CX069433
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL3B_XENLA (Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.970e-38 Identity = 93/229 (40.61%), Postives = 136/229 (59.39%), Query Frame = -2 Query: 246 LSKYSGRRLMWQNSLGHCVLKAEFPKGKKE----------------------LAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGK--VRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 848 L+K+SGR+L Q+ +G L A F K+ L VS FQ +LMLFN+ +K +F++I+ T I ++EL R LQSLACGK RVL K PK +++E F N+ FT+ L+R+K+ + K E+ E T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F P +KKRIE LI+REYL R + ++Y Y+A Sbjct: 540 LAKHSGRQLTLQHHMGSADLNATFYGAVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL3A_XENLA (Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.491e-38 Identity = 94/229 (41.05%), Postives = 137/229 (59.83%), Query Frame = -2 Query: 246 LSKYSGRRLMWQNSLGHCVLKAEF--PKGKKE--------------------LAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGK--VRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMK--ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLK--FPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 848 L+K+SGR+L Q+ +G L A F P K++ L VS FQ +LMLFN+ K +F++I+ T I ++EL R LQSLACGK RVL K PK +++E F N+ FT+ L+R+K+ + K E+ E T ++V DR+++++AAIVRIMK+RK + H +L+ E+ QQLK F P +KKRIE LI+REYL R + ++Y Y+A Sbjct: 540 LAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL1_ARATH (Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.477e-38 Identity = 88/202 (43.56%), Postives = 121/202 (59.90%), Query Frame = -2 Query: 246 SKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKP--ADLKKRIESLIDREYLERDKNNPQIYNYLA 845 +K R+L W SLG C + +F + EL VS +Q VL+LFN KLS+ +I + ++L R L SL+C K ++L K P + V +D+F FN FT + RIK+ V+E E V +DR+Y +DAAIVRIMK+RKVL H L++E +QL KP +KKR+E LI R+YLERDK NP ++ YLA Sbjct: 541 TKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKLSYTEILAQLNLSHEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPL----PPVDERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 738
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL4_CAEEL (Cullin-4 OS=Caenorhabditis elegans GN=cul-4 PE=1 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 7.176e-37 Identity = 84/210 (40.00%), Postives = 126/210 (60.00%), Query Frame = -2 Query: 246 KYSGRRLMWQNSLGHCVLKAEFPKG-KKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACG--KVRVLQKLPKGRDVEDD--------DSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 842 ++ R + W + L V+ A F G KKEL +++QTV+L+LFN + + +I + T I + E+ + + +L G K +VLQ++ G + + + FV N FT R+++ + +K VEE E V DRQY++DAA+VRIMK RK L+H L+TEL QQL+FP+ AD+KKR+ESLI+REY+ RD YNY+A Sbjct: 631 QHGNRNVKWHHGLASAVISASFRPGCKKELIATMYQTVILLLFNKCETWTVAEIVEHTKILEIEVVKNVLALLGGRDKPKVLQRVEGGGSEKKEGTVENLKNEKFVVNSKFTEKRCRVRIAQVNIKTAVEETKEVKEEVNSDRQYKIDAAVVRIMKARKQLNHQTLMTELLQQLRFPVSTADIKKRLESLIEREYISRDPEEASSYNYVA 840
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL3_CAEEL (Cullin-3 OS=Caenorhabditis elegans GN=cul-3 PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 3.814e-30 Identity = 88/232 (37.93%), Postives = 129/232 (55.60%), Query Frame = -2 Query: 246 KYSGRRLMWQNSLGHCVLKAEF---PKGK------------------------KELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKV--RVLQKLPKGRDVED-DDSFVFNEGFTAPLYRIKVNAIQMK-ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQL--KFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 842 K++GR+L LG+ +KA F PK K L V+ Q ++L+ FN ++S Q + D I ++EL+R LQSLA GK R+L + KG+D D D F N+ F + L R+KV + K E+ E T ++V DR+ +V+AAIVRIMK RK L+H L+ E+ QQL +F P +K+RIE+LI+REYL RD+++ + Y Y+A Sbjct: 546 KHTGRKLTINTLLGNADVKATFYPPPKASMSNEENGPGPSSSGESMKERKPEHKILQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLALGKASQRILVRKNKGKDAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHDHRAYQYIA 777
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL2_PONAB (Cullin-2 OS=Pongo abelii GN=CUL2 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.959e-26 Identity = 70/201 (34.83%), Postives = 121/201 (60.20%), Query Frame = -2 Query: 246 YSGRRLMWQNSLGHCVLKAEFPKGKKELA-VSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKP--ADLKKRIESLIDREYLERDKNNPQIYNYLA 839 +SGR+L W + L +K + GK +A V+ +Q VL+ FN+++ +S+++++D+T + +KEL +T++SL V+++ + D++ + SF N F++ + K+ K+T +E T V +DR+ + AAIVRIMK RKVL H LI E+ Q + P + +KK IE LID++Y+ER + + Y+Y+A Sbjct: 548 FSGRKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLL--DVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL2_HUMAN (Cullin-2 OS=Homo sapiens GN=CUL2 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.959e-26 Identity = 70/201 (34.83%), Postives = 121/201 (60.20%), Query Frame = -2 Query: 246 YSGRRLMWQNSLGHCVLKAEFPKGKKELA-VSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKP--ADLKKRIESLIDREYLERDKNNPQIYNYLA 839 +SGR+L W + L +K + GK +A V+ +Q VL+ FN+++ +S+++++D+T + +KEL +T++SL V+++ + D++ + SF N F++ + K+ K+T +E T V +DR+ + AAIVRIMK RKVL H LI E+ Q + P + +KK IE LID++Y+ER + + Y+Y+A Sbjct: 548 FSGRKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLL--DVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL2_MOUSE (Cullin-2 OS=Mus musculus GN=Cul2 PE=1 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 2.558e-26 Identity = 70/201 (34.83%), Postives = 121/201 (60.20%), Query Frame = -2 Query: 246 YSGRRLMWQNSLGHCVLKAEFPKGKKELA-VSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKP--ADLKKRIESLIDREYLERDKNNPQIYNYLA 839 +SGR+L W + L +K + GK +A V+ +Q VL+ FN+++ +S+++++D+T + +KEL +T++SL V+++ + D++ + SF N F++ + K+ K+T +E T V +DR+ + AAIVRIMK RKVL H LI E+ Q + P + +KK IE LID++Y+ER + + Y+Y+A Sbjct: 548 FSGRKLTWLHYLCTGEVKMNY-LGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSLL--DVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQKDTPQELEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 745
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL1_DICDI (Cullin-1 OS=Dictyostelium discoideum GN=culA PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.716e-22 Identity = 70/205 (34.15%), Postives = 114/205 (55.61%), Query Frame = -2 Query: 246 SKYSGRRLMWQNSLGHCVLKAEFPKGKKE---LAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQL--KFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 845 +++SGR+L W + L LK ++ + K L S +Q VL+ FN + L+ ++I+++T + D L+ TL SLA K+ + ++ F N+ F +I +N + + EE S + V +DR+ Q+ AAIVRIMK RK L+H+ L+TE+ QL +F K +KK I+ LI++EYL R + Y+Y+A Sbjct: 566 NQHSGRKLNWLHHLSKGELKTKYLQTSKSGYTLQCSTYQIGVLLQFNQYETLTSEEIQESTQLIDSVLKGTLTSLAKSKILLADPPLDDEEIAKTTKFSLNKQFKNKKTKIFINVPVLTQVKEEIDSIHKTVEEDRKLQIQAAIVRIMKMRKQLAHSGLMTEVISQLQTRFNPKVNIIKKCIDILIEKEYLMRVEGKKDHYSYVA 770
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL1_PONAB (Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.236e-21 Identity = 69/205 (33.66%), Postives = 102/205 (49.76%), Query Frame = -2 Query: 246 SKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACGKVRVLQKLPKGRD---VEDDDSFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKP--ADLKKRIESLIDREYLERDKNNPQIYNYLA 845 S++SGR+L W L L K + L S FQ +L+ +N + Q + D+T I+ L + LQ L K+ VL+ D ++ D G+ R+ +N E +E +T + + +DR+ + AAIVRIMK RKVL H L+ E+ QL KP +KK I+ LI++EYLER Y+YLA Sbjct: 572 SRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA 776 The following BLAST results are available for this feature:
BLAST of CX069433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069433 ID=CX069433; Name=CX069433; organism=Citrus sinensis; type=EST; length=849bpback to top |