CX069433
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL5_RAT (Cullin-5 OS=Rattus norvegicus GN=Cul5 PE=1 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 4.094e-16 Identity = 69/215 (32.09%), Postives = 112/215 (52.09%), Query Frame = -2 Query: 246 YSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDA--QKLSFQDIKDATGIEDKELRRTLQSLACG---KVRVLQKLPK---GRDVEDDDSFVFNEGFT-----APLYRIKVNAIQMKETVEE--NTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERDKNNPQIYNYLA 839 +SGR+L W + + + ++ + G+ +L V+ FQ VL +N +K+SF+++K AT + D ELRRTL SL K +VL P+ +D + F N+ F+ R K+N I + E E + Q R + AI++IMK RK +S+ L TEL + LK P +K++IE LI+ +Y+ RD+ + + Y+A Sbjct: 566 HSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTFIYMA 780
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL5_MOUSE (Cullin-5 OS=Mus musculus GN=Cul5 PE=1 SV=3) HSP 1 Score: 83.9593 bits (206), Expect = 1.191e-15 Identity = 68/215 (31.63%), Postives = 111/215 (51.63%), Query Frame = -2 Query: 246 YSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDA--QKLSFQDIKDATGIEDKELRRTLQSLACG---KVRVLQKLPK---GRDVEDDDSFVFNEGFT-----APLYRIKVNAIQMKETVEE--NTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERDKNNPQIYNYLA 839 +SGR+L W + + + ++ + G+ +L V+ FQ VL +N +K+SF+++K AT + D ELRRTL SL K +VL P+ +D + F N+ F+ R K+N I + E E + Q R + AI++IMK RK +S+ L TEL + LK P +K+++E LI+ Y+ RD+ + + Y+A Sbjct: 566 HSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQMEWLIEHRYIRRDEADINTFIYMA 780
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL3_YEAST (Cullin-3 OS=Saccharomyces cerevisiae GN=CUL3 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.191e-15 Identity = 57/207 (27.54%), Postives = 108/207 (52.17%), Query Frame = -2 Query: 246 KYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLA-CGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAI-----QMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLI--TELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 842 KY R L W + L + +F G E++ S++ V+ +LF D ++L+ +I + T I +++ + S++ + ++L+K +++ F N F++P ++KV I K S+ + + ++ A IVRIMKT LSH L+ T Q + + P+ LK+ I+ LI++EY++R+ ++P Y+YL+ Sbjct: 542 KYKERVLKWAHHLSVIEIGCQFNSGYYEISFSVYAGVIFLLFEDYEELTLGEIYELTHIPIDDVKSLVMSMSTIPRCKILKKSSSSGNMK----FSVNYFFSSPNRKVKVPVIACPLPSQKSDNLATASSVDTYDNEIVMELSAIIVRIMKTEGKLSHQQLLERTTKRTQSRLSLTPSILKRSIQLLIEKEYIQRNADDPSYYHYLS 744
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CUL5_RABIT (Cullin-5 OS=Oryctolagus cuniculus GN=CUL5 PE=2 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 4.526e-15 Identity = 67/215 (31.16%), Postives = 111/215 (51.63%), Query Frame = -2 Query: 246 YSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDA--QKLSFQDIKDATGIEDKELRRTLQSLACG---KVRVLQKLPK---GRDVEDDDSFVFNEGFT-----APLYRIKVNAIQMKETVEE--NTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPAD--LKKRIESLIDREYLERDKNNPQIYNYLA 839 +SGR+L W + + + ++ + G+ +L V+ FQ VL +N +K+SF+++K AT + D ELRRTL SL K +VL P+ +D + F N+ F+ R K+N I + E E + Q R + ++IMK RK +S+ L TEL + LK P +K++IE LI+ +Y+ RD+++ + Y+A Sbjct: 566 HSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTRKLYIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
BLAST of CX069433 vs. ExPASy Swiss-Prot
Match: CDC53_YEAST (Cell division control protein 53 OS=Saccharomyces cerevisiae GN=CDC53 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.244e-13 Identity = 66/231 (28.57%), Postives = 114/231 (49.35%), Query Frame = -2 Query: 246 KYSGRRLMWQNSLGHCVLKAEFPKGKK---ELAVSLFQTVVLMLFNDAQKLSFQDIKDATGIEDKELRRTLQSLACG-----KVRVLQKLPKGRD--VEDDDSFVFNEGFTAPLYRI------KVNAIQM--------------KETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQ--LKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA 842 K++GR L W L LKA+ K + V+LFQ +L+L+NDA L+ ++I++ T + T+Q +A K +++Q++P G D V+ + F + + A I K + +Q + + E+ + + +RQ ++A IVRIMK ++ L HT L+ E Q +F K + +K+ I+SLI + YL+R ++ + Y YLA Sbjct: 593 KHNGRILKWLWPLCRGELKADIGKPGRMPFNFTVTLFQMAILLLYNDADVLTLENIQEGTSL-------TIQHIAAAMVPFIKFKLIQQVPPGLDALVKPETQFKLSRPYKALKTNINFASGVKNDILQSLSGGGHDNHGNKLGNKRLTEDERIEKELNTERQIFLEACIVRIMKAKRNLPHTTLVNECIAQSHQRFNAKVSMVKRAIDSLIQKGYLQRG-DDGESYAYLA 815 The following BLAST results are available for this feature:
BLAST of CX069433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069433 ID=CX069433; Name=CX069433; organism=Citrus sinensis; type=EST; length=849bpback to top |