTGGAAAAGTGCGAATTTTC
AAGAACGGGAATCTTATGATATGCTGGGAATCCTTTATGATAATCATCCA
CGACTGANACGTATCTTAATGCCTGAAAGTTGGATAGGGTGGCCCTTACG
TAAGGATTATATTGCCCCCAATTTTTATGAAATACAAGATGCTTATTGAA
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