DR403840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD31_ORYSJ (Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.752e-23 Identity = 58/98 (59.18%), Postives = 73/98 (74.49%), Query Frame = 3 Query: 441 LSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDTKFVFEAKTIQRMEILVLS 734 L RS+A+DW+ KV+ Y F LTA+L+VNYLDRFL F L +++ M QL AVA LSLAAK+EET VP LDLQV D K+VFE +TI+RME+ VL+ Sbjct: 86 LVAVRSDAIDWIWKVHELYKFGPLTAVLSVNYLDRFLSVFDLPQEEACMTQLLAVASLSLAAKMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVLN 183
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD41_ARATH (Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23 Identity = 55/98 (56.12%), Postives = 72/98 (73.47%), Query Frame = 3 Query: 441 LSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDTKFVFEAKTIQRMEILVLS 734 L+ R +A++W+ K + F L LA+NYLDRFL L K W+ QL AVACLSLAAK+EET+VP+L+DLQV D +FVFEAK++QRME+LVL+ Sbjct: 74 LNVGRRDALNWIWKACEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRMELLVLN 171
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD11_ORYSJ (Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.190e-22 Identity = 53/92 (57.61%), Postives = 69/92 (75.00%), Query Frame = 3 Query: 456 SEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDTKFVFEAKTIQRMEILVL 731 SE+V W+LKV + + F TA LAV+Y+DRF+ S L D W +QL VACLSLAAK+EE+ P LLDLQ+E T+F+FE +TIQRME++VL Sbjct: 126 SESVSWILKVRSVHGFQPATAYLAVSYMDRFMSSRSLP-DHGWASQLLCVACLSLAAKMEESSAPPLLDLQIEGTRFIFEPRTIQRMELIVL 216
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD32_ORYSJ (Cyclin-D3-2 OS=Oryza sativa subsp. japonica GN=CYCD3-2 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.576e-21 Identity = 58/103 (56.31%), Postives = 73/103 (70.87%), Query Frame = 3 Query: 450 ARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQR-DKPWMAQLAAVACLSLAAKVEETQVPLLLDLQV-------EDTKFVFEAKTIQRMEILVLS 734 AR AV W L+ A F+ALTA LAV YLDR L+ D+PWMA+LAAVAC++LAAKVEET+VP+LLDLQ+ + +VFE KT++RME+LVLS Sbjct: 77 AREAAVGWALRAVARLGFSALTAALAVAYLDRCFLGGALRLGDRPWMARLAAVACVALAAKVEETRVPVLLDLQLCAAERADPNEAYVFEDKTVRRMELLVLS 179
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD12_ORYSJ (Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.494e-21 Identity = 61/139 (43.88%), Postives = 85/139 (61.15%), Query Frame = 3 Query: 345 EQDLSWQDDELSTLLSKEV----------PNRLYNILKTNPSLSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDTKFVFEAKTIQRMEILVL 731 E++ W D ++ L+ E P RL + P+ AR+++V W+LKV Y +TA LAV+Y+DRFL +L + W QL AV CLSLAAK+EET VP +LDLQ+ED +++FE +TI RME+LVL Sbjct: 73 EEEEVWTVDVVAELIGGEAERSHSPRADYPGRLRS---GRPADLAARADSVAWILKVRELYGMLPVTAYLAVSYMDRFLSLHRLPGNG-WAMQLLAVTCLSLAAKMEETLVPSILDLQMEDARYIFEHRTIFRMELLVL 207
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD42_ARATH (Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.344e-20 Identity = 52/94 (55.32%), Postives = 62/94 (65.96%), Query Frame = 3 Query: 453 RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDTKFVFEAKTIQRMEILVLS 734 R +A+ W+ K F L LA+NYLDRFL L K W QL AVACLSLAAK+EET VP L+ LQV FVFEAK++QRME+LVL+ Sbjct: 69 RIQALGWIWKACEELQFGPLCICLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEAKSVQRMELLVLN 162
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD53_ORYSJ (Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.910e-16 Identity = 45/99 (45.45%), Postives = 66/99 (66.67%), Query Frame = 3 Query: 441 LSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDTKFVFEAKTIQRMEILVLST 737 + AR+ V W++K NA + F+ TA +AV YLDRFL + RDK W QL +VACLSLAAKVEE + P L + +++ +++ ++ RME+LVL+T Sbjct: 96 MKNARAWCVGWIVKTNAGFRFSLKTAYVAVTYLDRFLARRCVDRDKEWALQLLSVACLSLAAKVEERRPPRLPEFKLD----MYDCASLMRMELLVLTT 190
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD51_ARATH (Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.048e-14 Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 3 Query: 366 DDELSTLLSKEVPNRLYNILKTNPSLSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFS--FQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDTKFVFEAKTIQRMEILVLST 737 +D ++ L+ KE N + L + + S R A+DW+L + F TA +A++Y D FL LQ+D+ W +L +VACLSLAAK+EE VP L +D FVF+ I++ E+L+LST Sbjct: 45 EDYVADLVLKE--NLRFETLPSKTTSSSDRLIAIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKDETWAMRLLSVACLSLAAKMEERIVPGLSQYP-QDHDFVFKPDVIRKTELLILST 167
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD52_ORYSJ (Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.977e-13 Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 3 Query: 447 RARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDK-PWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDTKFVFEAKTIQRMEILVLST 737 +AR AV W+L+ ++ F TA LA+ Y DRF ++ R+ PW A+L ++AC+S+AAK+EE Q P L + + VF + +I+RME+LVLST Sbjct: 98 QARLAAVKWILETRGYFGFGHRTAYLAIAYFDRFCLRRRVDREAMPWAARLLSIACVSVAAKMEEYQSPALSEFDAGGGR-VFCSDSIRRMELLVLST 194
BLAST of DR403840 vs. ExPASy Swiss-Prot
Match: CCD51_ORYSJ (Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.404e-13 Identity = 44/99 (44.44%), Postives = 58/99 (58.59%), Query Frame = 3 Query: 450 ARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRD-KPWMAQLAAVACLSLAAKVEETQVPLLLDLQ--VEDTKFVFEAKTIQRMEILVLST 737 AR V W+L+ + F TA LA+ Y DRF + R PW A+L AVAC+SLAAK+EE + P L + + V D + F I+RME+LVLST Sbjct: 108 ARRATVKWILETRGCFGFCHRTAYLAIAYFDRFCLRRCIDRSVMPWAARLLAVACVSLAAKMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLST 206 The following BLAST results are available for this feature:
BLAST of DR403840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403840 ID=DR403840; Name=DR403840; organism=Citrus sinensis; type=EST; length=738bpback to top |