DR403842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403842 vs. ExPASy Swiss-Prot
Match: PSBK_NYMAL (Photosystem II reaction center protein K OS=Nymphaea alba GN=psbK PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 5.359e-16 Identity = 43/61 (70.49%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 202 MLNIFSLMYICLNSAPYSSSFLFAKLPEAYAFLNPIVDVMPVIPXXXXXXXXXWQAAVSFR 384 M NIFSL+ ICLNSA S F FAKLPEAYAFLNPIVD MPVIP WQAAVSFR Sbjct: 1 MPNIFSLICICLNSALQPSGFFFAKLPEAYAFLNPIVDFMPVIPVLFFLLAFVWQAAVSFR 61
BLAST of DR403842 vs. ExPASy Swiss-Prot
Match: PSBK_PIPCE (Photosystem II reaction center protein K OS=Piper cenocladum GN=psbK PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.194e-15 Identity = 44/61 (72.13%), Postives = 46/61 (75.41%), Query Frame = 1 Query: 202 MLNIFSLMYICLNSAPYSSSFLFAKLPEAYAFLNPIVDVMPVIPXXXXXXXXXWQAAVSFR 384 MLNIFSL ICL+SA +SSSF FAKLPEAYA NPIVDVMPVIP WQAAVSFR Sbjct: 1 MLNIFSL--ICLSSALHSSSFFFAKLPEAYALFNPIVDVMPVIPVLFFLLALVWQAAVSFR 59
BLAST of DR403842 vs. ExPASy Swiss-Prot
Match: PSBK_ARATH (Photosystem II reaction center protein K OS=Arabidopsis thaliana GN=psbK PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.194e-15 Identity = 42/61 (68.85%), Postives = 46/61 (75.41%), Query Frame = 1 Query: 202 MLNIFSLMYICLNSAPYSSSFLFAKLPEAYAFLNPIVDVMPVIPXXXXXXXXXWQAAVSFR 384 MLNIF+L+ I NS +SS+FL AKLPEAYAFLNPIVDVMPVIP WQAAVSFR Sbjct: 1 MLNIFNLICIFFNSTLFSSTFLVAKLPEAYAFLNPIVDVMPVIPLFFLLLAFVWQAAVSFR 61
BLAST of DR403842 vs. ExPASy Swiss-Prot
Match: PSBK_LOTJA (Photosystem II reaction center protein K OS=Lotus japonicus GN=psbK PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.659e-15 Identity = 40/61 (65.57%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 202 MLNIFSLMYICLNSAPYSSSFLFAKLPEAYAFLNPIVDVMPVIPXXXXXXXXXWQAAVSFR 384 M+NI SL+ I +NS PYSS F KLPEAYAFLNPIVD+MPVIP WQAAVSFR Sbjct: 1 MINIVSLVCIYINSVPYSSIFFLDKLPEAYAFLNPIVDIMPVIPLFFFLLAFVWQAAVSFR 61
BLAST of DR403842 vs. ExPASy Swiss-Prot
Match: PSBK_AMBTC (Photosystem II reaction center protein K OS=Amborella trichopoda GN=psbK PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.473e-15 Identity = 41/61 (67.21%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 202 MLNIFSLMYICLNSAPYSSSFLFAKLPEAYAFLNPIVDVMPVIPXXXXXXXXXWQAAVSFR 384 M NIFSL+ ICL+SA +SS F FAKLPEAYA NPIVDVMPVIP WQAA SFR Sbjct: 1 MPNIFSLICICLHSALHSSGFFFAKLPEAYAVFNPIVDVMPVIPLFFFLLAFVWQAAASFR 61
BLAST of DR403842 vs. ExPASy Swiss-Prot
Match: PSBK_SILLA (Photosystem II reaction center protein K OS=Silene latifolia GN=psbK PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.724e-14 Identity = 44/61 (72.13%), Postives = 45/61 (73.77%), Query Frame = 1 Query: 202 MLNIFSLMYICLNSAPYSSSFLFAKLPEAYAFLNPIVDVMPVIPXXXXXXXXXWQAAVSFR 384 MLNIFSL I LNSA YSSS FAKLPEAYAFL+PIVD MPVIP WQAAVSFR Sbjct: 1 MLNIFSL--IGLNSALYSSSCFFAKLPEAYAFLSPIVDFMPVIPLLFFLLAFVWQAAVSFR 59
BLAST of DR403842 vs. ExPASy Swiss-Prot
Match: PSBK_SECCE (Photosystem II reaction center protein K OS=Secale cereale GN=psbK PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.724e-14 Identity = 39/61 (63.93%), Postives = 41/61 (67.21%), Query Frame = 1 Query: 202 MLNIFSLMYICLNSAPYSSSFLFAKLPEAYAFLNPIVDVMPVIPXXXXXXXXXWQAAVSFR 384 M NI SL IC NS Y +SF FAKLPEAYA NPIVD+MPVIP WQAAVSFR Sbjct: 1 MPNILSLTCICFNSVLYPTSFFFAKLPEAYAIFNPIVDIMPVIPLFFFLLAFVWQAAVSFR 61
BLAST of DR403842 vs. ExPASy Swiss-Prot
Match: PSBK_HORVU (Photosystem II reaction center protein K OS=Hordeum vulgare GN=psbK PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.724e-14 Identity = 39/61 (63.93%), Postives = 41/61 (67.21%), Query Frame = 1 Query: 202 MLNIFSLMYICLNSAPYSSSFLFAKLPEAYAFLNPIVDVMPVIPXXXXXXXXXWQAAVSFR 384 M NI SL IC NS Y +SF FAKLPEAYA NPIVD+MPVIP WQAAVSFR Sbjct: 1 MPNILSLTCICFNSVLYPTSFFFAKLPEAYAIFNPIVDIMPVIPLFFFLLAFVWQAAVSFR 61
BLAST of DR403842 vs. ExPASy Swiss-Prot
Match: PSBK_WHEAT (Photosystem II reaction center protein K OS=Triticum aestivum GN=psbK PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.016e-14 Identity = 39/61 (63.93%), Postives = 40/61 (65.57%), Query Frame = 1 Query: 202 MLNIFSLMYICLNSAPYSSSFLFAKLPEAYAFLNPIVDVMPVIPXXXXXXXXXWQAAVSFR 384 M NI SL IC NS Y +SF FAKLPEAYA NPIVD MPVIP WQAAVSFR Sbjct: 1 MPNILSLTCICFNSVIYPTSFFFAKLPEAYAIFNPIVDFMPVIPLFFFLLAFVWQAAVSFR 61
BLAST of DR403842 vs. ExPASy Swiss-Prot
Match: PSBK_ORYSJ (Photosystem II reaction center protein K OS=Oryza sativa subsp. japonica GN=psbK PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.016e-14 Identity = 39/61 (63.93%), Postives = 40/61 (65.57%), Query Frame = 1 Query: 202 MLNIFSLMYICLNSAPYSSSFLFAKLPEAYAFLNPIVDVMPVIPXXXXXXXXXWQAAVSFR 384 M NI SL IC NS Y +SF FAKLPEAYA NPIVD MPVIP WQAAVSFR Sbjct: 1 MPNILSLTCICFNSVIYPTSFFFAKLPEAYAIFNPIVDFMPVIPVLFFLLAFVWQAAVSFR 61 The following BLAST results are available for this feature:
BLAST of DR403842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403842 ID=DR403842; Name=DR403842; organism=Citrus sinensis; type=EST; length=445bpback to top |