CX069436
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ACL6A_HUMAN (Actin-like protein 6A OS=Homo sapiens GN=ACTL6A PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.754e-31 Identity = 66/142 (46.48%), Postives = 91/142 (64.08%), Query Frame = -1 Query: 305 YELPDGQVITIGAERFRCPEVLFQPSMI----GMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVA---PPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKC 709 YE P+G GAER + PE LF PS + G G+ S+ CD+DIR LYG+++++GG+T+ DR+++E+S P SM++K++A ER++S WIGGSILASL TFQQMWI+K EY+E G V RKC Sbjct: 287 YEFPNGYNCDFGAERLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 428
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP7_ARATH (Actin-related protein 7 OS=Arabidopsis thaliana GN=ARP7 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.390e-28 Identity = 78/205 (38.05%), Postives = 110/205 (53.66%), Query Frame = -1 Query: 302 RLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPE------RKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 898 R +L G +LT + L + S + V +KE+ A A E E+ KT + + + LPDGQVI+IG ER+ E LFQPS++G+E GI E I + + L N VL GG+T G R KE + L S+++ +V PPE YS W+GG+ILA + Q + K++YDE+GPS+VHRKCF Sbjct: 165 RFELGGTELTKLFAQELGKTNPSMNLSMSD--VEKLKEQYANCA---EDEIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHVTKADYDETGPSVVHRKCF 363
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP6_ARATH (Actin-related protein 6 OS=Arabidopsis thaliana GN=ARP6 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.896e-28 Identity = 79/246 (32.11%), Postives = 119/246 (48.37%), Query Frame = -1 Query: 302 HAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKS-YELPDGQVITIGA------------------------------------------ERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 910 HAI R+DL G+ T+ L ++++ R S E +V D KEKL +++LD ++L A+ + + KS Y LPDG T G ERF PE LFQP+ +GM AG+ E +I C ++ LY +I+L+GGST+FP + +R+ E+ L P +K+ + VW GGS+LAS F+ M + K+EY+E G + R+ F Sbjct: 177 HAIKRIDLGGKAFTNYLKELVSYR--SINVMDETFLVDDAKEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPDGVTHTKGYVKDPQAAKRFLSLSEKESVVVMDKVGERKKADMNKNEIDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGSARCRRRFF 420
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP42_SCHPO (SWI/SNF and RSC complexes subunit arp42 OS=Schizosaccharomyces pombe GN=arp42 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.536e-27 Identity = 70/191 (36.65%), Postives = 102/191 (53.40%), Query Frame = -1 Query: 305 SFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESA---------GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKV---VAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPS---IVHRKC 832 S+ +R ++ + KE + + + + AK SS K +E PDG G ERFR E+LF PS SA G+HE Y SI+ CD ++R L NIV++GG+++ PG+++R+ E+ LA S +I V +VW GGSILASL FQ +W++K EYDE G V ++C Sbjct: 243 SYEIFQKRRVIEEWKESVLDVL---DTPFDEAKASSRNPKPFEFPDGVTHKFGQERFRISEILFNPSFSASRSAETTPPQGSVGLHELVYQSILACDSELRSPLLNNIVVTGGTSLIPGLSERLQAEVQRLATGS-RINVHTAETASATSNAVWFGGSILASLDNFQHLWVSKQEYDEVGVDRALFVEKRC 429
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: CT134_HUMAN (Putative uncharacterized actin family protein C20orf134 OS=Homo sapiens GN=C20orf134 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.625e-27 Identity = 67/204 (32.84%), Postives = 117/204 (57.35%), Query Frame = -1 Query: 314 AILRLDLAGRDLTDALMKILTERGYSFTTTA-EREIVRDMKEKLAYIALDYEQEL-ETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAP----SSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVH 907 A RL++AG L+ L +L A R+ + +K++ Y++LD+E +L + A+ A S+ + +G + + +ERFRCPE +FQP ++G G+ + ++ K +R L +VL+GGST+FPG A+R+ KE+ A ++++ +VA R +VW GGS++ASL +FQ+ WI ++ Y E G +++ Sbjct: 41 ATFRLNVAGSTLSRYLRDLLVAANPDLLQQALPRKAITHLKKRSCYVSLDFEGDLRDPARHHPA---SFSVGNGCCVCLSSERFRCPEPIFQPGLLGQAEQGLPALAFRALQKMPKTLRTRLADTVVLAGGSTLFPGFAERLDKELEAQCRRHGYAALRPHLVAKHGRGMAVWTGGSMVASLHSFQRRWITRAMYQECGSRLLY 241
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: CT134_MOUSE (Putative uncharacterized actin family protein C20orf134 homolog OS=Mus musculus PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.301e-26 Identity = 72/209 (34.45%), Postives = 119/209 (56.94%), Query Frame = -1 Query: 317 AILRLDLAG-------RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQEL-ETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAP----SSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIV 907 A RL++AG RDL A L +G S R+ V +K++ Y++LD++ ++ + A+ A + L +G + +G+ERFRCPE +FQPS++G G+ + ++ K +R L +VL+GGST+FPG +RM+ E+ A +++ +VA P R +VW GGS++ASL++FQ W+ ++ Y E GP +V Sbjct: 142 ATFRLNVAGSTLSRYFRDLLVAACPDLQLQGLS------RKTVTQLKKRCCYVSLDFQGDICDPARHQRAC---FCLGNGCYVRLGSERFRCPEPIFQPSLLGHPEPGLPTLAFQALQKIPTTLRTRLANTVVLAGGSTLFPGFVERMNLELEAQCRRHGYPALQPCLVAHPGRDTAVWTGGSMMASLNSFQCRWMTRAMYQEHGPLLV 341
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP4_USTMA (Actin-related protein 4 OS=Ustilago maydis GN=ARP4 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.301e-26 Identity = 78/220 (35.45%), Postives = 110/220 (50.00%), Query Frame = -1 Query: 305 SFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMI-----------------------------------------GMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAP---PERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKC 832 SF + +V D KE +A + L+ + + A+ S + YE PDG G ER R EVLF P++ G + G+ + +SI DVD R LYGNIVL GGS++ G++DR+S E+ AP+ KIK+ +P ER++S W+G SILASL TF Q+WI+K EY+E G +IVH +C Sbjct: 318 SFRSYHINRVVNDFKESVAQV-LEVPWDDQQAQFRSG--RMYEFPDGYNDAFGVERLRAAEVLFTPALWNGVSSSESFGAVLHASSQPSSEAGAVNGGSVSAAGATSVAGGKAAIGLADMVLSSINAVDVDSRPSLYGNIVLVGGSSLIQGLSDRLSYELGVKAPNQ-KIKIHSPGNTTERRHSSWLGASILASLGTFHQLWISKQEYEEHGAAIVHARC 533
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP7_ORYSJ (Actin-related protein 7 OS=Oryza sativa subsp. japonica GN=ARP7 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 2.897e-26 Identity = 76/205 (37.07%), Postives = 108/205 (52.68%), Query Frame = -1 Query: 302 RLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPE------RKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 898 R D+ G DLT+ + L + S + V +KE+ A A D Q A SS + + LPDGQVITI ER+ E LFQP ++G+E GI S+ + + L N +L GG+ G DR +E + L+ S++ +V PPE +YS W+GG+ILA + Q + K +YDE+GPSIVH+KCF Sbjct: 161 RFDIGGTDLTNLFAEELKKSNSS--VNIDISDVERLKEQYACCAED--QMAFEAIGSSCRPERHTLPDGQVITIEKERYIVGEALFQPHILGLEDYGIVHQLVTSVSNVTPEYHRQLLENTMLCGGTASMTGFEDRFQREAN-LSASAICPSLVKPPEYMPENLARYSAWLGGAILAKVVFPQNQHVTKGDYDETGPSIVHKKCF 360
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP7_ORYSI (Actin-related protein 7 OS=Oryza sativa subsp. indica GN=ARP7 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 2.897e-26 Identity = 76/205 (37.07%), Postives = 108/205 (52.68%), Query Frame = -1 Query: 302 RLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPE------RKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 898 R D+ G DLT+ + L + S + V +KE+ A A D Q A SS + + LPDGQVITI ER+ E LFQP ++G+E GI S+ + + L N +L GG+ G DR +E + L+ S++ +V PPE +YS W+GG+ILA + Q + K +YDE+GPSIVH+KCF Sbjct: 161 RFDIGGTDLTNLFAEELKKSNSS--VNIDISDVERLKEQYACCAED--QMAFEAIGSSCRPERHTLPDGQVITIEKERYIVGEALFQPHILGLEDYGIVHQLVTSVSNVTPEYHRQLLENTMLCGGTASMTGFEDRFQREAN-LSASAICPSLVKPPEYMPENLARYSAWLGGAILAKVVFPQNQHVTKGDYDETGPSIVHKKCF 360
BLAST of CX069436 vs. ExPASy Swiss-Prot
Match: ARP3_CAEBR (Actin-related protein 3 OS=Caenorhabditis briggsae GN=arx-1 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.455e-26 Identity = 72/220 (32.73%), Postives = 113/220 (51.36%), Query Frame = -1 Query: 320 ILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQ--------VITIGAERFRCPEVLFQPSMIGME-SAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALA----------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSI 904 I + +AGRD+T + +L ER ++ E+ + +KEK Y+ D +E T S+ K DG + +G ERF PE+ F P + + I +T I +C +D+R+ LY NIVLSGGSTMF A ++ +++ L+ P + ++V++ ++Y+VW GGS+LAS S F Q+ +K+EY E GPSI Sbjct: 198 IKHIPIAGRDITYFIQNLLREREHTIPAEQSYEVAKTIKEKFCYVCPDVMKEFVKYDTDSS--KWLRTYDGINSITKRPFSVDVGYERFLGPEIFFHPEFCNPDFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDARLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHSKAEYMEKGPSI 415 The following BLAST results are available for this feature:
BLAST of CX069436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069436 ID=CX069436; Name=CX069436; organism=Citrus sinensis; type=EST; length=913bpback to top |