CX069450

Overview
NameCX069450
Unique NameCX069450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: DYRK4_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Mus musculus GN=Dyrk4 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.400e-15
Identity = 48/125 (38.40%), Postives = 61/125 (48.80%), Query Frame = 3
Query:    3 IHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQH 377
            IH DLKPEN++L     + V                         KVIDFGS+ YE       + +R YR+PEVILG  +    D+WS+GCI+ EL TG  LF     +E LA +  VLG  P H
Sbjct:  342 IHCDLKPENIVLYQRGQVTV-------------------------KVIDFGSSCYEHQKVYTYIQSRFYRSPEVILGHPYNMAIDMWSLGCIMAELYTGYPLFPGENEVEQLACIMEVLGLPPAH 441          
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: MBK2_CAEEL (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 OS=Caenorhabditis elegans GN=mbk-2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.203e-14
Identity = 54/140 (38.57%), Postives = 68/140 (48.57%), Query Frame = 3
Query:    3 IHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHML---KRVE*VIFSK 413
            IH DLKPENVLL                         +    S IKVIDFGS+ ++       + +R YRAPEVILG  +  P D+WS+GCIL EL TG  L    +  + LA++  +LG  P   L   KR    I SK
Sbjct:  584 IHCDLKPENVLL-------------------------KQQGRSGIKVIDFGSSCFDDQRIYTYIQSRFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLETAKRARTFITSK 698          
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: MBK2_CAEBR (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 OS=Caenorhabditis briggsae GN=mbk-2 PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.203e-14
Identity = 54/140 (38.57%), Postives = 68/140 (48.57%), Query Frame = 3
Query:    3 IHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHML---KRVE*VIFSK 413
            IH DLKPENVLL                         +    S IKVIDFGS+ ++       + +R YRAPEVILG  +  P D+WS+GCIL EL TG  L    +  + LA++  +LG  P   L   KR    I SK
Sbjct:  583 IHCDLKPENVLL-------------------------KQQGRSGIKVIDFGSSCFDDQRIYTYIQSRFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLETAKRARTFITSK 697          
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: DYRK3_DROME (Putative dual specificity tyrosine-phosphorylation-regulated kinase 3 homolog OS=Drosophila melanogaster GN=Dyrk3 PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 5.971e-14
Identity = 48/120 (40.00%), Postives = 60/120 (50.00%), Query Frame = 3
Query:    3 IHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 362
            IH D+KPENVLL                         +    S IKVIDFGS+ +E       + +R YRAPEVILG  +    D+WS+GCIL EL +G ALF      + LA +  VLG
Sbjct:  399 IHCDMKPENVLL-------------------------KQQGRSGIKVIDFGSSCFENQRIYTYIQSRFYRAPEVILGGKYGRAIDMWSLGCILAELLSGHALFPGENESDQLACIIEVLG 493          
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: PPK15_SCHPO (Serine/threonine-protein kinase ppk15 OS=Schizosaccharomyces pombe GN=ppk15 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.798e-14
Identity = 50/128 (39.06%), Postives = 64/128 (50.00%), Query Frame = 3
Query:    3 IHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLK 386
            IH DLKPEN+LL                  +D S       S  +KVIDFGS  +ER      + +R YR+PEVILGL +    D+WS+GCIL EL  G  LF  +     L  +  +LG  P  ML+
Sbjct:  254 IHCDLKPENILL------------------QDLS-------SPIVKVIDFGSACHERQTVYTYIQSRFYRSPEVILGLHYNCGIDMWSLGCILAELFLGLPLFPGNSEYNQLCRIVDMLGNPPTWMLE 356          
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: DYRK4_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 4 OS=Homo sapiens GN=DYRK4 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 7.798e-14
Identity = 46/123 (37.40%), Postives = 60/123 (48.78%), Query Frame = 3
Query:    3 IHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLP 371
            IH DLKPEN++L                              +++KVIDFGS+ YE       + +R YR+PEVILG  +    D+WS+GCI  EL TG  LF     +E LA +  VLG  P
Sbjct:  227 IHCDLKPENIVLYQKG-------------------------QASVKVIDFGSSCYEHQKVYTYIQSRFYRSPEVILGHPYDVAIDMWSLGCITAELYTGYPLFPGENEVEQLACIMEVLGLPP 324          
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: CDKL5_MOUSE (Cyclin-dependent kinase-like 5 OS=Mus musculus GN=Cdkl5 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 43/130 (33.08%), Postives = 66/130 (50.77%), Query Frame = 3
Query:    3 IHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI--VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLK 386
            +H D+KPEN+L+  ++ +K+ D+                          F     E  + NY   V+TR YR+PE++LG  +    D+WSVGCIL EL  G+ LF     ++ L  +++VLGPLP   +K
Sbjct:  132 VHRDIKPENLLISHNDVLKLCDF-------------------------GFARNLSEGNNANYTEYVATRWYRSPELLLGAPYGKSVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPSEQMK 236          
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: CDKL5_HUMAN (Cyclin-dependent kinase-like 5 OS=Homo sapiens GN=CDKL5 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 43/130 (33.08%), Postives = 66/130 (50.77%), Query Frame = 3
Query:    3 IHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI--VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLK 386
            +H D+KPEN+L+  ++ +K+ D+                          F     E  + NY   V+TR YR+PE++LG  +    D+WSVGCIL EL  G+ LF     ++ L  +++VLGPLP   +K
Sbjct:  132 VHRDIKPENLLISHNDVLKLCDF-------------------------GFARNLSEGNNANYTEYVATRWYRSPELLLGAPYGKSVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPSEQMK 236          
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: YAKA_DICDI (Probable serine/threonine-protein kinase yakA OS=Dictyostelium discoideum GN=yakA PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.870e-13
Identity = 43/129 (33.33%), Postives = 62/129 (48.06%), Query Frame = 3
Query:    3 IHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKR 389
            IH DLKPEN+LL +                           S AIK+IDFGS  YE+      + +RHYR+PEV++G  +    D+WS+GCI  EL  G  LF  +     ++ +  + G  P  +L +
Sbjct:  329 IHCDLKPENILLQNVN-------------------------SPAIKIIDFGSACYEKSTLYTYIQSRHYRSPEVLVGTVYCASIDMWSLGCISAELFLGLPLFPGNSEYNQISRIVEMRGIFPSDLLDK 432          
BLAST of CX069450 vs. ExPASy Swiss-Prot
Match: YL205_MIMIV (Putative serine/threonine-protein kinase L205 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L205 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.533e-12
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 3
Query:  147 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ------THENLEHLAMMERVLGPLPQHMLKR 389
            DFG++ +        +  R YRAPEVIL L +T+ CDIWSV C+  EL TG  LF        + +L HL ++E+++G +P  M K+
Sbjct:  380 DFGNSYFFDKRTRNEIQDRRYRAPEVILDLNYTFCCDIWSVACVAYELATGYVLFDPFGEHFLNRDLHHLFLIEKIVGEIPLAMKKK 466          
The following BLAST results are available for this feature:
BLAST of CX069450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
DYRK4_MOUSE5.400e-1538.40Dual specificity tyrosine-phosphorylation-regulate... [more]
MBK2_CAEEL1.203e-1438.57Dual specificity tyrosine-phosphorylation-regulate... [more]
MBK2_CAEBR1.203e-1438.57Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_DROME5.971e-1440.00Putative dual specificity tyrosine-phosphorylation... [more]
PPK15_SCHPO7.798e-1439.06Serine/threonine-protein kinase ppk15 OS=Schizosac... [more]
DYRK4_HUMAN7.798e-1437.40Dual specificity tyrosine-phosphorylation-regulate... [more]
CDKL5_MOUSE2.269e-1333.08Cyclin-dependent kinase-like 5 OS=Mus musculus GN=... [more]
CDKL5_HUMAN2.269e-1333.08Cyclin-dependent kinase-like 5 OS=Homo sapiens GN=... [more]
YAKA_DICDI3.870e-1333.33Probable serine/threonine-protein kinase yakA OS=D... [more]
YL205_MIMIV9.533e-1240.23Putative serine/threonine-protein kinase L205 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10E05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10E05-I10-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069450 ID=CX069450; Name=CX069450; organism=Citrus sinensis; type=EST; length=802bp
TGATACATACTGACTTAAAGCCTGAGAACGTTCTACTTGTTTCTTCCGAG
TATATTAAGGTTCCTGACTACAAGAGTTCTTCGCACACACCAAAAGATTC
TTCCTACTTTAAAAGAATGCCAAAGTCAAGTGCTATTAAGGTGATTGATT
TTGGCAGCACAACTTATGAGCGCCCAGATCAGAACTACATTGTATCCACC
CGACATTATCGTGCGCCGGAGGTCATCCTTGGACTTGGGTGGACTTACCC
ATGTGATATATGGAGTGTTGGTTGTATCTTAGTGGAGTTATGCACGGGTG
AGGCATTATTCCAAACTCATGAGAACTTGGAGCACCTTGCGATGATGGAA
CGGGTGCTTGGTCCCTTGCCTCAACATATGCTGAAGAGAGTAGAGTGAGT
GATCTTCTCCAAAGTTTTTTAAGTGCTCACTGATCTCAACCCACTGATAG
TATTTATCGCCATGAATTTTCTCAGCCGACATGCAGAGAAGTATGTTAGA
AGGGGTAGGTTGGACTGGCCAGAAGGTGCAGCCTCTAGGGAAAGTATTAA
ATCTGTGATGAAGCTACCTCGTCTTCAGGTTCCTTTTTTTTTATGGTTCT
TTTGTGGAATTTAAGGGTTATTGTCTTGCTTTTAGGTGTACTGACTGCAT
TGCCTCATTTTGCCAGAACCTAATAATGCAGCACGTTGACCATTCAGCTG
GTGATCTTACACATTTATTGCAAGGACTGCTTAGGTATGATCCTACGGAC
AGGCTAACTGCGCGTGAAGCTCTTAGGCATCCCTTTTTTACCAGAGATCA
GC
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