CX069436

Overview
NameCX069436
Unique NameCX069436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACT_COLSC (Actin OS=Coleochaete scutata PE=2 SV=1)

HSP 1 Score: 381.719 bits (979), Expect = 3.130e-105
Identity = 186/204 (91.18%), Postives = 201/204 (98.53%), Query Frame = -1 
Query:  302 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 913
            PHAILRLDLAGRDLTD +MKILTERGY+FTTTAEREIVRD+KEKLAY+ALD+EQE++TA+ SS++EKSYELPDGQVITIG+ERFRCPEVLF P++IGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF
Sbjct:  174 PHAILRLDLAGRDLTDYMMKILTERGYAFTTTAEREIVRDIKEKLAYVALDFEQEMQTAQNSSSLEKSYELPDGQVITIGSERFRCPEVLFNPALIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 377
[Close]
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACT6_SOLTU (Actin-71 OS=Solanum tuberosum GN=AC71 PE=3 SV=2)

HSP 1 Score: 380.563 bits (976), Expect = 6.973e-105
Identity = 187/204 (91.67%), Postives = 199/204 (97.55%), Query Frame = -1 
Query:  302 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 913
            PHAILRLDLAGRDLT+ ++KILTERGYSFTTTAE+EIVRD+KEKLAY+ALD+EQELET KT SAVEK+YELPDGQVITIGAERFRCPEVL+QPS+IGME+AGIHETTYNSIMKCDVDIRKDLYGN VLSGGSTMFPGIADRMSKEI ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  174 PHAILRLDLAGRDLTEYMVKILTERGYSFTTTAEKEIVRDVKEKLAYLALDFEQELETTKTGSAVEKNYELPDGQVITIGAERFRCPEVLYQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNHVLSGGSTMFPGIADRMSKEIQALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACT3_SOYBN (Actin-3 OS=Glycine max GN=SAC3 PE=3 SV=2)

HSP 1 Score: 380.178 bits (975), Expect = 9.107e-105
Identity = 189/204 (92.65%), Postives = 199/204 (97.55%), Query Frame = -1 
Query:  302 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 913
            PHAILRLDLAGRDLTD LMKILTERGY FTT+AEREIVRDMKEKLAY+ALDYEQELETAK+SS+VEKS+ELPDGQVITIGAERFRCP++LFQPSMI ME+AGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMF GIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  173 PHAILRLDLAGRDLTDHLMKILTERGYMFTTSAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKSHELPDGQVITIGAERFRCPKILFQPSMIEMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFLGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 376
[Close]
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACT1_SORBI (Actin-1 OS=Sorghum bicolor GN=AC1 PE=2 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 3.461e-104
Identity = 188/204 (92.16%), Postives = 196/204 (96.08%), Query Frame = -1 
Query:  302 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 913
            PHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDMKEKLAYIALDY+QE+ETAKTSS+VEKSYELPDGQVITI A+RFRCPEVLFQPS IGME+AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRM +    LAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+EYDESGPSIVHRKCF
Sbjct:  174 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYDQEMETAKTSSSVEKSYELPDGQVITIAADRFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMRQGNHCLAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
[Close]
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACT7_ORYSJ (Actin-7 OS=Oryza sativa subsp. japonica GN=ACT7 PE=3 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 5.903e-104
Identity = 184/204 (90.20%), Postives = 196/204 (96.08%), Query Frame = -1 
Query:  302 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 913
            PHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKLAY+ALDYEQEL+TA++SS++EKSYELPDGQVITIGAERFRCPEVLFQPS IGME+ GIHE TYNSIMKCDVDIRKDLYGN+VLSGGSTMFPGI DRMSKEI+ALAP SMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K+EYDESGP IVH KCF
Sbjct:  173 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQELDTARSSSSIEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAPGIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIGDRMSKEITALAPGSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPGIVHMKCF 376
[Close]
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACT7_ORYSI (Actin-7 OS=Oryza sativa subsp. indica GN=ACT7 PE=3 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 5.903e-104
Identity = 184/204 (90.20%), Postives = 196/204 (96.08%), Query Frame = -1 
Query:  302 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 913
            PHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKLAY+ALDYEQEL+TA++SS++EKSYELPDGQVITIGAERFRCPEVLFQPS IGME+ GIHE TYNSIMKCDVDIRKDLYGN+VLSGGSTMFPGI DRMSKEI+ALAP SMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K+EYDESGP IVH KCF
Sbjct:  173 PHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQELDTARSSSSIEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAPGIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIGDRMSKEITALAPGSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPGIVHMKCF 376
[Close]
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACT7_SOLTU (Actin-75 OS=Solanum tuberosum GN=AC75 PE=3 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 1.007e-103
Identity = 186/204 (91.18%), Postives = 199/204 (97.55%), Query Frame = -1 
Query:  302 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 913
            PHAILRLDLAGRDLT+ L KILTERGYSFTT+AE+EIVRDMKEKLAYIALD+EQEL+  K+SS+VEK++ELPDGQVITIGAERFRCPEVLFQPS IGME+AGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK+E+DESGPSIVHRKCF
Sbjct:  174 PHAILRLDLAGRDLTEHLAKILTERGYSFTTSAEKEIVRDMKEKLAYIALDFEQELDMVKSSSSVEKNFELPDGQVITIGAERFRCPEVLFQPSTIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEFDESGPSIVHRKCF 377
[Close]
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACT8_ARATH (Actin-8 OS=Arabidopsis thaliana GN=ACT8 PE=1 SV=2)

HSP 1 Score: 376.326 bits (965), Expect = 1.315e-103
Identity = 182/204 (89.22%), Postives = 199/204 (97.55%), Query Frame = -1 
Query:  302 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 913
            PHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL+++A+DYEQE+ET+KTSS++EK+YELPDGQVITIGAERFRCPEVLFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMF GIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K+EYDE+GP IVHRKCF
Sbjct:  174 PHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
[Close]
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACT2_ARATH (Actin-2 OS=Arabidopsis thaliana GN=ACT2 PE=1 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 1.315e-103
Identity = 182/204 (89.22%), Postives = 199/204 (97.55%), Query Frame = -1 
Query:  302 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 913
            PHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL+++A+DYEQE+ET+KTSS++EK+YELPDGQVITIGAERFRCPEVLFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMF GIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K+EYDE+GP IVHRKCF
Sbjct:  174 PHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
[Close]
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACT_MESVI (Actin OS=Mesostigma viride PE=3 SV=1)

HSP 1 Score: 375.941 bits (964), Expect = 1.718e-103
Identity = 186/204 (91.18%), Postives = 194/204 (95.10%), Query Frame = -1 
Query:  302 PHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 913
            PHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKLAY+A+DYE EL TA TSS++EKSYELPDGQVITIG ERFRCPEVLF P  +GMESAGIHETTYNSIM+CDVDIRKDLYGNIVLSGGSTM PGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQ MWIAKSEYDESGPSIVHRKCF
Sbjct:  174 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVAIDYEAELATANTSSSIEKSYELPDGQVITIGNERFRCPEVLFNPGYVGMESAGIHETTYNSIMRCDVDIRKDLYGNIVLSGGSTMXPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQAMWIAKSEYDESGPSIVHRKCF 377
The following BLAST results are available for this feature:
BLAST of CX069436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
ACT_COLSC3.130e-10591.18Actin OS=Coleochaete scutata PE=2 SV=1[more]
ACT6_SOLTU6.973e-10591.67Actin-71 OS=Solanum tuberosum GN=AC71 PE=3 SV=2[more]
ACT3_SOYBN9.107e-10592.65Actin-3 OS=Glycine max GN=SAC3 PE=3 SV=2[more]
ACT1_SORBI3.461e-10492.16Actin-1 OS=Sorghum bicolor GN=AC1 PE=2 SV=1[more]
ACT7_ORYSJ5.903e-10490.20Actin-7 OS=Oryza sativa subsp. japonica GN=ACT7 PE... [more]
ACT7_ORYSI5.903e-10490.20Actin-7 OS=Oryza sativa subsp. indica GN=ACT7 PE=3... [more]
ACT7_SOLTU1.007e-10391.18Actin-75 OS=Solanum tuberosum GN=AC75 PE=3 SV=1[more]
ACT8_ARATH1.315e-10389.22Actin-8 OS=Arabidopsis thaliana GN=ACT8 PE=1 SV=2[more]
ACT2_ARATH1.315e-10389.22Actin-2 OS=Arabidopsis thaliana GN=ACT2 PE=1 SV=1[more]
ACT_MESVI1.718e-10391.18Actin OS=Mesostigma viride PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10D10_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10D10-G20-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069436 ID=CX069436; Name=CX069436; organism=Citrus sinensis; type=EST; length=913bp
GGCGAATTGGGGTGACCGGGCCCCCCCNTTTTGGAATAAAAAGACAGAAT
TAACATTTCCCACAATATTGGGAGGGGTAACAATTTATCACTACTGAGAA
AAAGGGATAAAAATTTGGAAATAGTACAGCAACGATTATGTTCTTTCCAG
GTTGTTGTCCACACGTTGAAATGAAGAATGCCAAGAAAGGCAATAAAATG
AATGAAAATGCAAGCAGCATTTTGGTTTTAAAATAGAAAATGCAAGCAGC
ATTTTGGTTTTAAAATAGCACCATGCTCCAGTCCATATTTGCTCCTGATC
AGAAGCATTTCCTGTGCACTATTGAAGGGCCAGACTCATCATACTCAGAT
TTGGCAATCCACATTTGCTGGAAAGTGCTGAGGGATGCCAAAATGGATCC
TCCTATCCAGACACTATATTTCCTCTCGGGAGGAGCAACCACCTTAATCT
TCATGCTGCTTGGTGCTAATGCACTGATTTCTTTGCTCATTCTATCAGCA
ATACCAGGGAACATGGTGGAACCGCCACTAAGTACAATGTTCCCATACAG
ATCCTTCCTAATATCAACATCACATTTCATTATGGAGTTGTAAGTTGTTT
CATGAATACCAGCAGACTCCATACCGATCATTGATGGTTGGAAAAGGACT
TCTGGGCATCTAAAACGCTCAGCACCAATGGTGATCACCTGACCATCTGG
TAACTCATAGCTCTTTTCAACAGCAGAGCTGGTCTTGGCGGTTTCTAATT
CTTGTTCATAATCAAGGGCAATGTATGCCAATTTCTCCTTCATATCCCTC
ACAATTTCACGTTCGGCTGTGGTGGTAAATGAGTAGCCACGCTCAGTCAA
GATTTTCATCAAGGCATCAGTGAGATCACGACCGGCAAGGTCAAGACGCA
AGATTGCATGTGG
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